EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000019371 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7059 bases
Position: chrBDQW01000073.1:2335413-2342471
Accession: 111220573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000026711	KH_1	PF00013.29	3.5e-38	1	2
ENSSDUP00000026711	KH_1	PF00013.29	3.5e-38	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000027190	-	1848	XM_022743690	ENSSDUP00000026711	345 (aa)	XP_022599411	-

Gene Model

Click here to download ENSSDUG00000019371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000019371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000019371	zgc:110045	66	69.604	ENSSDUG00000018636	PCBP2	93	68.644
ENSSDUG00000019371	zgc:110045	99	52.846	ENSSDUG00000015540	-	84	52.561
ENSSDUG00000019371	zgc:110045	66	67.521	ENSSDUG00000021325	pcbp2	70	67.521
ENSSDUG00000019371	zgc:110045	70	66.529	ENSSDUG00000008502	-	73	66.529
ENSSDUG00000019371	zgc:110045	65	67.347	ENSSDUG00000011608	pcbp3	74	67.347
ENSSDUG00000019371	zgc:110045	99	52.926	ENSSDUG00000017719	pcbp4	86	54.133
ENSSDUG00000019371	zgc:110045	92	42.188	ENSSDUG00000020704	nova1	65	42.188

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000019371	zgc:110045	66	75.439	ENSG00000183570	PCBP3	80	75.439	Homo_sapiens
ENSSDUG00000019371	zgc:110045	66	98.678	ENSAPOG00000023735	zgc:110045	93	98.678	Acanthochromis_polyacanthus
ENSSDUG00000019371	zgc:110045	66	96.875	ENSACIG00000002577	zgc:110045	92	96.875	Amphilophus_citrinellus
ENSSDUG00000019371	zgc:110045	100	98.261	ENSAPEG00000000729	zgc:110045	96	98.261	Amphiprion_percula
ENSSDUG00000019371	zgc:110045	100	92.464	ENSATEG00000011191	zgc:110045	100	92.464	Anabas_testudineus
ENSSDUG00000019371	zgc:110045	100	96.812	ENSACLG00000019285	zgc:110045	97	96.812	Astatotilapia_calliptera
ENSSDUG00000019371	zgc:110045	66	75.439	ENSBTAG00000030775	PCBP3	80	75.439	Bos_taurus
ENSSDUG00000019371	zgc:110045	66	69.636	ENSCAFG00000011907	PCBP3	81	69.636	Canis_familiaris
ENSSDUG00000019371	zgc:110045	66	69.355	ENSCHIG00000015841	PCBP3	66	69.355	Capra_hircus
ENSSDUG00000019371	zgc:110045	86	64.557	ENSTSYG00000005254	PCBP3	65	64.557	Carlito_syrichta
ENSSDUG00000019371	zgc:110045	66	67.078	ENSCAPG00000006767	PCBP3	65	67.078	Cavia_aperea
ENSSDUG00000019371	zgc:110045	66	69.355	ENSCPOG00000003648	PCBP3	81	69.355	Cavia_porcellus
ENSSDUG00000019371	zgc:110045	66	75.000	ENSCCAG00000024561	PCBP3	80	75.000	Cebus_capucinus
ENSSDUG00000019371	zgc:110045	66	75.439	ENSCATG00000038419	PCBP3	80	75.439	Cercocebus_atys
ENSSDUG00000019371	zgc:110045	66	69.355	ENSCLAG00000006667	PCBP3	81	69.355	Chinchilla_lanigera
ENSSDUG00000019371	zgc:110045	66	75.439	ENSCANG00000026757	PCBP3	80	75.439	Colobus_angolensis_palliatus
ENSSDUG00000019371	zgc:110045	66	69.355	ENSCGRG00001006836	Pcbp3	81	69.355	Cricetulus_griseus_chok1gshd
ENSSDUG00000019371	zgc:110045	66	69.355	ENSCGRG00000001837	Pcbp3	81	69.355	Cricetulus_griseus_crigri
ENSSDUG00000019371	zgc:110045	100	94.203	ENSCSEG00000010020	zgc:110045	96	94.203	Cynoglossus_semilaevis
ENSSDUG00000019371	zgc:110045	66	93.333	ENSCVAG00000004726	zgc:110045	87	93.333	Cyprinodon_variegatus
ENSSDUG00000019371	zgc:110045	66	69.355	ENSDNOG00000049518	PCBP3	82	69.355	Dasypus_novemcinctus
ENSSDUG00000019371	zgc:110045	77	66.897	ENSDORG00000003640	Pcbp3	59	66.897	Dipodomys_ordii
ENSSDUG00000019371	zgc:110045	66	75.000	ENSEASG00005007068	PCBP3	80	75.000	Equus_asinus_asinus
ENSSDUG00000019371	zgc:110045	66	75.000	ENSECAG00000012413	PCBP3	80	75.000	Equus_caballus
ENSSDUG00000019371	zgc:110045	100	83.333	ENSELUG00000019784	zgc:110045	96	83.333	Esox_lucius
ENSSDUG00000019371	zgc:110045	66	75.000	ENSFCAG00000014812	PCBP3	80	75.000	Felis_catus
ENSSDUG00000019371	zgc:110045	66	75.000	ENSFDAG00000009117	PCBP3	80	75.000	Fukomys_damarensis
ENSSDUG00000019371	zgc:110045	66	97.321	ENSFHEG00000018838	-	86	97.321	Fundulus_heteroclitus
ENSSDUG00000019371	zgc:110045	66	91.304	ENSGMOG00000005953	zgc:110045	70	91.304	Gadus_morhua
ENSSDUG00000019371	zgc:110045	75	85.714	ENSGAFG00000017860	-	100	85.714	Gambusia_affinis
ENSSDUG00000019371	zgc:110045	66	96.124	ENSGAFG00000017864	zgc:110045	90	96.124	Gambusia_affinis
ENSSDUG00000019371	zgc:110045	66	97.357	ENSGACG00000003044	zgc:110045	70	97.357	Gasterosteus_aculeatus
ENSSDUG00000019371	zgc:110045	66	75.439	ENSGGOG00000003683	PCBP3	80	75.439	Gorilla_gorilla
ENSSDUG00000019371	zgc:110045	66	98.238	ENSHBUG00000012495	zgc:110045	93	98.238	Haplochromis_burtoni
ENSSDUG00000019371	zgc:110045	66	69.355	ENSHGLG00000018620	PCBP3	81	69.355	Heterocephalus_glaber_female
ENSSDUG00000019371	zgc:110045	66	69.355	ENSHGLG00100013590	PCBP3	81	69.355	Heterocephalus_glaber_male
ENSSDUG00000019371	zgc:110045	66	75.610	ENSHCOG00000000818	zgc:110045	88	73.478	Hippocampus_comes
ENSSDUG00000019371	zgc:110045	66	69.355	ENSSTOG00000007178	PCBP3	81	69.355	Ictidomys_tridecemlineatus
ENSSDUG00000019371	zgc:110045	66	69.758	ENSJJAG00000021192	Pcbp3	81	69.758	Jaculus_jaculus
ENSSDUG00000019371	zgc:110045	100	82.029	ENSKMAG00000016179	-	92	96.429	Kryptolebias_marmoratus
ENSSDUG00000019371	zgc:110045	66	86.066	ENSLBEG00000023074	zgc:110045	93	86.066	Labrus_bergylta
ENSSDUG00000019371	zgc:110045	66	75.877	ENSLAFG00000020835	PCBP3	93	75.877	Loxodonta_africana
ENSSDUG00000019371	zgc:110045	66	75.439	ENSMFAG00000034574	PCBP3	80	75.439	Macaca_fascicularis
ENSSDUG00000019371	zgc:110045	66	75.439	ENSMMUG00000003825	PCBP3	80	75.439	Macaca_mulatta
ENSSDUG00000019371	zgc:110045	66	75.439	ENSMNEG00000035551	PCBP3	88	75.439	Macaca_nemestrina
ENSSDUG00000019371	zgc:110045	66	75.439	ENSMLEG00000038785	PCBP3	80	75.439	Mandrillus_leucophaeus
ENSSDUG00000019371	zgc:110045	65	98.222	ENSMAMG00000014389	zgc:110045	90	98.222	Mastacembelus_armatus
ENSSDUG00000019371	zgc:110045	100	96.812	ENSMZEG00005011785	zgc:110045	97	96.812	Maylandia_zebra
ENSSDUG00000019371	zgc:110045	66	69.355	ENSMAUG00000007036	Pcbp3	81	69.355	Mesocricetus_auratus
ENSSDUG00000019371	zgc:110045	66	75.439	ENSMICG00000012679	PCBP3	64	75.439	Microcebus_murinus
ENSSDUG00000019371	zgc:110045	66	69.355	ENSMOCG00000016127	Pcbp3	81	69.355	Microtus_ochrogaster
ENSSDUG00000019371	zgc:110045	74	93.717	ENSMMOG00000008398	-	100	93.717	Mola_mola
ENSSDUG00000019371	zgc:110045	73	91.327	ENSMALG00000008782	-	99	91.327	Monopterus_albus
ENSSDUG00000019371	zgc:110045	66	69.636	MGP_CAROLIEiJ_G0015475	Pcbp3	94	70.323	Mus_caroli
ENSSDUG00000019371	zgc:110045	66	69.636	ENSMUSG00000001120	Pcbp3	93	70.323	Mus_musculus
ENSSDUG00000019371	zgc:110045	66	69.636	MGP_PahariEiJ_G0030889	Pcbp3	94	70.323	Mus_pahari
ENSSDUG00000019371	zgc:110045	66	69.636	MGP_SPRETEiJ_G0016288	Pcbp3	94	70.323	Mus_spretus
ENSSDUG00000019371	zgc:110045	66	69.355	ENSMLUG00000003074	PCBP3	81	69.355	Myotis_lucifugus
ENSSDUG00000019371	zgc:110045	66	69.355	ENSNGAG00000005416	Pcbp3	81	69.355	Nannospalax_galili
ENSSDUG00000019371	zgc:110045	100	97.391	ENSNBRG00000017646	zgc:110045	97	97.391	Neolamprologus_brichardi
ENSSDUG00000019371	zgc:110045	66	75.439	ENSNLEG00000002639	PCBP3	80	75.439	Nomascus_leucogenys
ENSSDUG00000019371	zgc:110045	66	61.887	ENSMEUG00000012960	PCBP3	89	61.887	Notamacropus_eugenii
ENSSDUG00000019371	zgc:110045	66	69.355	ENSODEG00000012873	PCBP3	67	69.355	Octodon_degus
ENSSDUG00000019371	zgc:110045	100	91.304	ENSONIG00000010370	zgc:110045	97	91.304	Oreochromis_niloticus
ENSSDUG00000019371	zgc:110045	85	67.251	ENSOANG00000006265	PCBP3	81	67.251	Ornithorhynchus_anatinus
ENSSDUG00000019371	zgc:110045	100	91.594	ENSORLG00000014385	-	97	91.594	Oryzias_latipes
ENSSDUG00000019371	zgc:110045	100	90.435	ENSORLG00020003139	zgc:110045	97	91.304	Oryzias_latipes_hni
ENSSDUG00000019371	zgc:110045	100	92.174	ENSOMEG00000015459	-	97	92.174	Oryzias_melastigma
ENSSDUG00000019371	zgc:110045	66	66.260	ENSOARG00000012704	PCBP3	81	66.260	Ovis_aries
ENSSDUG00000019371	zgc:110045	66	75.439	ENSPPAG00000021940	PCBP3	80	75.439	Pan_paniscus
ENSSDUG00000019371	zgc:110045	66	75.000	ENSPPRG00000003933	PCBP3	80	75.000	Panthera_pardus
ENSSDUG00000019371	zgc:110045	66	60.173	ENSPTIG00000012038	PCBP3	63	60.965	Panthera_tigris_altaica
ENSSDUG00000019371	zgc:110045	64	65.657	ENSPTRG00000014010	PCBP3	69	55.696	Pan_troglodytes
ENSSDUG00000019371	zgc:110045	66	75.439	ENSPANG00000023631	PCBP3	80	75.439	Papio_anubis
ENSSDUG00000019371	zgc:110045	100	75.852	ENSPMGG00000021588	-	80	76.136	Periophthalmus_magnuspinnatus
ENSSDUG00000019371	zgc:110045	66	69.355	ENSPEMG00000000587	Pcbp3	81	69.355	Peromyscus_maniculatus_bairdii
ENSSDUG00000019371	zgc:110045	71	93.089	ENSPFOG00000002348	zgc:110045	97	93.089	Poecilia_formosa
ENSSDUG00000019371	zgc:110045	66	96.124	ENSPMEG00000012762	zgc:110045	90	96.124	Poecilia_mexicana
ENSSDUG00000019371	zgc:110045	100	91.594	ENSPREG00000001797	zgc:110045	96	91.594	Poecilia_reticulata
ENSSDUG00000019371	zgc:110045	51	64.975	ENSPPYG00000011525	-	71	64.975	Pongo_abelii
ENSSDUG00000019371	zgc:110045	65	62.738	ENSPCAG00000001454	PCBP3	76	62.738	Procavia_capensis
ENSSDUG00000019371	zgc:110045	66	75.439	ENSPCOG00000013797	PCBP3	75	65.779	Propithecus_coquereli
ENSSDUG00000019371	zgc:110045	75	95.918	ENSPNYG00000004656	-	98	95.918	Pundamilia_nyererei
ENSSDUG00000019371	zgc:110045	66	96.094	ENSPNYG00000004637	zgc:110045	92	96.094	Pundamilia_nyererei
ENSSDUG00000019371	zgc:110045	66	75.439	ENSRROG00000034567	PCBP3	80	75.439	Rhinopithecus_roxellana
ENSSDUG00000019371	zgc:110045	66	75.439	ENSSBOG00000005789	PCBP3	80	75.439	Saimiri_boliviensis_boliviensis
ENSSDUG00000019371	zgc:110045	100	96.232	ENSSMAG00000013541	zgc:110045	97	96.232	Scophthalmus_maximus
ENSSDUG00000019371	zgc:110045	100	99.710	ENSSLDG00000021064	zgc:110045	97	99.710	Seriola_lalandi_dorsalis
ENSSDUG00000019371	zgc:110045	66	99.119	ENSSPAG00000000563	zgc:110045	93	99.119	Stegastes_partitus
ENSSDUG00000019371	zgc:110045	66	75.000	ENSSSCG00000023041	PCBP3	80	75.000	Sus_scrofa
ENSSDUG00000019371	zgc:110045	66	93.636	ENSTRUG00000017789	zgc:110045	92	93.636	Takifugu_rubripes
ENSSDUG00000019371	zgc:110045	75	90.816	ENSTRUG00000023273	-	99	90.816	Takifugu_rubripes
ENSSDUG00000019371	zgc:110045	66	75.439	ENSUAMG00000006491	PCBP3	79	75.439	Ursus_americanus
ENSSDUG00000019371	zgc:110045	66	61.024	ENSUMAG00000025403	PCBP3	66	61.024	Ursus_maritimus
ENSSDUG00000019371	zgc:110045	66	67.500	ENSVVUG00000023862	PCBP3	74	62.550	Vulpes_vulpes
ENSSDUG00000019371	zgc:110045	67	83.000	ENSXCOG00000005968	zgc:110045	89	83.000	Xiphophorus_couchianus
ENSSDUG00000019371	zgc:110045	100	92.174	ENSXMAG00000008030	zgc:110045	97	92.174	Xiphophorus_maculatus