EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000019439 (Gene tree)
Gene ID: 111222926
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7694 bases
Position: chrBDQW01000109.1:1311992-1319685
Accession: 111222926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000026812	dsrm	PF00035.26	6.1e-47	1	4
ENSSDUP00000026812	dsrm	PF00035.26	6.1e-47	2	4
ENSSDUP00000026812	dsrm	PF00035.26	6.1e-47	3	4
ENSSDUP00000026812	dsrm	PF00035.26	6.1e-47	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000027289	-	3165	XM_022746842	ENSSDUP00000026812	691 (aa)	XP_022602563	UPI000BBED3B1

Gene Model

Click here to download ENSSDUG00000019439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000019439's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000019439	stau1	87	49.054	ENSSDUG00000012535	stau2	99	46.610

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000019439	stau1	96	72.948	ENSG00000124214	STAU1	99	75.649	Homo_sapiens
ENSSDUG00000019439	stau1	100	96.527	ENSAPOG00000017260	stau1	100	96.527	Acanthochromis_polyacanthus
ENSSDUG00000019439	stau1	96	71.343	ENSAMEG00000013681	STAU1	95	71.343	Ailuropoda_melanoleuca
ENSSDUG00000019439	stau1	100	93.343	ENSACIG00000015918	stau1	100	94.356	Amphilophus_citrinellus
ENSSDUG00000019439	stau1	100	97.685	ENSAOCG00000012224	stau1	100	97.685	Amphiprion_ocellaris
ENSSDUG00000019439	stau1	100	97.685	ENSAPEG00000012308	stau1	100	97.685	Amphiprion_percula
ENSSDUG00000019439	stau1	100	95.827	ENSATEG00000024600	stau1	100	95.827	Anabas_testudineus
ENSSDUG00000019439	stau1	99	71.409	ENSAPLG00000010527	STAU1	100	71.310	Anas_platyrhynchos
ENSSDUG00000019439	stau1	99	73.513	ENSACAG00000015909	STAU1	99	73.409	Anolis_carolinensis
ENSSDUG00000019439	stau1	93	71.956	ENSANAG00000032714	STAU1	99	71.058	Aotus_nancymaae
ENSSDUG00000019439	stau1	100	94.101	ENSACLG00000012270	stau1	100	94.101	Astatotilapia_calliptera
ENSSDUG00000019439	stau1	96	80.827	ENSAMXG00000016812	stau1	98	80.827	Astyanax_mexicanus
ENSSDUG00000019439	stau1	93	72.388	ENSBTAG00000000241	STAU1	95	72.388	Bos_taurus
ENSSDUG00000019439	stau1	96	72.761	ENSCJAG00000016233	STAU1	95	72.761	Callithrix_jacchus
ENSSDUG00000019439	stau1	93	72.298	ENSCAFG00000011347	STAU1	96	72.298	Canis_familiaris
ENSSDUG00000019439	stau1	93	72.298	ENSCAFG00020017123	STAU1	99	73.779	Canis_lupus_dingo
ENSSDUG00000019439	stau1	93	71.828	ENSCHIG00000001799	-	99	71.828	Capra_hircus
ENSSDUG00000019439	stau1	93	72.779	ENSTSYG00000036179	-	95	72.779	Carlito_syrichta
ENSSDUG00000019439	stau1	72	74.052	ENSCAPG00000017041	STAU1	99	73.852	Cavia_aperea
ENSSDUG00000019439	stau1	71	72.200	ENSCPOG00000005566	STAU1	99	72.200	Cavia_porcellus
ENSSDUG00000019439	stau1	93	71.956	ENSCCAG00000034339	STAU1	95	71.956	Cebus_capucinus
ENSSDUG00000019439	stau1	96	76.824	ENSCATG00000028474	STAU1	99	76.824	Cercocebus_atys
ENSSDUG00000019439	stau1	71	61.647	ENSCLAG00000002784	-	99	61.647	Chinchilla_lanigera
ENSSDUG00000019439	stau1	71	75.400	ENSCLAG00000006516	-	99	75.400	Chinchilla_lanigera
ENSSDUG00000019439	stau1	72	75.848	ENSCSAG00000014986	STAU1	99	75.848	Chlorocebus_sabaeus
ENSSDUG00000019439	stau1	96	73.184	ENSCHOG00000001511	STAU1	99	73.184	Choloepus_hoffmanni
ENSSDUG00000019439	stau1	99	73.191	ENSCPBG00000026741	STAU1	100	73.088	Chrysemys_picta_bellii
ENSSDUG00000019439	stau1	96	73.134	ENSCANG00000039220	STAU1	99	73.134	Colobus_angolensis_palliatus
ENSSDUG00000019439	stau1	71	71.200	ENSCGRG00001013453	Stau1	99	71.200	Cricetulus_griseus_chok1gshd
ENSSDUG00000019439	stau1	71	71.200	ENSCGRG00000007216	Stau1	99	71.200	Cricetulus_griseus_crigri
ENSSDUG00000019439	stau1	100	79.859	ENSCSEG00000000792	stau1	100	80.845	Cynoglossus_semilaevis
ENSSDUG00000019439	stau1	96	82.739	ENSCVAG00000005906	stau1	100	84.053	Cyprinodon_variegatus
ENSSDUG00000019439	stau1	100	81.385	ENSDARG00000044182	stau1	100	81.476	Danio_rerio
ENSSDUG00000019439	stau1	96	73.184	ENSDNOG00000014933	STAU1	97	72.998	Dasypus_novemcinctus
ENSSDUG00000019439	stau1	71	74.089	ENSDORG00000030220	Stau1	99	74.089	Dipodomys_ordii
ENSSDUG00000019439	stau1	67	77.152	ENSETEG00000018235	STAU1	82	77.152	Echinops_telfairi
ENSSDUG00000019439	stau1	96	71.344	ENSEASG00005023343	STAU1	99	71.344	Equus_asinus_asinus
ENSSDUG00000019439	stau1	93	73.725	ENSECAG00000012894	STAU1	98	73.057	Equus_caballus
ENSSDUG00000019439	stau1	65	78.426	ENSEEUG00000014344	STAU1	68	78.426	Erinaceus_europaeus
ENSSDUG00000019439	stau1	99	84.517	ENSELUG00000002529	stau1	99	85.938	Esox_lucius
ENSSDUG00000019439	stau1	96	73.321	ENSFCAG00000001447	STAU1	99	73.321	Felis_catus
ENSSDUG00000019439	stau1	99	73.143	ENSFALG00000012940	STAU1	100	73.039	Ficedula_albicollis
ENSSDUG00000019439	stau1	72	56.886	ENSFDAG00000020837	-	99	55.489	Fukomys_damarensis
ENSSDUG00000019439	stau1	71	74.600	ENSFDAG00000014119	-	99	74.600	Fukomys_damarensis
ENSSDUG00000019439	stau1	99	90.346	ENSFHEG00000013517	stau1	99	90.346	Fundulus_heteroclitus
ENSSDUG00000019439	stau1	100	74.334	ENSGMOG00000016850	stau1	100	74.334	Gadus_morhua
ENSSDUG00000019439	stau1	99	73.647	ENSGALG00000004736	STAU1	100	73.542	Gallus_gallus
ENSSDUG00000019439	stau1	99	91.066	ENSGAFG00000010437	stau1	99	91.066	Gambusia_affinis
ENSSDUG00000019439	stau1	100	93.208	ENSGACG00000001352	stau1	100	93.208	Gasterosteus_aculeatus
ENSSDUG00000019439	stau1	99	73.963	ENSGAGG00000009825	STAU1	100	73.857	Gopherus_agassizii
ENSSDUG00000019439	stau1	93	67.890	ENSGGOG00000025351	STAU1	99	78.297	Gorilla_gorilla
ENSSDUG00000019439	stau1	100	94.245	ENSHBUG00000023668	stau1	100	94.245	Haplochromis_burtoni
ENSSDUG00000019439	stau1	71	76.113	ENSHGLG00000008730	STAU1	99	76.113	Heterocephalus_glaber_female
ENSSDUG00000019439	stau1	71	76.113	ENSHGLG00100000098	STAU1	99	76.113	Heterocephalus_glaber_male
ENSSDUG00000019439	stau1	100	86.207	ENSHCOG00000018461	stau1	100	86.207	Hippocampus_comes
ENSSDUG00000019439	stau1	100	77.279	ENSIPUG00000023725	stau1	100	77.279	Ictalurus_punctatus
ENSSDUG00000019439	stau1	71	74.899	ENSSTOG00000003634	STAU1	99	74.899	Ictidomys_tridecemlineatus
ENSSDUG00000019439	stau1	71	74.089	ENSJJAG00000020032	Stau1	99	74.089	Jaculus_jaculus
ENSSDUG00000019439	stau1	99	88.278	ENSKMAG00000007135	stau1	99	88.857	Kryptolebias_marmoratus
ENSSDUG00000019439	stau1	100	94.211	ENSLBEG00000020172	stau1	100	94.211	Labrus_bergylta
ENSSDUG00000019439	stau1	98	74.212	ENSLACG00000016157	STAU1	97	74.212	Latimeria_chalumnae
ENSSDUG00000019439	stau1	99	78.386	ENSLOCG00000003134	stau1	100	78.993	Lepisosteus_oculatus
ENSSDUG00000019439	stau1	74	75.292	ENSLAFG00000003238	STAU1	99	75.292	Loxodonta_africana
ENSSDUG00000019439	stau1	96	76.824	ENSMFAG00000040931	STAU1	99	78.519	Macaca_fascicularis
ENSSDUG00000019439	stau1	93	67.706	ENSMMUG00000002302	STAU1	99	78.519	Macaca_mulatta
ENSSDUG00000019439	stau1	96	75.847	ENSMNEG00000033821	STAU1	99	75.847	Macaca_nemestrina
ENSSDUG00000019439	stau1	93	72.948	ENSMLEG00000031383	STAU1	95	72.948	Mandrillus_leucophaeus
ENSSDUG00000019439	stau1	100	96.527	ENSMAMG00000017586	stau1	100	96.833	Mastacembelus_armatus
ENSSDUG00000019439	stau1	100	94.092	ENSMZEG00005015605	stau1	100	94.092	Maylandia_zebra
ENSSDUG00000019439	stau1	99	71.409	ENSMGAG00000004719	STAU1	100	71.310	Meleagris_gallopavo
ENSSDUG00000019439	stau1	71	71.200	ENSMAUG00000013846	Stau1	99	71.200	Mesocricetus_auratus
ENSSDUG00000019439	stau1	93	71.033	ENSMICG00000001995	STAU1	95	71.033	Microcebus_murinus
ENSSDUG00000019439	stau1	71	71.600	ENSMOCG00000018743	Stau1	99	71.600	Microtus_ochrogaster
ENSSDUG00000019439	stau1	100	90.738	ENSMMOG00000015455	stau1	100	90.738	Mola_mola
ENSSDUG00000019439	stau1	96	73.887	ENSMODG00000016276	STAU1	99	73.887	Monodelphis_domestica
ENSSDUG00000019439	stau1	100	94.935	ENSMALG00000000045	stau1	100	94.935	Monopterus_albus
ENSSDUG00000019439	stau1	71	72.301	MGP_CAROLIEiJ_G0024699	Stau1	100	72.301	Mus_caroli
ENSSDUG00000019439	stau1	71	72.098	ENSMUSG00000039536	Stau1	100	72.098	Mus_musculus
ENSSDUG00000019439	stau1	71	71.660	MGP_PahariEiJ_G0026141	Stau1	99	71.660	Mus_pahari
ENSSDUG00000019439	stau1	71	71.894	MGP_SPRETEiJ_G0025619	Stau1	100	71.894	Mus_spretus
ENSSDUG00000019439	stau1	92	73.561	ENSMPUG00000017581	STAU1	95	73.561	Mustela_putorius_furo
ENSSDUG00000019439	stau1	93	71.828	ENSMLUG00000008407	STAU1	93	71.828	Myotis_lucifugus
ENSSDUG00000019439	stau1	71	72.600	ENSNGAG00000007108	Stau1	99	72.600	Nannospalax_galili
ENSSDUG00000019439	stau1	100	94.245	ENSNBRG00000017596	stau1	100	94.245	Neolamprologus_brichardi
ENSSDUG00000019439	stau1	96	72.761	ENSNLEG00000006955	STAU1	99	74.556	Nomascus_leucogenys
ENSSDUG00000019439	stau1	67	79.437	ENSMEUG00000003263	STAU1	80	79.437	Notamacropus_eugenii
ENSSDUG00000019439	stau1	77	71.375	ENSOPRG00000014569	STAU1	93	71.375	Ochotona_princeps
ENSSDUG00000019439	stau1	72	75.250	ENSODEG00000006523	STAU1	99	75.250	Octodon_degus
ENSSDUG00000019439	stau1	100	91.469	ENSONIG00000004152	stau1	99	91.469	Oreochromis_niloticus
ENSSDUG00000019439	stau1	96	73.746	ENSOANG00000006394	STAU1	96	73.638	Ornithorhynchus_anatinus
ENSSDUG00000019439	stau1	93	72.626	ENSOCUG00000006214	STAU1	95	72.626	Oryctolagus_cuniculus
ENSSDUG00000019439	stau1	99	89.275	ENSOMEG00000002388	stau1	99	89.275	Oryzias_melastigma
ENSSDUG00000019439	stau1	93	73.535	ENSOGAG00000002127	STAU1	93	73.535	Otolemur_garnettii
ENSSDUG00000019439	stau1	72	52.695	ENSOGAG00000028222	-	99	52.200	Otolemur_garnettii
ENSSDUG00000019439	stau1	93	72.798	ENSOARG00000012204	STAU1	96	72.798	Ovis_aries
ENSSDUG00000019439	stau1	93	67.706	ENSPPAG00000032023	STAU1	99	78.297	Pan_paniscus
ENSSDUG00000019439	stau1	96	73.507	ENSPPRG00000003436	STAU1	99	76.048	Panthera_pardus
ENSSDUG00000019439	stau1	96	73.507	ENSPTIG00000011768	STAU1	99	75.394	Panthera_tigris_altaica
ENSSDUG00000019439	stau1	93	67.706	ENSPTRG00000023130	STAU1	99	78.297	Pan_troglodytes
ENSSDUG00000019439	stau1	96	76.824	ENSPANG00000020560	STAU1	99	76.824	Papio_anubis
ENSSDUG00000019439	stau1	100	80.599	ENSPKIG00000024588	stau1	100	81.170	Paramormyrops_kingsleyae
ENSSDUG00000019439	stau1	99	74.249	ENSPSIG00000010731	STAU1	99	74.143	Pelodiscus_sinensis
ENSSDUG00000019439	stau1	99	86.925	ENSPMGG00000018553	stau1	100	86.801	Periophthalmus_magnuspinnatus
ENSSDUG00000019439	stau1	71	71.600	ENSPEMG00000022045	Stau1	99	71.600	Peromyscus_maniculatus_bairdii
ENSSDUG00000019439	stau1	99	71.693	ENSPCIG00000023269	STAU1	98	75.969	Phascolarctos_cinereus
ENSSDUG00000019439	stau1	100	89.368	ENSPFOG00000017253	stau1	99	89.496	Poecilia_formosa
ENSSDUG00000019439	stau1	57	87.032	ENSPLAG00000014829	stau1	97	83.805	Poecilia_latipinna
ENSSDUG00000019439	stau1	99	85.755	ENSPMEG00000007495	stau1	99	85.755	Poecilia_mexicana
ENSSDUG00000019439	stau1	100	89.799	ENSPREG00000003477	stau1	99	89.928	Poecilia_reticulata
ENSSDUG00000019439	stau1	93	72.812	ENSPPYG00000011111	STAU1	95	72.812	Pongo_abelii
ENSSDUG00000019439	stau1	73	66.270	ENSPCAG00000002459	STAU1	99	66.270	Procavia_capensis
ENSSDUG00000019439	stau1	93	72.201	ENSPCOG00000027746	STAU1	99	73.964	Propithecus_coquereli
ENSSDUG00000019439	stau1	66	79.139	ENSPVAG00000015019	STAU1	86	79.139	Pteropus_vampyrus
ENSSDUG00000019439	stau1	100	94.245	ENSPNYG00000014436	stau1	100	94.245	Pundamilia_nyererei
ENSSDUG00000019439	stau1	100	80.863	ENSPNAG00000011323	stau1	100	81.871	Pygocentrus_nattereri
ENSSDUG00000019439	stau1	71	71.200	ENSRNOG00000007781	Stau1	99	71.200	Rattus_norvegicus
ENSSDUG00000019439	stau1	72	75.100	ENSRBIG00000037345	STAU1	100	74.900	Rhinopithecus_bieti
ENSSDUG00000019439	stau1	96	75.847	ENSRROG00000039008	STAU1	99	75.847	Rhinopithecus_roxellana
ENSSDUG00000019439	stau1	93	71.956	ENSSBOG00000034448	STAU1	99	71.739	Saimiri_boliviensis_boliviensis
ENSSDUG00000019439	stau1	96	74.440	ENSSHAG00000009492	STAU1	99	73.778	Sarcophilus_harrisii
ENSSDUG00000019439	stau1	100	81.779	ENSSFOG00015021497	stau1	100	81.779	Scleropages_formosus
ENSSDUG00000019439	stau1	100	95.948	ENSSMAG00000017410	stau1	100	95.948	Scophthalmus_maximus
ENSSDUG00000019439	stau1	100	99.566	ENSSLDG00000025040	stau1	100	99.566	Seriola_lalandi_dorsalis
ENSSDUG00000019439	stau1	99	73.796	ENSSPUG00000017983	STAU1	99	74.336	Sphenodon_punctatus
ENSSDUG00000019439	stau1	100	98.553	ENSSPAG00000019275	stau1	100	98.553	Stegastes_partitus
ENSSDUG00000019439	stau1	96	72.761	ENSSSCG00000027444	STAU1	99	75.449	Sus_scrofa
ENSSDUG00000019439	stau1	100	70.759	ENSTGUG00000008784	STAU1	100	70.759	Taeniopygia_guttata
ENSSDUG00000019439	stau1	100	90.216	ENSTRUG00000005837	stau1	100	90.791	Takifugu_rubripes
ENSSDUG00000019439	stau1	97	88.148	ENSTNIG00000014732	stau1	99	88.148	Tetraodon_nigroviridis
ENSSDUG00000019439	stau1	96	62.197	ENSTBEG00000009404	STAU1	99	62.197	Tupaia_belangeri
ENSSDUG00000019439	stau1	67	74.675	ENSTTRG00000004285	STAU1	80	74.675	Tursiops_truncatus
ENSSDUG00000019439	stau1	72	74.016	ENSUAMG00000025449	STAU1	99	74.016	Ursus_americanus
ENSSDUG00000019439	stau1	55	71.354	ENSUMAG00000024475	STAU1	89	71.354	Ursus_maritimus
ENSSDUG00000019439	stau1	96	72.761	ENSVPAG00000001313	STAU1	99	72.761	Vicugna_pacos
ENSSDUG00000019439	stau1	93	72.451	ENSVVUG00000022325	STAU1	96	72.451	Vulpes_vulpes
ENSSDUG00000019439	stau1	96	71.958	ENSXETG00000001783	stau1	96	71.810	Xenopus_tropicalis
ENSSDUG00000019439	stau1	54	87.399	ENSXCOG00000008804	stau1	94	86.059	Xiphophorus_couchianus
ENSSDUG00000019439	stau1	99	90.346	ENSXMAG00000016175	stau1	99	90.346	Xiphophorus_maculatus