EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000019460 (Gene tree)
Gene ID: 111232970
Gene Symbol: esf1
Alias: fe06g12|im:7138472|wu:fe06g12|zgc:66241
Full Name: ESF1 nucleolar pre-rRNA processing protein homolog
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 10200 bases
Position: chrBDQW01000349.1:1232188-1242387
Accession: 111232970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000026891	NUC153	PF08159.12	3.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000027368	-	2118	XM_022760687	ENSSDUP00000026891	705 (aa)	XP_022616408	-

Gene Model

Click here to download ENSSDUG00000019460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000019460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000019460	esf1	93	67.059	ENSG00000089048	ESF1	76	71.622	Homo_sapiens
ENSSDUG00000019460	esf1	73	75.518	ENSAPOG00000003004	esf1	100	75.660	Acanthochromis_polyacanthus
ENSSDUG00000019460	esf1	99	73.611	ENSAMEG00000008830	ESF1	75	72.973	Ailuropoda_melanoleuca
ENSSDUG00000019460	esf1	100	79.150	ENSACIG00000018305	esf1	100	77.103	Amphilophus_citrinellus
ENSSDUG00000019460	esf1	100	72.605	ENSAOCG00000006033	esf1	100	78.835	Amphiprion_ocellaris
ENSSDUG00000019460	esf1	100	73.360	ENSAPEG00000022385	esf1	80	76.307	Amphiprion_percula
ENSSDUG00000019460	esf1	95	90.541	ENSATEG00000016321	esf1	86	90.541	Anabas_testudineus
ENSSDUG00000019460	esf1	94	68.966	ENSAPLG00000012113	ESF1	77	71.622	Anas_platyrhynchos
ENSSDUG00000019460	esf1	94	73.077	ENSACAG00000000963	ESF1	76	72.973	Anolis_carolinensis
ENSSDUG00000019460	esf1	93	73.077	ENSANAG00000036778	ESF1	75	72.973	Aotus_nancymaae
ENSSDUG00000019460	esf1	100	72.908	ENSACLG00000002972	esf1	79	78.078	Astatotilapia_calliptera
ENSSDUG00000019460	esf1	93	71.605	ENSAMXG00000001172	esf1	99	59.644	Astyanax_mexicanus
ENSSDUG00000019460	esf1	92	70.833	ENSBTAG00000007130	ESF1	75	70.270	Bos_taurus
ENSSDUG00000019460	esf1	97	73.077	ENSCJAG00000004640	ESF1	75	72.973	Callithrix_jacchus
ENSSDUG00000019460	esf1	91	72.222	ENSCAFG00000005587	ESF1	75	71.622	Canis_familiaris
ENSSDUG00000019460	esf1	91	72.222	ENSCAFG00020027530	ESF1	75	71.622	Canis_lupus_dingo
ENSSDUG00000019460	esf1	98	72.222	ENSCHIG00000021188	ESF1	78	71.622	Capra_hircus
ENSSDUG00000019460	esf1	97	73.611	ENSTSYG00000009956	ESF1	76	72.973	Carlito_syrichta
ENSSDUG00000019460	esf1	99	51.374	ENSCAPG00000010333	-	99	50.552	Cavia_aperea
ENSSDUG00000019460	esf1	99	72.222	ENSCAPG00000010466	-	53	71.622	Cavia_aperea
ENSSDUG00000019460	esf1	99	70.833	ENSCPOG00000014027	-	77	70.270	Cavia_porcellus
ENSSDUG00000019460	esf1	97	73.077	ENSCCAG00000024521	ESF1	75	72.973	Cebus_capucinus
ENSSDUG00000019460	esf1	91	72.222	ENSCATG00000042792	ESF1	76	71.622	Cercocebus_atys
ENSSDUG00000019460	esf1	91	73.611	ENSCLAG00000013266	-	77	72.973	Chinchilla_lanigera
ENSSDUG00000019460	esf1	91	72.222	ENSCSAG00000011777	ESF1	76	71.622	Chlorocebus_sabaeus
ENSSDUG00000019460	esf1	90	38.695	ENSCING00000020446	-	73	39.407	Ciona_intestinalis
ENSSDUG00000019460	esf1	89	41.703	ENSCSAVG00000009015	-	91	42.082	Ciona_savignyi
ENSSDUG00000019460	esf1	92	72.222	ENSCANG00000030674	ESF1	76	71.622	Colobus_angolensis_palliatus
ENSSDUG00000019460	esf1	92	69.444	ENSCGRG00001018257	Esf1	76	68.919	Cricetulus_griseus_chok1gshd
ENSSDUG00000019460	esf1	100	72.917	ENSCVAG00000007894	esf1	100	71.508	Cyprinodon_variegatus
ENSSDUG00000019460	esf1	81	65.128	ENSDARG00000008740	esf1	78	65.662	Danio_rerio
ENSSDUG00000019460	esf1	92	70.833	ENSDNOG00000019409	ESF1	75	70.270	Dasypus_novemcinctus
ENSSDUG00000019460	esf1	92	72.222	ENSDORG00000016313	Esf1	77	71.622	Dipodomys_ordii
ENSSDUG00000019460	esf1	90	41.463	FBgn0024364	CG11417	94	37.798	Drosophila_melanogaster
ENSSDUG00000019460	esf1	99	71.233	ENSEBUG00000015161	esf1	76	73.846	Eptatretus_burgeri
ENSSDUG00000019460	esf1	99	75.000	ENSEASG00005001777	ESF1	75	74.324	Equus_asinus_asinus
ENSSDUG00000019460	esf1	99	75.000	ENSECAG00000019188	ESF1	75	74.324	Equus_caballus
ENSSDUG00000019460	esf1	90	38.545	ENSEEUG00000015837	-	76	49.545	Erinaceus_europaeus
ENSSDUG00000019460	esf1	98	69.486	ENSELUG00000000408	esf1	84	77.027	Esox_lucius
ENSSDUG00000019460	esf1	91	73.239	ENSFCAG00000000919	ESF1	75	72.973	Felis_catus
ENSSDUG00000019460	esf1	97	61.698	ENSFALG00000010914	ESF1	76	68.919	Ficedula_albicollis
ENSSDUG00000019460	esf1	99	72.222	ENSFDAG00000014777	ESF1	77	71.622	Fukomys_damarensis
ENSSDUG00000019460	esf1	73	74.472	ENSFHEG00000014984	esf1	100	74.138	Fundulus_heteroclitus
ENSSDUG00000019460	esf1	93	66.250	ENSGALG00000034768	ESF1	75	67.568	Gallus_gallus
ENSSDUG00000019460	esf1	100	66.445	ENSGAFG00000000540	esf1	100	67.919	Gambusia_affinis
ENSSDUG00000019460	esf1	92	72.222	ENSGGOG00000006692	ESF1	76	71.622	Gorilla_gorilla
ENSSDUG00000019460	esf1	100	74.005	ENSHBUG00000001890	esf1	79	78.451	Haplochromis_burtoni
ENSSDUG00000019460	esf1	91	70.833	ENSHGLG00000011505	ESF1	78	70.270	Heterocephalus_glaber_female
ENSSDUG00000019460	esf1	91	70.833	ENSHGLG00100015045	ESF1	78	70.270	Heterocephalus_glaber_male
ENSSDUG00000019460	esf1	98	73.611	ENSSTOG00000009846	ESF1	76	72.973	Ictidomys_tridecemlineatus
ENSSDUG00000019460	esf1	96	73.611	ENSJJAG00000012570	Esf1	75	72.973	Jaculus_jaculus
ENSSDUG00000019460	esf1	93	75.000	ENSLACG00000016439	ESF1	76	79.167	Latimeria_chalumnae
ENSSDUG00000019460	esf1	93	77.778	ENSLOCG00000015979	esf1	84	78.378	Lepisosteus_oculatus
ENSSDUG00000019460	esf1	98	69.444	ENSLAFG00000005479	ESF1	80	68.919	Loxodonta_africana
ENSSDUG00000019460	esf1	91	72.222	ENSMFAG00000036841	ESF1	76	71.622	Macaca_fascicularis
ENSSDUG00000019460	esf1	91	72.222	ENSMNEG00000044042	ESF1	76	71.622	Macaca_nemestrina
ENSSDUG00000019460	esf1	91	70.833	ENSMLEG00000037121	ESF1	76	70.270	Mandrillus_leucophaeus
ENSSDUG00000019460	esf1	100	72.884	ENSMAMG00000018648	esf1	100	77.369	Mastacembelus_armatus
ENSSDUG00000019460	esf1	73	74.662	ENSMZEG00005013912	esf1	100	74.468	Maylandia_zebra
ENSSDUG00000019460	esf1	99	66.250	ENSMGAG00000004291	ESF1	76	67.568	Meleagris_gallopavo
ENSSDUG00000019460	esf1	92	72.222	ENSMAUG00000015975	Esf1	76	71.622	Mesocricetus_auratus
ENSSDUG00000019460	esf1	92	73.611	ENSMICG00000010711	ESF1	76	72.973	Microcebus_murinus
ENSSDUG00000019460	esf1	92	70.833	ENSMOCG00000005902	Esf1	76	70.270	Microtus_ochrogaster
ENSSDUG00000019460	esf1	73	78.352	ENSMMOG00000018693	esf1	100	80.651	Mola_mola
ENSSDUG00000019460	esf1	92	73.077	ENSMODG00000005066	ESF1	78	72.973	Monodelphis_domestica
ENSSDUG00000019460	esf1	94	68.785	ENSMALG00000007338	esf1	72	71.455	Monopterus_albus
ENSSDUG00000019460	esf1	92	70.833	MGP_CAROLIEiJ_G0024365	Esf1	77	70.270	Mus_caroli
ENSSDUG00000019460	esf1	81	61.246	ENSMUSG00000045624	Esf1	67	60.136	Mus_musculus
ENSSDUG00000019460	esf1	91	70.833	MGP_PahariEiJ_G0025810	Esf1	75	70.270	Mus_pahari
ENSSDUG00000019460	esf1	91	72.222	MGP_SPRETEiJ_G0025285	Esf1	68	71.622	Mus_spretus
ENSSDUG00000019460	esf1	92	73.611	ENSMPUG00000001450	ESF1	75	72.973	Mustela_putorius_furo
ENSSDUG00000019460	esf1	99	73.611	ENSMLUG00000013080	ESF1	75	72.973	Myotis_lucifugus
ENSSDUG00000019460	esf1	91	72.222	ENSNLEG00000014563	ESF1	75	71.622	Nomascus_leucogenys
ENSSDUG00000019460	esf1	74	55.703	ENSOPRG00000004862	ESF1	99	54.563	Ochotona_princeps
ENSSDUG00000019460	esf1	98	70.833	ENSODEG00000006824	ESF1	78	70.270	Octodon_degus
ENSSDUG00000019460	esf1	97	88.312	ENSONIG00000006804	esf1	83	87.838	Oreochromis_niloticus
ENSSDUG00000019460	esf1	92	75.641	ENSOANG00000008432	-	77	75.676	Ornithorhynchus_anatinus
ENSSDUG00000019460	esf1	99	73.611	ENSOCUG00000005414	ESF1	76	72.973	Oryctolagus_cuniculus
ENSSDUG00000019460	esf1	73	69.656	ENSORLG00000018625	esf1	99	70.420	Oryzias_latipes
ENSSDUG00000019460	esf1	99	69.061	ENSORLG00015022826	esf1	99	68.326	Oryzias_latipes_hsok
ENSSDUG00000019460	esf1	73	71.537	ENSOMEG00000009311	esf1	100	71.619	Oryzias_melastigma
ENSSDUG00000019460	esf1	92	70.833	ENSOGAG00000016912	ESF1	78	70.270	Otolemur_garnettii
ENSSDUG00000019460	esf1	92	72.222	ENSOARG00000011158	ESF1	73	71.622	Ovis_aries
ENSSDUG00000019460	esf1	92	72.222	ENSPPAG00000024379	ESF1	76	71.622	Pan_paniscus
ENSSDUG00000019460	esf1	91	73.239	ENSPPRG00000012007	ESF1	75	72.973	Panthera_pardus
ENSSDUG00000019460	esf1	91	73.239	ENSPTIG00000020063	ESF1	75	72.973	Panthera_tigris_altaica
ENSSDUG00000019460	esf1	91	72.222	ENSPTRG00000013258	ESF1	76	71.622	Pan_troglodytes
ENSSDUG00000019460	esf1	93	77.907	ENSPKIG00000024448	esf1	79	82.432	Paramormyrops_kingsleyae
ENSSDUG00000019460	esf1	99	67.532	ENSPMGG00000016911	esf1	83	67.568	Periophthalmus_magnuspinnatus
ENSSDUG00000019460	esf1	98	75.000	ENSPCIG00000019331	ESF1	76	77.612	Phascolarctos_cinereus
ENSSDUG00000019460	esf1	100	63.922	ENSPFOG00000010101	esf1	100	63.007	Poecilia_formosa
ENSSDUG00000019460	esf1	73	70.874	ENSPLAG00000006452	esf1	100	71.456	Poecilia_latipinna
ENSSDUG00000019460	esf1	100	66.008	ENSPMEG00000000713	esf1	81	72.623	Poecilia_mexicana
ENSSDUG00000019460	esf1	100	64.529	ENSPREG00000004431	esf1	79	71.875	Poecilia_reticulata
ENSSDUG00000019460	esf1	91	72.222	ENSPPYG00000010715	ESF1	76	71.622	Pongo_abelii
ENSSDUG00000019460	esf1	64	68.056	ENSPCAG00000006881	ESF1	50	67.568	Procavia_capensis
ENSSDUG00000019460	esf1	92	69.444	ENSPVAG00000001295	ESF1	67	68.919	Pteropus_vampyrus
ENSSDUG00000019460	esf1	100	74.267	ENSPNYG00000015735	esf1	80	78.451	Pundamilia_nyererei
ENSSDUG00000019460	esf1	81	66.497	ENSPNAG00000014721	esf1	85	71.622	Pygocentrus_nattereri
ENSSDUG00000019460	esf1	92	70.833	ENSRNOG00000004777	Esf1	75	70.270	Rattus_norvegicus
ENSSDUG00000019460	esf1	91	72.222	ENSRBIG00000035763	ESF1	75	71.622	Rhinopithecus_bieti
ENSSDUG00000019460	esf1	91	72.222	ENSRROG00000032022	ESF1	75	71.622	Rhinopithecus_roxellana
ENSSDUG00000019460	esf1	67	32.480	YDR365C	-	57	30.637	Saccharomyces_cerevisiae
ENSSDUG00000019460	esf1	92	73.611	ENSSBOG00000030387	ESF1	75	72.973	Saimiri_boliviensis_boliviensis
ENSSDUG00000019460	esf1	92	75.000	ENSSHAG00000000449	ESF1	80	74.324	Sarcophilus_harrisii
ENSSDUG00000019460	esf1	99	74.026	ENSSPUG00000012635	ESF1	80	72.973	Sphenodon_punctatus
ENSSDUG00000019460	esf1	100	72.423	ENSSPAG00000019077	esf1	80	78.135	Stegastes_partitus
ENSSDUG00000019460	esf1	91	72.222	ENSSSCG00000007077	ESF1	74	71.622	Sus_scrofa
ENSSDUG00000019460	esf1	92	66.667	ENSTGUG00000002450	ESF1	74	66.216	Taeniopygia_guttata
ENSSDUG00000019460	esf1	67	73.333	ENSTBEG00000008552	ESF1	56	71.875	Tupaia_belangeri
ENSSDUG00000019460	esf1	92	73.611	ENSTTRG00000005335	ESF1	75	72.973	Tursiops_truncatus
ENSSDUG00000019460	esf1	92	72.222	ENSUMAG00000008579	ESF1	75	71.622	Ursus_maritimus
ENSSDUG00000019460	esf1	82	70.833	ENSVPAG00000005291	ESF1	68	70.270	Vicugna_pacos
ENSSDUG00000019460	esf1	91	72.222	ENSVVUG00000014318	ESF1	70	71.622	Vulpes_vulpes
ENSSDUG00000019460	esf1	92	72.973	ENSXETG00000008079	esf1	80	72.973	Xenopus_tropicalis
ENSSDUG00000019460	esf1	100	62.432	ENSXMAG00000017651	esf1	90	72.973	Xiphophorus_maculatus