EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000019541 (Gene tree)
Gene ID: 111226199
Gene Symbol: trmt5
Alias: wu:fi28b08
Full Name: tRNA methyltransferase 5
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4118 bases
Position: chrBDQW01000149.1:11702824-11706941
Accession: 111226199
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000026958	Methyltransf_15	PF09445.10	9.1e-05	1	1
ENSSDUP00000026958	Met_10	PF02475.16	8.8e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000027435	-	2399	XM_022751310	ENSSDUP00000026958	488 (aa)	XP_022607031	-

Gene Model

Click here to download ENSSDUG00000019541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000019541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000019541	trmt5	81	43.000	ENSSDUG00000019588	-	93	45.932

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000019541	trmt5	86	57.512	ENSG00000126814	TRMT5	84	57.343	Homo_sapiens
ENSSDUG00000019541	trmt5	88	89.559	ENSAPOG00000015490	trmt5	100	89.559	Acanthochromis_polyacanthus
ENSSDUG00000019541	trmt5	96	53.484	ENSAMEG00000002979	TRMT5	95	53.484	Ailuropoda_melanoleuca
ENSSDUG00000019541	trmt5	88	86.079	ENSACIG00000024216	trmt5	100	86.079	Amphilophus_citrinellus
ENSSDUG00000019541	trmt5	94	85.466	ENSAOCG00000007757	trmt5	99	89.095	Amphiprion_ocellaris
ENSSDUG00000019541	trmt5	94	85.000	ENSAPEG00000022718	trmt5	99	89.095	Amphiprion_percula
ENSSDUG00000019541	trmt5	100	84.631	ENSATEG00000015576	trmt5	99	84.631	Anabas_testudineus
ENSSDUG00000019541	trmt5	86	60.706	ENSAPLG00000008002	TRMT5	85	60.706	Anas_platyrhynchos
ENSSDUG00000019541	trmt5	86	57.412	ENSACAG00000006533	TRMT5	83	57.412	Anolis_carolinensis
ENSSDUG00000019541	trmt5	87	57.809	ENSANAG00000024875	TRMT5	78	57.809	Aotus_nancymaae
ENSSDUG00000019541	trmt5	94	82.096	ENSACLG00000020216	trmt5	100	76.969	Astatotilapia_calliptera
ENSSDUG00000019541	trmt5	97	64.372	ENSAMXG00000021299	trmt5	98	64.372	Astyanax_mexicanus
ENSSDUG00000019541	trmt5	87	58.140	ENSBTAG00000011796	TRMT5	86	58.140	Bos_taurus
ENSSDUG00000019541	trmt5	82	35.011	WBGene00194707	C53A5.17	97	34.914	Caenorhabditis_elegans
ENSSDUG00000019541	trmt5	87	57.809	ENSCJAG00000019157	TRMT5	84	57.809	Callithrix_jacchus
ENSSDUG00000019541	trmt5	87	58.140	ENSCAFG00000015647	TRMT5	86	57.809	Canis_familiaris
ENSSDUG00000019541	trmt5	86	57.710	ENSCAFG00020008016	TRMT5	86	57.710	Canis_lupus_dingo
ENSSDUG00000019541	trmt5	87	56.977	ENSCHIG00000018801	TRMT5	86	56.977	Capra_hircus
ENSSDUG00000019541	trmt5	87	57.343	ENSTSYG00000001043	TRMT5	84	57.343	Carlito_syrichta
ENSSDUG00000019541	trmt5	86	42.791	ENSCAPG00000014642	TRMT5	82	46.744	Cavia_aperea
ENSSDUG00000019541	trmt5	86	56.604	ENSCPOG00000014396	TRMT5	84	56.604	Cavia_porcellus
ENSSDUG00000019541	trmt5	87	57.845	ENSCCAG00000037835	TRMT5	84	57.845	Cebus_capucinus
ENSSDUG00000019541	trmt5	87	57.611	ENSCATG00000045352	TRMT5	84	57.611	Cercocebus_atys
ENSSDUG00000019541	trmt5	86	57.277	ENSCLAG00000013155	TRMT5	88	57.277	Chinchilla_lanigera
ENSSDUG00000019541	trmt5	87	57.343	ENSCSAG00000014159	TRMT5	77	57.343	Chlorocebus_sabaeus
ENSSDUG00000019541	trmt5	78	58.442	ENSCHOG00000008128	-	97	58.442	Choloepus_hoffmanni
ENSSDUG00000019541	trmt5	87	60.000	ENSCPBG00000022359	TRMT5	85	60.000	Chrysemys_picta_bellii
ENSSDUG00000019541	trmt5	86	45.139	ENSCING00000018970	-	94	46.098	Ciona_intestinalis
ENSSDUG00000019541	trmt5	85	46.101	ENSCSAVG00000000418	-	94	46.101	Ciona_savignyi
ENSSDUG00000019541	trmt5	87	57.343	ENSCANG00000032648	TRMT5	84	57.343	Colobus_angolensis_palliatus
ENSSDUG00000019541	trmt5	87	57.243	ENSCGRG00001018337	TRMT5	95	57.243	Cricetulus_griseus_chok1gshd
ENSSDUG00000019541	trmt5	87	57.243	ENSCGRG00000010454	Trmt5	85	57.243	Cricetulus_griseus_crigri
ENSSDUG00000019541	trmt5	98	77.662	ENSCSEG00000001533	trmt5	100	77.662	Cynoglossus_semilaevis
ENSSDUG00000019541	trmt5	88	83.295	ENSCVAG00000007630	trmt5	99	83.295	Cyprinodon_variegatus
ENSSDUG00000019541	trmt5	87	67.206	ENSDARG00000069278	trmt5	90	67.206	Danio_rerio
ENSSDUG00000019541	trmt5	87	56.279	ENSDNOG00000019211	TRMT5	83	56.279	Dasypus_novemcinctus
ENSSDUG00000019541	trmt5	87	57.710	ENSDORG00000015555	Trmt5	86	57.710	Dipodomys_ordii
ENSSDUG00000019541	trmt5	83	45.278	FBgn0052281	CG32281	89	45.278	Drosophila_melanogaster
ENSSDUG00000019541	trmt5	67	60.606	ENSETEG00000017163	TRMT5	65	60.606	Echinops_telfairi
ENSSDUG00000019541	trmt5	67	46.686	ENSEBUG00000002145	trmt5	64	44.670	Eptatretus_burgeri
ENSSDUG00000019541	trmt5	87	57.442	ENSEASG00005016123	TRMT5	85	57.442	Equus_asinus_asinus
ENSSDUG00000019541	trmt5	87	57.442	ENSECAG00000000057	TRMT5	85	57.442	Equus_caballus
ENSSDUG00000019541	trmt5	97	71.134	ENSELUG00000011314	trmt5	99	71.134	Esox_lucius
ENSSDUG00000019541	trmt5	87	58.102	ENSFCAG00000006820	TRMT5	83	58.102	Felis_catus
ENSSDUG00000019541	trmt5	86	62.207	ENSFALG00000003430	TRMT5	82	62.676	Ficedula_albicollis
ENSSDUG00000019541	trmt5	87	56.643	ENSFDAG00000018556	TRMT5	85	56.643	Fukomys_damarensis
ENSSDUG00000019541	trmt5	98	79.874	ENSFHEG00000008062	trmt5	100	79.874	Fundulus_heteroclitus
ENSSDUG00000019541	trmt5	87	75.935	ENSGMOG00000010858	trmt5	99	75.935	Gadus_morhua
ENSSDUG00000019541	trmt5	88	60.417	ENSGALG00000011904	TRMT5	86	60.417	Gallus_gallus
ENSSDUG00000019541	trmt5	98	74.004	ENSGAFG00000004103	trmt5	100	74.004	Gambusia_affinis
ENSSDUG00000019541	trmt5	88	87.413	ENSGACG00000008470	trmt5	99	87.413	Gasterosteus_aculeatus
ENSSDUG00000019541	trmt5	87	61.395	ENSGAGG00000023507	TRMT5	86	61.395	Gopherus_agassizii
ENSSDUG00000019541	trmt5	87	57.576	ENSGGOG00000006831	TRMT5	85	57.576	Gorilla_gorilla
ENSSDUG00000019541	trmt5	98	82.427	ENSHBUG00000023000	trmt5	100	82.427	Haplochromis_burtoni
ENSSDUG00000019541	trmt5	87	57.143	ENSHGLG00000013713	TRMT5	95	57.143	Heterocephalus_glaber_female
ENSSDUG00000019541	trmt5	87	55.504	ENSHGLG00100002392	TRMT5	83	55.504	Heterocephalus_glaber_male
ENSSDUG00000019541	trmt5	92	78.714	ENSHCOG00000012203	trmt5	98	84.198	Hippocampus_comes
ENSSDUG00000019541	trmt5	87	64.640	ENSIPUG00000002612	trmt5	90	64.640	Ictalurus_punctatus
ENSSDUG00000019541	trmt5	87	56.308	ENSSTOG00000011865	TRMT5	86	55.841	Ictidomys_tridecemlineatus
ENSSDUG00000019541	trmt5	86	57.683	ENSJJAG00000009935	Trmt5	97	57.683	Jaculus_jaculus
ENSSDUG00000019541	trmt5	88	84.579	ENSKMAG00000005992	trmt5	100	84.579	Kryptolebias_marmoratus
ENSSDUG00000019541	trmt5	91	82.960	ENSLBEG00000023240	trmt5	100	85.151	Labrus_bergylta
ENSSDUG00000019541	trmt5	87	62.093	ENSLACG00000018464	TRMT5	96	62.093	Latimeria_chalumnae
ENSSDUG00000019541	trmt5	88	65.814	ENSLOCG00000010120	trmt5	97	65.814	Lepisosteus_oculatus
ENSSDUG00000019541	trmt5	87	58.275	ENSLAFG00000003616	TRMT5	84	58.275	Loxodonta_africana
ENSSDUG00000019541	trmt5	87	57.343	ENSMFAG00000002940	TRMT5	84	57.343	Macaca_fascicularis
ENSSDUG00000019541	trmt5	87	52.214	ENSMMUG00000013611	TRMT5	84	52.214	Macaca_mulatta
ENSSDUG00000019541	trmt5	87	57.343	ENSMNEG00000000131	TRMT5	84	57.343	Macaca_nemestrina
ENSSDUG00000019541	trmt5	87	57.343	ENSMLEG00000043649	TRMT5	84	57.343	Mandrillus_leucophaeus
ENSSDUG00000019541	trmt5	99	84.394	ENSMAMG00000001758	trmt5	99	84.394	Mastacembelus_armatus
ENSSDUG00000019541	trmt5	98	81.590	ENSMZEG00005007457	trmt5	100	81.590	Maylandia_zebra
ENSSDUG00000019541	trmt5	88	60.138	ENSMGAG00000013565	TRMT5	86	60.138	Meleagris_gallopavo
ENSSDUG00000019541	trmt5	87	57.576	ENSMAUG00000016091	Trmt5	86	57.576	Mesocricetus_auratus
ENSSDUG00000019541	trmt5	97	53.388	ENSMICG00000044351	TRMT5	95	53.388	Microcebus_murinus
ENSSDUG00000019541	trmt5	87	57.009	ENSMOCG00000020904	Trmt5	85	57.009	Microtus_ochrogaster
ENSSDUG00000019541	trmt5	98	82.008	ENSMMOG00000012159	trmt5	98	82.008	Mola_mola
ENSSDUG00000019541	trmt5	87	55.606	ENSMODG00000008664	TRMT5	86	55.606	Monodelphis_domestica
ENSSDUG00000019541	trmt5	99	82.957	ENSMALG00000009533	trmt5	100	82.957	Monopterus_albus
ENSSDUG00000019541	trmt5	86	58.156	MGP_CAROLIEiJ_G0017843	Trmt5	84	58.156	Mus_caroli
ENSSDUG00000019541	trmt5	86	57.042	ENSMUSG00000034442	Trmt5	85	57.042	Mus_musculus
ENSSDUG00000019541	trmt5	87	56.643	MGP_PahariEiJ_G0029601	Trmt5	85	56.643	Mus_pahari
ENSSDUG00000019541	trmt5	86	56.808	MGP_SPRETEiJ_G0018690	Trmt5	85	56.808	Mus_spretus
ENSSDUG00000019541	trmt5	87	57.009	ENSMPUG00000006435	TRMT5	72	57.009	Mustela_putorius_furo
ENSSDUG00000019541	trmt5	87	57.809	ENSMLUG00000002357	TRMT5	84	57.809	Myotis_lucifugus
ENSSDUG00000019541	trmt5	87	56.643	ENSNGAG00000012691	Trmt5	86	56.643	Nannospalax_galili
ENSSDUG00000019541	trmt5	88	85.648	ENSNBRG00000009536	trmt5	100	85.648	Neolamprologus_brichardi
ENSSDUG00000019541	trmt5	97	53.623	ENSNLEG00000013805	TRMT5	95	53.623	Nomascus_leucogenys
ENSSDUG00000019541	trmt5	60	49.329	ENSMEUG00000004767	-	95	49.329	Notamacropus_eugenii
ENSSDUG00000019541	trmt5	74	59.409	ENSOPRG00000011719	TRMT5	73	59.409	Ochotona_princeps
ENSSDUG00000019541	trmt5	85	57.554	ENSODEG00000013922	TRMT5	87	57.554	Octodon_degus
ENSSDUG00000019541	trmt5	100	82.413	ENSONIG00000020115	trmt5	92	82.413	Oreochromis_niloticus
ENSSDUG00000019541	trmt5	97	53.814	ENSOCUG00000014281	TRMT5	96	53.814	Oryctolagus_cuniculus
ENSSDUG00000019541	trmt5	97	78.270	ENSORLG00000015734	trmt5	99	78.270	Oryzias_latipes
ENSSDUG00000019541	trmt5	97	77.848	ENSORLG00020009860	trmt5	99	77.848	Oryzias_latipes_hni
ENSSDUG00000019541	trmt5	88	82.093	ENSORLG00015008653	trmt5	99	82.885	Oryzias_latipes_hsok
ENSSDUG00000019541	trmt5	97	79.070	ENSOMEG00000006629	trmt5	99	79.070	Oryzias_melastigma
ENSSDUG00000019541	trmt5	87	57.845	ENSOGAG00000016088	TRMT5	84	57.845	Otolemur_garnettii
ENSSDUG00000019541	trmt5	88	58.102	ENSOARG00000021132	TRMT5	86	58.102	Ovis_aries
ENSSDUG00000019541	trmt5	87	57.576	ENSPPAG00000035176	TRMT5	85	57.576	Pan_paniscus
ENSSDUG00000019541	trmt5	87	58.102	ENSPPRG00000013336	TRMT5	84	58.102	Panthera_pardus
ENSSDUG00000019541	trmt5	80	59.747	ENSPTIG00000006744	TRMT5	83	59.747	Panthera_tigris_altaica
ENSSDUG00000019541	trmt5	87	57.576	ENSPTRG00000006415	TRMT5	85	57.576	Pan_troglodytes
ENSSDUG00000019541	trmt5	87	57.110	ENSPANG00000016605	TRMT5	84	57.110	Papio_anubis
ENSSDUG00000019541	trmt5	87	65.654	ENSPKIG00000018196	trmt5	99	63.087	Paramormyrops_kingsleyae
ENSSDUG00000019541	trmt5	88	60.648	ENSPSIG00000014128	TRMT5	85	60.648	Pelodiscus_sinensis
ENSSDUG00000019541	trmt5	93	75.000	ENSPMGG00000003882	trmt5	88	75.000	Periophthalmus_magnuspinnatus
ENSSDUG00000019541	trmt5	88	58.565	ENSPEMG00000022664	Trmt5	87	58.565	Peromyscus_maniculatus_bairdii
ENSSDUG00000019541	trmt5	85	56.190	ENSPCIG00000020458	TRMT5	81	56.190	Phascolarctos_cinereus
ENSSDUG00000019541	trmt5	88	82.135	ENSPFOG00000008680	trmt5	100	82.135	Poecilia_formosa
ENSSDUG00000019541	trmt5	94	77.681	ENSPLAG00000014197	trmt5	99	77.681	Poecilia_latipinna
ENSSDUG00000019541	trmt5	98	77.149	ENSPMEG00000014848	trmt5	100	77.149	Poecilia_mexicana
ENSSDUG00000019541	trmt5	87	81.560	ENSPREG00000015503	trmt5	100	81.560	Poecilia_reticulata
ENSSDUG00000019541	trmt5	87	57.576	ENSPPYG00000005877	TRMT5	84	57.576	Pongo_abelii
ENSSDUG00000019541	trmt5	51	61.905	ENSPCAG00000006616	-	52	61.905	Procavia_capensis
ENSSDUG00000019541	trmt5	97	52.977	ENSPCOG00000017447	TRMT5	95	52.977	Propithecus_coquereli
ENSSDUG00000019541	trmt5	55	59.854	ENSPVAG00000015311	TRMT5	54	59.854	Pteropus_vampyrus
ENSSDUG00000019541	trmt5	88	86.111	ENSPNYG00000022005	trmt5	100	86.111	Pundamilia_nyererei
ENSSDUG00000019541	trmt5	97	65.289	ENSPNAG00000022427	trmt5	99	65.289	Pygocentrus_nattereri
ENSSDUG00000019541	trmt5	87	56.909	ENSRNOG00000007785	Trmt5	95	56.909	Rattus_norvegicus
ENSSDUG00000019541	trmt5	87	57.110	ENSRBIG00000033903	TRMT5	84	57.110	Rhinopithecus_bieti
ENSSDUG00000019541	trmt5	87	57.110	ENSRROG00000035334	TRMT5	84	57.110	Rhinopithecus_roxellana
ENSSDUG00000019541	trmt5	85	35.497	YHR070W	-	97	35.497	Saccharomyces_cerevisiae
ENSSDUG00000019541	trmt5	87	57.845	ENSSBOG00000027786	TRMT5	84	58.968	Saimiri_boliviensis_boliviensis
ENSSDUG00000019541	trmt5	88	56.250	ENSSHAG00000003232	TRMT5	86	56.250	Sarcophilus_harrisii
ENSSDUG00000019541	trmt5	87	67.907	ENSSFOG00015013093	trmt5	98	67.907	Scleropages_formosus
ENSSDUG00000019541	trmt5	98	86.134	ENSSMAG00000001616	trmt5	99	86.134	Scophthalmus_maximus
ENSSDUG00000019541	trmt5	92	96.896	ENSSLDG00000001680	trmt5	100	98.840	Seriola_lalandi_dorsalis
ENSSDUG00000019541	trmt5	87	57.809	ENSSARG00000012431	TRMT5	84	57.809	Sorex_araneus
ENSSDUG00000019541	trmt5	87	59.016	ENSSPUG00000010098	TRMT5	86	59.016	Sphenodon_punctatus
ENSSDUG00000019541	trmt5	97	85.654	ENSSPAG00000012940	trmt5	99	85.654	Stegastes_partitus
ENSSDUG00000019541	trmt5	87	57.809	ENSSSCG00000024529	TRMT5	86	57.809	Sus_scrofa
ENSSDUG00000019541	trmt5	82	61.576	ENSTGUG00000012988	TRMT5	85	61.576	Taeniopygia_guttata
ENSSDUG00000019541	trmt5	94	77.657	ENSTRUG00000010888	trmt5	97	77.657	Takifugu_rubripes
ENSSDUG00000019541	trmt5	87	79.812	ENSTNIG00000017342	trmt5	98	79.812	Tetraodon_nigroviridis
ENSSDUG00000019541	trmt5	86	57.311	ENSTBEG00000005659	TRMT5	84	57.311	Tupaia_belangeri
ENSSDUG00000019541	trmt5	87	57.442	ENSTTRG00000013839	TRMT5	85	57.442	Tursiops_truncatus
ENSSDUG00000019541	trmt5	87	57.477	ENSUAMG00000023288	TRMT5	86	57.477	Ursus_americanus
ENSSDUG00000019541	trmt5	87	56.776	ENSUMAG00000013736	TRMT5	97	56.776	Ursus_maritimus
ENSSDUG00000019541	trmt5	87	56.977	ENSVPAG00000002392	TRMT5	84	56.977	Vicugna_pacos
ENSSDUG00000019541	trmt5	86	57.944	ENSVVUG00000029464	TRMT5	86	57.944	Vulpes_vulpes
ENSSDUG00000019541	trmt5	87	59.535	ENSXETG00000014455	trmt5	86	59.535	Xenopus_tropicalis
ENSSDUG00000019541	trmt5	95	78.112	ENSXCOG00000008547	trmt5	100	78.112	Xiphophorus_couchianus
ENSSDUG00000019541	trmt5	94	78.603	ENSXMAG00000013474	trmt5	99	78.603	Xiphophorus_maculatus