EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000019756 (Gene tree)
Gene ID: 111227186
Gene Symbol: si:dkey-32e23.4
Alias: -
Full Name: dynamin-1-like protein
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 6177 bases
Position: chrBDQW01000017.1:4447598-4453774
Accession: 111227186
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000027398	MMR_HSR1	PF01926.23	4.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000027864	-	2366	XM_022752623	ENSSDUP00000027380	660 (aa)	XP_022608344	UPI000BBE3F1E
ENSSDUT00000027830	-	2405	XM_022752616	ENSSDUP00000027346	673 (aa)	XP_022608337	UPI000BBE2B4D
ENSSDUT00000027882	-	1959	-	ENSSDUP00000027398	652 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000019756's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu04217	Necroptosis	KEGG
sdu04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000019756's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000019756	si:dkey-32e23.4	100	70.425	ENSSDUG00000008937	-	100	70.425
ENSSDUG00000019756	si:dkey-32e23.4	100	69.971	ENSSDUG00000022859	dnm1l	100	69.971

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000019756	si:dkey-32e23.4	100	91.970	ENSCVAG00000010346	si:dkey-32e23.4	100	91.970	Cyprinodon_variegatus
ENSSDUG00000019756	si:dkey-32e23.4	100	88.226	ENSELUG00000017713	si:dkey-32e23.4	100	88.226	Esox_lucius
ENSSDUG00000019756	si:dkey-32e23.4	100	91.818	ENSFHEG00000019298	si:dkey-32e23.4	100	91.818	Fundulus_heteroclitus
ENSSDUG00000019756	si:dkey-32e23.4	100	78.144	ENSGMOG00000005670	si:dkey-32e23.4	100	78.144	Gadus_morhua
ENSSDUG00000019756	si:dkey-32e23.4	100	91.970	ENSHCOG00000018024	si:dkey-32e23.4	100	91.970	Hippocampus_comes
ENSSDUG00000019756	si:dkey-32e23.4	100	86.989	ENSIPUG00000007113	si:dkey-32e23.4	100	86.989	Ictalurus_punctatus
ENSSDUG00000019756	si:dkey-32e23.4	100	93.485	ENSLBEG00000004848	si:dkey-32e23.4	100	93.485	Labrus_bergylta
ENSSDUG00000019756	si:dkey-32e23.4	100	94.091	ENSMALG00000006625	si:dkey-32e23.4	100	94.091	Monopterus_albus
ENSSDUG00000019756	si:dkey-32e23.4	100	90.152	ENSORLG00000011119	si:dkey-32e23.4	97	90.152	Oryzias_latipes
ENSSDUG00000019756	si:dkey-32e23.4	100	88.956	ENSORLG00020006829	si:dkey-32e23.4	100	88.956	Oryzias_latipes_hni
ENSSDUG00000019756	si:dkey-32e23.4	100	90.000	ENSORLG00015021365	si:dkey-32e23.4	100	90.000	Oryzias_latipes_hsok
ENSSDUG00000019756	si:dkey-32e23.4	100	89.599	ENSOMEG00000009143	si:dkey-32e23.4	100	89.599	Oryzias_melastigma
ENSSDUG00000019756	si:dkey-32e23.4	100	91.364	ENSPLAG00000023009	si:dkey-32e23.4	100	91.364	Poecilia_latipinna
ENSSDUG00000019756	si:dkey-32e23.4	100	91.364	ENSPMEG00000009231	si:dkey-32e23.4	100	91.364	Poecilia_mexicana
ENSSDUG00000019756	si:dkey-32e23.4	100	86.677	ENSPNAG00000020681	si:dkey-32e23.4	100	86.677	Pygocentrus_nattereri
ENSSDUG00000019756	si:dkey-32e23.4	100	93.636	ENSSMAG00000007121	si:dkey-32e23.4	96	93.636	Scophthalmus_maximus
ENSSDUG00000019756	si:dkey-32e23.4	100	95.092	ENSSPAG00000011027	si:dkey-32e23.4	100	95.092	Stegastes_partitus