EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000019766 (Gene tree)
Gene ID: 111220632
Gene Symbol: cpeb3
Alias: si:ch211-129m12.2
Full Name: cytoplasmic polyadenylation element binding protein 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 41909 bases
Position: chrBDQW01000073.1:2704521-2746429
Accession: 111220632
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000027333	RRM_1	PF00076.22	1.7e-10	1	1
ENSSDUP00000027322	RRM_1	PF00076.22	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000027859	-	2025	-	ENSSDUP00000027375	674 (aa)	-	-
ENSSDUT00000027817	-	2146	XM_022743779	ENSSDUP00000027333	659 (aa)	XP_022599500	-
ENSSDUT00000027805	-	2857	-	ENSSDUP00000027322	676 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000019766's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu04114	Oocyte meiosis	KEGG
sdu04914	Progesterone-mediated oocyte maturation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000019766's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000019766	cpeb3	100	56.436	ENSSDUG00000009599	cpeb4a	84	59.225
ENSSDUG00000019766	cpeb3	64	76.168	ENSSDUG00000020954	CPEB4	91	57.022

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000019766	cpeb3	100	74.928	ENSG00000107864	CPEB3	100	74.711	Homo_sapiens
ENSSDUG00000019766	cpeb3	100	92.836	ENSAPOG00000003625	cpeb3	100	92.836	Acanthochromis_polyacanthus
ENSSDUG00000019766	cpeb3	100	68.961	ENSAMEG00000014204	CPEB3	100	68.503	Ailuropoda_melanoleuca
ENSSDUG00000019766	cpeb3	100	90.173	ENSACIG00000001933	cpeb3	100	90.029	Amphilophus_citrinellus
ENSSDUG00000019766	cpeb3	100	95.915	ENSAOCG00000015423	cpeb3	100	95.915	Amphiprion_ocellaris
ENSSDUG00000019766	cpeb3	100	95.915	ENSATEG00000010649	cpeb3	100	95.915	Anabas_testudineus
ENSSDUG00000019766	cpeb3	100	76.143	ENSACAG00000006335	CPEB3	100	75.429	Anolis_carolinensis
ENSSDUG00000019766	cpeb3	100	72.524	ENSANAG00000037406	CPEB3	100	70.668	Aotus_nancymaae
ENSSDUG00000019766	cpeb3	100	93.192	ENSACLG00000018590	cpeb3	91	91.471	Astatotilapia_calliptera
ENSSDUG00000019766	cpeb3	100	73.714	ENSBTAG00000015450	CPEB3	94	94.040	Bos_taurus
ENSSDUG00000019766	cpeb3	100	72.486	ENSCJAG00000008495	CPEB3	100	72.207	Callithrix_jacchus
ENSSDUG00000019766	cpeb3	100	74.462	ENSCAFG00000007423	CPEB3	100	73.882	Canis_familiaris
ENSSDUG00000019766	cpeb3	100	71.114	ENSCAFG00020001981	CPEB3	92	93.791	Canis_lupus_dingo
ENSSDUG00000019766	cpeb3	100	70.994	ENSCHIG00000017337	CPEB3	100	70.994	Capra_hircus
ENSSDUG00000019766	cpeb3	83	83.529	ENSTSYG00000003928	CPEB3	82	83.607	Carlito_syrichta
ENSSDUG00000019766	cpeb3	100	72.346	ENSCCAG00000033267	CPEB3	100	70.977	Cebus_capucinus
ENSSDUG00000019766	cpeb3	100	74.713	ENSCATG00000038447	CPEB3	100	73.563	Cercocebus_atys
ENSSDUG00000019766	cpeb3	67	84.255	ENSCLAG00000011817	CPEB3	95	84.255	Chinchilla_lanigera
ENSSDUG00000019766	cpeb3	100	74.964	ENSCSAG00000006579	CPEB3	100	74.245	Chlorocebus_sabaeus
ENSSDUG00000019766	cpeb3	53	74.731	ENSCHOG00000000272	-	100	74.731	Choloepus_hoffmanni
ENSSDUG00000019766	cpeb3	100	78.909	ENSCPBG00000023779	CPEB3	100	77.893	Chrysemys_picta_bellii
ENSSDUG00000019766	cpeb3	100	74.605	ENSCANG00000040306	CPEB3	100	74.496	Colobus_angolensis_palliatus
ENSSDUG00000019766	cpeb3	100	71.271	ENSCGRG00001003846	Cpeb3	100	70.856	Cricetulus_griseus_chok1gshd
ENSSDUG00000019766	cpeb3	59	85.301	ENSCGRG00000002839	Cpeb3	100	85.301	Cricetulus_griseus_crigri
ENSSDUG00000019766	cpeb3	90	85.646	ENSCSEG00000008423	cpeb3	100	84.370	Cynoglossus_semilaevis
ENSSDUG00000019766	cpeb3	100	84.441	ENSCVAG00000005998	cpeb3	100	83.988	Cyprinodon_variegatus
ENSSDUG00000019766	cpeb3	100	71.726	ENSDARG00000060103	cpeb3	100	70.982	Danio_rerio
ENSSDUG00000019766	cpeb3	100	67.594	ENSDNOG00000048639	CPEB3	100	66.993	Dasypus_novemcinctus
ENSSDUG00000019766	cpeb3	89	89.038	ENSDORG00000028940	Cpeb3	87	89.038	Dipodomys_ordii
ENSSDUG00000019766	cpeb3	100	68.697	ENSETEG00000000111	CPEB3	100	67.664	Echinops_telfairi
ENSSDUG00000019766	cpeb3	90	63.339	ENSEBUG00000010745	cpeb3	91	58.333	Eptatretus_burgeri
ENSSDUG00000019766	cpeb3	100	71.983	ENSEASG00005011095	CPEB3	100	71.409	Equus_asinus_asinus
ENSSDUG00000019766	cpeb3	100	72.083	ENSECAG00000000077	CPEB3	100	71.508	Equus_caballus
ENSSDUG00000019766	cpeb3	100	85.052	ENSELUG00000019251	cpeb3	100	83.857	Esox_lucius
ENSSDUG00000019766	cpeb3	100	74.569	ENSFCAG00000032380	CPEB3	100	74.566	Felis_catus
ENSSDUG00000019766	cpeb3	100	78.932	ENSFALG00000007952	CPEB3	87	78.254	Ficedula_albicollis
ENSSDUG00000019766	cpeb3	83	83.834	ENSFDAG00000016459	CPEB3	85	83.945	Fukomys_damarensis
ENSSDUG00000019766	cpeb3	100	85.373	ENSFHEG00000021371	cpeb3	100	81.739	Fundulus_heteroclitus
ENSSDUG00000019766	cpeb3	89	82.172	ENSGMOG00000008307	cpeb3	100	80.868	Gadus_morhua
ENSSDUG00000019766	cpeb3	100	76.957	ENSGALG00000006912	CPEB3	100	76.377	Gallus_gallus
ENSSDUG00000019766	cpeb3	99	85.447	ENSGACG00000002944	cpeb3	100	85.551	Gasterosteus_aculeatus
ENSSDUG00000019766	cpeb3	100	78.994	ENSGAGG00000008528	CPEB3	100	77.596	Gopherus_agassizii
ENSSDUG00000019766	cpeb3	100	72.284	ENSGGOG00000016441	CPEB3	100	72.028	Gorilla_gorilla
ENSSDUG00000019766	cpeb3	100	90.205	ENSHBUG00000004097	cpeb3	94	88.953	Haplochromis_burtoni
ENSSDUG00000019766	cpeb3	100	73.609	ENSHGLG00000014022	CPEB3	100	73.209	Heterocephalus_glaber_female
ENSSDUG00000019766	cpeb3	100	68.156	ENSHGLG00100005200	CPEB3	92	82.218	Heterocephalus_glaber_male
ENSSDUG00000019766	cpeb3	100	80.234	ENSHCOG00000005747	cpeb3	100	80.848	Hippocampus_comes
ENSSDUG00000019766	cpeb3	100	78.603	ENSIPUG00000018571	cpeb3	100	76.580	Ictalurus_punctatus
ENSSDUG00000019766	cpeb3	100	72.394	ENSSTOG00000028061	CPEB3	100	71.408	Ictidomys_tridecemlineatus
ENSSDUG00000019766	cpeb3	59	85.542	ENSJJAG00000009135	Cpeb3	100	85.542	Jaculus_jaculus
ENSSDUG00000019766	cpeb3	100	91.789	ENSLBEG00000025961	cpeb3	100	91.056	Labrus_bergylta
ENSSDUG00000019766	cpeb3	100	77.198	ENSLACG00000011307	CPEB3	93	76.183	Latimeria_chalumnae
ENSSDUG00000019766	cpeb3	100	85.672	ENSLOCG00000007131	cpeb3	100	79.798	Lepisosteus_oculatus
ENSSDUG00000019766	cpeb3	100	71.530	ENSLAFG00000018716	CPEB3	94	87.253	Loxodonta_africana
ENSSDUG00000019766	cpeb3	100	69.472	ENSMFAG00000025613	CPEB3	91	82.766	Macaca_fascicularis
ENSSDUG00000019766	cpeb3	100	75.216	ENSMMUG00000015050	CPEB3	100	74.640	Macaca_mulatta
ENSSDUG00000019766	cpeb3	100	74.605	ENSMNEG00000045465	CPEB3	100	73.458	Macaca_nemestrina
ENSSDUG00000019766	cpeb3	84	83.529	ENSMLEG00000031794	CPEB3	97	83.529	Mandrillus_leucophaeus
ENSSDUG00000019766	cpeb3	100	92.263	ENSMAMG00000012794	cpeb3	100	92.117	Mastacembelus_armatus
ENSSDUG00000019766	cpeb3	100	90.205	ENSMZEG00005012068	cpeb3	100	88.873	Maylandia_zebra
ENSSDUG00000019766	cpeb3	100	79.080	ENSMGAG00000009148	CPEB3	100	77.729	Meleagris_gallopavo
ENSSDUG00000019766	cpeb3	100	74.212	ENSMAUG00000002789	Cpeb3	100	74.069	Mesocricetus_auratus
ENSSDUG00000019766	cpeb3	100	71.927	ENSMICG00000026866	CPEB3	100	71.888	Microcebus_murinus
ENSSDUG00000019766	cpeb3	100	71.114	ENSMOCG00000016486	Cpeb3	100	70.839	Microtus_ochrogaster
ENSSDUG00000019766	cpeb3	97	94.044	ENSMMOG00000008209	cpeb3	88	94.044	Mola_mola
ENSSDUG00000019766	cpeb3	73	85.425	ENSMODG00000006673	CPEB3	68	85.425	Monodelphis_domestica
ENSSDUG00000019766	cpeb3	100	90.620	ENSMALG00000009305	cpeb3	99	94.815	Monopterus_albus
ENSSDUG00000019766	cpeb3	100	74.355	MGP_CAROLIEiJ_G0022910	Cpeb3	100	85.542	Mus_caroli
ENSSDUG00000019766	cpeb3	100	74.640	ENSMUSG00000039652	Cpeb3	100	85.542	Mus_musculus
ENSSDUG00000019766	cpeb3	100	74.175	MGP_PahariEiJ_G0014405	Cpeb3	100	85.542	Mus_pahari
ENSSDUG00000019766	cpeb3	100	74.319	MGP_SPRETEiJ_G0023829	Cpeb3	100	85.542	Mus_spretus
ENSSDUG00000019766	cpeb3	100	73.475	ENSMPUG00000017227	CPEB3	100	73.466	Mustela_putorius_furo
ENSSDUG00000019766	cpeb3	100	72.409	ENSNGAG00000015621	Cpeb3	100	71.569	Nannospalax_galili
ENSSDUG00000019766	cpeb3	100	92.504	ENSNBRG00000018343	cpeb3	92	92.560	Neolamprologus_brichardi
ENSSDUG00000019766	cpeb3	100	75.180	ENSNLEG00000012600	CPEB3	100	74.603	Nomascus_leucogenys
ENSSDUG00000019766	cpeb3	75	82.920	ENSMEUG00000009948	-	75	82.920	Notamacropus_eugenii
ENSSDUG00000019766	cpeb3	100	69.231	ENSODEG00000004591	CPEB3	100	68.970	Octodon_degus
ENSSDUG00000019766	cpeb3	100	71.191	ENSOCUG00000010454	CPEB3	100	70.222	Oryctolagus_cuniculus
ENSSDUG00000019766	cpeb3	100	83.207	ENSORLG00000000726	cpeb3	100	85.174	Oryzias_latipes
ENSSDUG00000019766	cpeb3	100	82.853	ENSORLG00020004475	cpeb3	100	85.432	Oryzias_latipes_hni
ENSSDUG00000019766	cpeb3	100	83.308	ENSORLG00015011683	cpeb3	100	85.888	Oryzias_latipes_hsok
ENSSDUG00000019766	cpeb3	100	83.763	ENSOMEG00000018265	cpeb3	93	83.886	Oryzias_melastigma
ENSSDUG00000019766	cpeb3	100	74.928	ENSOGAG00000002002	CPEB3	100	74.928	Otolemur_garnettii
ENSSDUG00000019766	cpeb3	100	74.566	ENSOARG00000016671	CPEB3	100	74.566	Ovis_aries
ENSSDUG00000019766	cpeb3	67	82.766	ENSPPAG00000031528	CPEB3	91	82.766	Pan_paniscus
ENSSDUG00000019766	cpeb3	100	74.569	ENSPPRG00000015654	CPEB3	100	74.566	Panthera_pardus
ENSSDUG00000019766	cpeb3	64	83.705	ENSPTIG00000012018	CPEB3	97	95.172	Panthera_tigris_altaica
ENSSDUG00000019766	cpeb3	100	71.350	ENSPTRG00000002753	CPEB3	100	70.718	Pan_troglodytes
ENSSDUG00000019766	cpeb3	100	71.608	ENSPANG00000021561	CPEB3	100	70.605	Papio_anubis
ENSSDUG00000019766	cpeb3	100	87.015	ENSPKIG00000015878	cpeb3	100	84.776	Paramormyrops_kingsleyae
ENSSDUG00000019766	cpeb3	100	75.037	ENSPMGG00000022722	cpeb3	100	74.627	Periophthalmus_magnuspinnatus
ENSSDUG00000019766	cpeb3	100	74.569	ENSPEMG00000008448	Cpeb3	100	74.282	Peromyscus_maniculatus_bairdii
ENSSDUG00000019766	cpeb3	100	71.389	ENSPCIG00000017302	CPEB3	100	71.114	Phascolarctos_cinereus
ENSSDUG00000019766	cpeb3	100	82.143	ENSPFOG00000011231	cpeb3	100	84.226	Poecilia_formosa
ENSSDUG00000019766	cpeb3	100	85.239	ENSPLAG00000002852	cpeb3	100	85.673	Poecilia_latipinna
ENSSDUG00000019766	cpeb3	100	84.949	ENSPMEG00000021572	cpeb3	100	85.528	Poecilia_mexicana
ENSSDUG00000019766	cpeb3	100	85.384	ENSPREG00000003085	cpeb3	100	85.673	Poecilia_reticulata
ENSSDUG00000019766	cpeb3	100	71.573	ENSPPYG00000002481	CPEB3	100	71.449	Pongo_abelii
ENSSDUG00000019766	cpeb3	100	66.713	ENSPCAG00000012417	CPEB3	100	65.881	Procavia_capensis
ENSSDUG00000019766	cpeb3	100	74.101	ENSPCOG00000023690	CPEB3	100	74.385	Propithecus_coquereli
ENSSDUG00000019766	cpeb3	81	83.602	ENSPVAG00000007664	CPEB3	74	83.602	Pteropus_vampyrus
ENSSDUG00000019766	cpeb3	100	90.205	ENSPNYG00000005300	cpeb3	100	89.017	Pundamilia_nyererei
ENSSDUG00000019766	cpeb3	100	81.567	ENSPNAG00000012111	cpeb3	100	79.320	Pygocentrus_nattereri
ENSSDUG00000019766	cpeb3	100	71.905	ENSRNOG00000020689	Cpeb3	95	70.685	Rattus_norvegicus
ENSSDUG00000019766	cpeb3	100	71.784	ENSRBIG00000041079	CPEB3	100	71.231	Rhinopithecus_bieti
ENSSDUG00000019766	cpeb3	100	75.289	ENSRROG00000031558	CPEB3	100	74.711	Rhinopithecus_roxellana
ENSSDUG00000019766	cpeb3	64	88.525	ENSSBOG00000035843	CPEB3	100	88.525	Saimiri_boliviensis_boliviensis
ENSSDUG00000019766	cpeb3	61	77.751	ENSSFOG00015018275	-	99	77.833	Scleropages_formosus
ENSSDUG00000019766	cpeb3	100	81.709	ENSSFOG00015004974	cpeb3	100	79.910	Scleropages_formosus
ENSSDUG00000019766	cpeb3	100	94.402	ENSSMAG00000013924	cpeb3	100	93.041	Scophthalmus_maximus
ENSSDUG00000019766	cpeb3	100	97.724	ENSSLDG00000021438	cpeb3	100	97.724	Seriola_lalandi_dorsalis
ENSSDUG00000019766	cpeb3	53	84.140	ENSSARG00000001994	CPEB3	100	84.140	Sorex_araneus
ENSSDUG00000019766	cpeb3	100	94.745	ENSSPAG00000004725	cpeb3	100	94.745	Stegastes_partitus
ENSSDUG00000019766	cpeb3	100	74.286	ENSSSCG00000010468	CPEB3	100	73.143	Sus_scrofa
ENSSDUG00000019766	cpeb3	100	76.184	ENSTGUG00000008988	CPEB3	100	75.466	Taeniopygia_guttata
ENSSDUG00000019766	cpeb3	61	76.471	ENSTBEG00000013125	-	60	76.471	Tupaia_belangeri
ENSSDUG00000019766	cpeb3	100	68.811	ENSTTRG00000012334	CPEB3	100	67.972	Tursiops_truncatus
ENSSDUG00000019766	cpeb3	100	70.694	ENSUAMG00000010827	CPEB3	90	89.256	Ursus_americanus
ENSSDUG00000019766	cpeb3	100	74.462	ENSVVUG00000021375	CPEB3	100	73.882	Vulpes_vulpes
ENSSDUG00000019766	cpeb3	100	72.459	ENSXETG00000012190	cpeb3	99	72.767	Xenopus_tropicalis
ENSSDUG00000019766	cpeb3	100	86.377	ENSXCOG00000006122	cpeb3	100	86.976	Xiphophorus_couchianus
ENSSDUG00000019766	cpeb3	100	84.731	ENSXMAG00000007652	cpeb3	94	98.630	Xiphophorus_maculatus