EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000019775 (Gene tree)
Gene ID: 111222869
Gene Symbol: rbm5
Alias: wu:fc25a08|wu:fe06f12
Full Name: RNA-binding protein 5-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 8948 bases
Position: chrBDQW01000109.1:1540270-1549217
Accession: 111222869
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000027311	zf-RanBP	PF00641.18	5.3e-10	1	1
ENSSDUP00000027311	RRM_1	PF00076.22	2.4e-12	1	2
ENSSDUP00000027311	RRM_1	PF00076.22	2.4e-12	2	2
ENSSDUP00000027311	G-patch	PF01585.23	2.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000027795	-	3144	XM_022746759	ENSSDUP00000027311	849 (aa)	XP_022602480	UPI000BBEE332

Gene Model

Click here to download ENSSDUG00000019775's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000019775's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000019775	rbm5	100	62.659	ENSG00000003756	RBM5	100	62.804	Homo_sapiens
ENSSDUG00000019775	rbm5	100	65.349	ENSAPOG00000006011	-	100	66.279	Acanthochromis_polyacanthus
ENSSDUG00000019775	rbm5	100	90.105	ENSAPOG00000016625	rbm5	100	90.221	Acanthochromis_polyacanthus
ENSSDUG00000019775	rbm5	100	62.543	ENSAMEG00000012005	RBM5	100	62.688	Ailuropoda_melanoleuca
ENSSDUG00000019775	rbm5	99	60.209	ENSACIG00000021310	-	99	58.285	Amphilophus_citrinellus
ENSSDUG00000019775	rbm5	65	88.800	ENSACIG00000007571	rbm5	100	87.200	Amphilophus_citrinellus
ENSSDUG00000019775	rbm5	99	63.072	ENSAOCG00000017312	-	99	63.306	Amphiprion_ocellaris
ENSSDUG00000019775	rbm5	100	90.454	ENSAOCG00000002880	rbm5	100	90.803	Amphiprion_ocellaris
ENSSDUG00000019775	rbm5	90	88.630	ENSAPEG00000011862	rbm5	92	88.760	Amphiprion_percula
ENSSDUG00000019775	rbm5	100	65.698	ENSAPEG00000018222	RBM5	100	65.930	Amphiprion_percula
ENSSDUG00000019775	rbm5	100	88.902	ENSATEG00000024663	rbm5	100	89.148	Anabas_testudineus
ENSSDUG00000019775	rbm5	100	67.241	ENSATEG00000003838	-	100	65.862	Anabas_testudineus
ENSSDUG00000019775	rbm5	93	64.000	ENSAPLG00000011176	RBM5	99	64.419	Anas_platyrhynchos
ENSSDUG00000019775	rbm5	100	59.797	ENSACAG00000008580	RBM5	100	61.530	Anolis_carolinensis
ENSSDUG00000019775	rbm5	100	62.312	ENSANAG00000025199	RBM5	100	62.804	Aotus_nancymaae
ENSSDUG00000019775	rbm5	100	89.566	ENSACLG00000012748	rbm5	100	89.449	Astatotilapia_calliptera
ENSSDUG00000019775	rbm5	89	78.049	ENSACLG00000024198	RBM5	100	78.571	Astatotilapia_calliptera
ENSSDUG00000019775	rbm5	84	77.072	ENSAMXG00000008146	rbm5	100	76.796	Astyanax_mexicanus
ENSSDUG00000019775	rbm5	100	62.428	ENSBTAG00000006330	RBM5	100	62.659	Bos_taurus
ENSSDUG00000019775	rbm5	100	62.543	ENSCJAG00000004740	RBM5	100	66.667	Callithrix_jacchus
ENSSDUG00000019775	rbm5	100	62.659	ENSCAFG00000010866	RBM5	100	62.804	Canis_familiaris
ENSSDUG00000019775	rbm5	100	62.659	ENSCAFG00020022126	RBM5	100	62.804	Canis_lupus_dingo
ENSSDUG00000019775	rbm5	100	62.543	ENSCHIG00000018435	RBM5	100	62.804	Capra_hircus
ENSSDUG00000019775	rbm5	86	60.618	ENSTSYG00000004158	RBM5	100	61.260	Carlito_syrichta
ENSSDUG00000019775	rbm5	100	50.992	ENSCAPG00000013495	RBM5	100	51.448	Cavia_aperea
ENSSDUG00000019775	rbm5	100	62.544	ENSCPOG00000008151	RBM5	100	62.688	Cavia_porcellus
ENSSDUG00000019775	rbm5	99	62.558	ENSCCAG00000026401	RBM5	100	61.982	Cebus_capucinus
ENSSDUG00000019775	rbm5	100	62.659	ENSCATG00000041038	RBM5	100	62.804	Cercocebus_atys
ENSSDUG00000019775	rbm5	100	62.747	ENSCLAG00000007873	RBM5	100	62.890	Chinchilla_lanigera
ENSSDUG00000019775	rbm5	100	62.659	ENSCSAG00000014401	RBM5	100	62.804	Chlorocebus_sabaeus
ENSSDUG00000019775	rbm5	81	57.692	ENSCHOG00000009429	RBM5	85	57.347	Choloepus_hoffmanni
ENSSDUG00000019775	rbm5	91	64.565	ENSCPBG00000002406	RBM5	100	62.785	Chrysemys_picta_bellii
ENSSDUG00000019775	rbm5	100	61.734	ENSCANG00000031250	RBM5	100	61.761	Colobus_angolensis_palliatus
ENSSDUG00000019775	rbm5	100	62.543	ENSCGRG00001010543	Rbm5	100	62.688	Cricetulus_griseus_chok1gshd
ENSSDUG00000019775	rbm5	100	62.543	ENSCGRG00000008475	Rbm5	100	62.688	Cricetulus_griseus_crigri
ENSSDUG00000019775	rbm5	98	84.552	ENSCSEG00000000596	rbm5	97	85.529	Cynoglossus_semilaevis
ENSSDUG00000019775	rbm5	100	81.301	ENSCVAG00000005655	rbm5	100	81.533	Cyprinodon_variegatus
ENSSDUG00000019775	rbm5	100	64.557	ENSDARG00000098280	rbm5	100	71.148	Danio_rerio
ENSSDUG00000019775	rbm5	100	62.761	ENSDNOG00000011756	RBM5	100	62.920	Dasypus_novemcinctus
ENSSDUG00000019775	rbm5	100	62.659	ENSDORG00000007692	Rbm5	100	62.688	Dipodomys_ordii
ENSSDUG00000019775	rbm5	91	61.347	ENSETEG00000012773	RBM5	93	60.967	Echinops_telfairi
ENSSDUG00000019775	rbm5	77	62.634	ENSEBUG00000017034	rbm5	84	62.634	Eptatretus_burgeri
ENSSDUG00000019775	rbm5	100	62.659	ENSEASG00005011835	RBM5	100	62.804	Equus_asinus_asinus
ENSSDUG00000019775	rbm5	100	62.659	ENSECAG00000020447	RBM5	100	62.804	Equus_caballus
ENSSDUG00000019775	rbm5	88	72.059	ENSEEUG00000005943	RBM5	88	69.756	Erinaceus_europaeus
ENSSDUG00000019775	rbm5	100	78.046	ENSELUG00000022467	rbm5	100	77.011	Esox_lucius
ENSSDUG00000019775	rbm5	100	62.413	ENSFCAG00000014639	RBM5	100	62.688	Felis_catus
ENSSDUG00000019775	rbm5	99	61.143	ENSFALG00000008828	RBM5	83	64.428	Ficedula_albicollis
ENSSDUG00000019775	rbm5	100	62.674	ENSFDAG00000001897	RBM5	100	62.674	Fukomys_damarensis
ENSSDUG00000019775	rbm5	92	97.619	ENSFHEG00000015954	rbm5	100	97.619	Fundulus_heteroclitus
ENSSDUG00000019775	rbm5	99	73.801	ENSGMOG00000016224	rbm5	100	74.503	Gadus_morhua
ENSSDUG00000019775	rbm5	100	50.583	ENSGMOG00000007810	-	100	49.184	Gadus_morhua
ENSSDUG00000019775	rbm5	92	63.774	ENSGALG00000039288	RBM5	83	64.544	Gallus_gallus
ENSSDUG00000019775	rbm5	100	82.674	ENSGAFG00000010690	rbm5	100	83.140	Gambusia_affinis
ENSSDUG00000019775	rbm5	100	82.827	ENSGACG00000010469	rbm5	100	83.141	Gasterosteus_aculeatus
ENSSDUG00000019775	rbm5	100	62.857	ENSGACG00000000858	-	100	62.801	Gasterosteus_aculeatus
ENSSDUG00000019775	rbm5	96	61.364	ENSGAGG00000007935	RBM5	99	62.053	Gopherus_agassizii
ENSSDUG00000019775	rbm5	100	62.659	ENSGGOG00000014490	RBM5	100	62.804	Gorilla_gorilla
ENSSDUG00000019775	rbm5	100	88.502	ENSHBUG00000001941	rbm5	100	88.850	Haplochromis_burtoni
ENSSDUG00000019775	rbm5	89	78.049	ENSHBUG00000011901	-	100	78.571	Haplochromis_burtoni
ENSSDUG00000019775	rbm5	100	62.442	ENSHGLG00000014844	RBM5	100	62.702	Heterocephalus_glaber_female
ENSSDUG00000019775	rbm5	100	62.515	ENSHGLG00100010739	RBM5	100	62.804	Heterocephalus_glaber_male
ENSSDUG00000019775	rbm5	100	56.550	ENSHCOG00000004536	-	100	56.332	Hippocampus_comes
ENSSDUG00000019775	rbm5	96	80.732	ENSHCOG00000017110	rbm5	99	81.585	Hippocampus_comes
ENSSDUG00000019775	rbm5	100	75.641	ENSIPUG00000000640	rbm5	100	75.669	Ictalurus_punctatus
ENSSDUG00000019775	rbm5	100	62.775	ENSSTOG00000013856	RBM5	100	62.920	Ictidomys_tridecemlineatus
ENSSDUG00000019775	rbm5	100	62.775	ENSJJAG00000008844	Rbm5	100	63.152	Jaculus_jaculus
ENSSDUG00000019775	rbm5	100	85.099	ENSKMAG00000006663	rbm5	100	84.633	Kryptolebias_marmoratus
ENSSDUG00000019775	rbm5	100	63.079	ENSLBEG00000010877	-	94	62.312	Labrus_bergylta
ENSSDUG00000019775	rbm5	100	89.136	ENSLBEG00000020858	rbm5	100	88.435	Labrus_bergylta
ENSSDUG00000019775	rbm5	56	67.000	ENSLBEG00000002522	-	85	68.166	Labrus_bergylta
ENSSDUG00000019775	rbm5	100	71.380	ENSLOCG00000010774	rbm5	100	71.494	Lepisosteus_oculatus
ENSSDUG00000019775	rbm5	100	62.065	ENSLAFG00000006733	RBM5	100	62.616	Loxodonta_africana
ENSSDUG00000019775	rbm5	100	62.659	ENSMFAG00000031609	RBM5	100	62.804	Macaca_fascicularis
ENSSDUG00000019775	rbm5	99	62.558	ENSMMUG00000004921	RBM5	99	62.704	Macaca_mulatta
ENSSDUG00000019775	rbm5	100	62.775	ENSMNEG00000044394	RBM5	100	62.920	Macaca_nemestrina
ENSSDUG00000019775	rbm5	100	61.395	ENSMLEG00000034689	RBM5	100	61.707	Mandrillus_leucophaeus
ENSSDUG00000019775	rbm5	100	67.283	ENSMAMG00000023948	-	100	62.384	Mastacembelus_armatus
ENSSDUG00000019775	rbm5	91	100.000	ENSMAMG00000017277	rbm5	99	100.000	Mastacembelus_armatus
ENSSDUG00000019775	rbm5	100	89.566	ENSMZEG00005015328	rbm5	100	89.449	Maylandia_zebra
ENSSDUG00000019775	rbm5	100	61.866	ENSMZEG00005010035	-	100	62.299	Maylandia_zebra
ENSSDUG00000019775	rbm5	92	63.899	ENSMGAG00000003972	RBM5	99	64.573	Meleagris_gallopavo
ENSSDUG00000019775	rbm5	99	62.354	ENSMAUG00000020572	Rbm5	98	62.587	Mesocricetus_auratus
ENSSDUG00000019775	rbm5	100	62.659	ENSMICG00000016179	RBM5	100	62.804	Microcebus_murinus
ENSSDUG00000019775	rbm5	100	62.890	ENSMOCG00000017479	Rbm5	100	63.036	Microtus_ochrogaster
ENSSDUG00000019775	rbm5	90	61.538	ENSMMOG00000021804	-	99	53.310	Mola_mola
ENSSDUG00000019775	rbm5	100	72.778	ENSMMOG00000015342	rbm5	100	72.345	Mola_mola
ENSSDUG00000019775	rbm5	100	61.789	ENSMODG00000012301	RBM5	100	62.688	Monodelphis_domestica
ENSSDUG00000019775	rbm5	100	63.921	ENSMALG00000016769	-	100	63.457	Monopterus_albus
ENSSDUG00000019775	rbm5	99	74.796	ENSMALG00000000609	rbm5	99	75.638	Monopterus_albus
ENSSDUG00000019775	rbm5	100	62.065	MGP_CAROLIEiJ_G0032660	Rbm5	100	64.202	Mus_caroli
ENSSDUG00000019775	rbm5	100	62.181	ENSMUSG00000032580	Rbm5	100	64.202	Mus_musculus
ENSSDUG00000019775	rbm5	100	62.181	MGP_PahariEiJ_G0015528	Rbm5	100	64.202	Mus_pahari
ENSSDUG00000019775	rbm5	100	62.181	MGP_SPRETEiJ_G0033805	Rbm5	100	64.202	Mus_spretus
ENSSDUG00000019775	rbm5	100	63.341	ENSMLUG00000007875	RBM5	100	63.542	Myotis_lucifugus
ENSSDUG00000019775	rbm5	100	62.225	ENSNGAG00000011777	Rbm5	100	62.688	Nannospalax_galili
ENSSDUG00000019775	rbm5	100	88.618	ENSNBRG00000018097	rbm5	100	88.966	Neolamprologus_brichardi
ENSSDUG00000019775	rbm5	98	59.743	ENSNBRG00000004400	RBM5	97	60.504	Neolamprologus_brichardi
ENSSDUG00000019775	rbm5	100	62.543	ENSNLEG00000006943	RBM5	100	62.688	Nomascus_leucogenys
ENSSDUG00000019775	rbm5	99	57.126	ENSMEUG00000012994	RBM5	100	58.673	Notamacropus_eugenii
ENSSDUG00000019775	rbm5	91	61.869	ENSOPRG00000015154	RBM5	93	61.278	Ochotona_princeps
ENSSDUG00000019775	rbm5	100	62.631	ENSODEG00000016254	-	100	62.890	Octodon_degus
ENSSDUG00000019775	rbm5	100	60.839	ENSODEG00000019111	-	100	59.907	Octodon_degus
ENSSDUG00000019775	rbm5	100	62.903	ENSONIG00000019007	RBM5	100	63.018	Oreochromis_niloticus
ENSSDUG00000019775	rbm5	100	89.082	ENSONIG00000004107	rbm5	100	89.315	Oreochromis_niloticus
ENSSDUG00000019775	rbm5	88	64.163	ENSOANG00000006557	RBM5	100	63.373	Ornithorhynchus_anatinus
ENSSDUG00000019775	rbm5	100	62.197	ENSOCUG00000011652	RBM5	100	62.312	Oryctolagus_cuniculus
ENSSDUG00000019775	rbm5	95	84.333	ENSORLG00000003369	rbm5	99	83.966	Oryzias_latipes
ENSSDUG00000019775	rbm5	100	57.648	ENSORLG00000001053	-	100	57.617	Oryzias_latipes
ENSSDUG00000019775	rbm5	96	57.040	ENSORLG00020006782	-	98	57.246	Oryzias_latipes_hni
ENSSDUG00000019775	rbm5	100	84.714	ENSORLG00020021744	rbm5	100	84.364	Oryzias_latipes_hni
ENSSDUG00000019775	rbm5	91	95.238	ENSORLG00015018379	rbm5	99	95.238	Oryzias_latipes_hsok
ENSSDUG00000019775	rbm5	96	56.919	ENSORLG00015002854	-	98	57.246	Oryzias_latipes_hsok
ENSSDUG00000019775	rbm5	66	69.792	ENSOMEG00000010653	-	87	68.306	Oryzias_melastigma
ENSSDUG00000019775	rbm5	100	84.732	ENSOMEG00000002219	rbm5	100	84.149	Oryzias_melastigma
ENSSDUG00000019775	rbm5	92	63.317	ENSOGAG00000004205	RBM5	99	62.437	Otolemur_garnettii
ENSSDUG00000019775	rbm5	100	62.543	ENSOARG00000010923	RBM5	100	62.804	Ovis_aries
ENSSDUG00000019775	rbm5	100	62.659	ENSPPAG00000043010	RBM5	100	62.804	Pan_paniscus
ENSSDUG00000019775	rbm5	100	62.413	ENSPPRG00000005404	RBM5	100	62.688	Panthera_pardus
ENSSDUG00000019775	rbm5	100	62.413	ENSPTIG00000000962	RBM5	100	62.688	Panthera_tigris_altaica
ENSSDUG00000019775	rbm5	100	62.659	ENSPTRG00000014946	RBM5	100	62.804	Pan_troglodytes
ENSSDUG00000019775	rbm5	100	62.659	ENSPANG00000018507	RBM5	100	62.804	Papio_anubis
ENSSDUG00000019775	rbm5	77	57.164	ENSPKIG00000019187	-	100	56.737	Paramormyrops_kingsleyae
ENSSDUG00000019775	rbm5	100	69.741	ENSPKIG00000024837	RBM5	100	71.445	Paramormyrops_kingsleyae
ENSSDUG00000019775	rbm5	88	63.947	ENSPSIG00000016073	RBM5	100	63.421	Pelodiscus_sinensis
ENSSDUG00000019775	rbm5	88	82.051	ENSPMGG00000004719	-	99	80.952	Periophthalmus_magnuspinnatus
ENSSDUG00000019775	rbm5	79	64.317	ENSPMGG00000017347	rbm5	100	64.620	Periophthalmus_magnuspinnatus
ENSSDUG00000019775	rbm5	99	45.096	ENSPMAG00000001998	rbm5	99	44.765	Petromyzon_marinus
ENSSDUG00000019775	rbm5	100	61.468	ENSPCIG00000021531	RBM5	100	62.804	Phascolarctos_cinereus
ENSSDUG00000019775	rbm5	100	82.346	ENSPLAG00000006318	rbm5	100	82.811	Poecilia_latipinna
ENSSDUG00000019775	rbm5	100	81.744	ENSPMEG00000004295	rbm5	100	82.791	Poecilia_mexicana
ENSSDUG00000019775	rbm5	74	72.785	ENSPMEG00000008651	rbm5	99	73.418	Poecilia_mexicana
ENSSDUG00000019775	rbm5	100	83.023	ENSPREG00000003795	rbm5	100	83.140	Poecilia_reticulata
ENSSDUG00000019775	rbm5	61	65.044	ENSPCAG00000005459	RBM5	73	64.574	Procavia_capensis
ENSSDUG00000019775	rbm5	100	62.529	ENSPCOG00000025840	RBM5	100	62.804	Propithecus_coquereli
ENSSDUG00000019775	rbm5	100	60.093	ENSPVAG00000006812	RBM5	100	59.907	Pteropus_vampyrus
ENSSDUG00000019775	rbm5	83	62.810	ENSPNYG00000006361	RBM5	99	63.324	Pundamilia_nyererei
ENSSDUG00000019775	rbm5	100	88.618	ENSPNYG00000014787	rbm5	100	88.966	Pundamilia_nyererei
ENSSDUG00000019775	rbm5	100	75.404	ENSPNAG00000012070	rbm5	100	75.866	Pygocentrus_nattereri
ENSSDUG00000019775	rbm5	100	61.833	ENSRNOG00000018153	Rbm5	100	62.572	Rattus_norvegicus
ENSSDUG00000019775	rbm5	100	62.890	ENSRBIG00000012679	RBM5	100	62.920	Rhinopithecus_bieti
ENSSDUG00000019775	rbm5	100	62.890	ENSRROG00000041331	RBM5	100	62.920	Rhinopithecus_roxellana
ENSSDUG00000019775	rbm5	100	62.659	ENSSBOG00000006324	RBM5	100	62.804	Saimiri_boliviensis_boliviensis
ENSSDUG00000019775	rbm5	100	61.905	ENSSHAG00000018260	RBM5	100	62.804	Sarcophilus_harrisii
ENSSDUG00000019775	rbm5	100	75.203	ENSSFOG00015019052	rbm5	94	73.928	Scleropages_formosus
ENSSDUG00000019775	rbm5	100	70.034	ENSSFOG00015019645	-	100	71.642	Scleropages_formosus
ENSSDUG00000019775	rbm5	100	90.023	ENSSMAG00000017106	rbm5	100	88.850	Scophthalmus_maximus
ENSSDUG00000019775	rbm5	100	65.442	ENSSLDG00000015996	-	100	66.820	Seriola_lalandi_dorsalis
ENSSDUG00000019775	rbm5	100	99.176	ENSSLDG00000002329	rbm5	100	99.176	Seriola_lalandi_dorsalis
ENSSDUG00000019775	rbm5	58	76.923	ENSSARG00000009724	-	63	74.359	Sorex_araneus
ENSSDUG00000019775	rbm5	100	57.340	ENSSPUG00000001876	RBM5	87	61.263	Sphenodon_punctatus
ENSSDUG00000019775	rbm5	100	65.820	ENSSPAG00000020011	-	100	65.935	Stegastes_partitus
ENSSDUG00000019775	rbm5	100	89.671	ENSSPAG00000019638	rbm5	100	90.493	Stegastes_partitus
ENSSDUG00000019775	rbm5	92	73.810	ENSSSCG00000011395	RBM5	100	73.810	Sus_scrofa
ENSSDUG00000019775	rbm5	92	57.755	ENSTGUG00000006417	RBM5	98	59.850	Taeniopygia_guttata
ENSSDUG00000019775	rbm5	100	84.346	ENSTRUG00000008292	rbm5	100	84.987	Takifugu_rubripes
ENSSDUG00000019775	rbm5	99	58.124	ENSTNIG00000014742	rbm5	98	80.357	Tetraodon_nigroviridis
ENSSDUG00000019775	rbm5	100	56.647	ENSTBEG00000005424	RBM5	100	57.010	Tupaia_belangeri
ENSSDUG00000019775	rbm5	91	59.470	ENSTTRG00000007717	RBM5	100	57.290	Tursiops_truncatus
ENSSDUG00000019775	rbm5	100	62.543	ENSUAMG00000028347	RBM5	100	62.688	Ursus_americanus
ENSSDUG00000019775	rbm5	100	62.543	ENSUMAG00000022027	RBM5	100	62.688	Ursus_maritimus
ENSSDUG00000019775	rbm5	89	60.931	ENSVPAG00000009388	RBM5	97	61.417	Vicugna_pacos
ENSSDUG00000019775	rbm5	100	62.659	ENSVVUG00000028647	RBM5	100	62.804	Vulpes_vulpes
ENSSDUG00000019775	rbm5	100	83.140	ENSXMAG00000016369	rbm5	100	83.256	Xiphophorus_maculatus