EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000019831 (Gene tree)
Gene ID: -
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 14987 bases
Position: chrBDQW01000319.1:2036653-2051639
Accession: 111231832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000027460	ResIII	PF04851.15	2.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000027944	-	2625	XM_022759084	ENSSDUP00000027460	874 (aa)	XP_022614805	-

Gene Model

Click here to download ENSSDUG00000019831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000019831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000019831	chd1l	51	38.012	ENSSDUG00000022338	smarcad1a	61	38.012
ENSSDUG00000019831	chd1l	51	32.290	ENSSDUG00000001122	rad54b	52	32.290
ENSSDUG00000019831	chd1l	61	42.077	ENSSDUG00000020690	smarca5	53	41.894
ENSSDUG00000019831	chd1l	57	36.887	ENSSDUG00000016924	hells	76	36.717
ENSSDUG00000019831	chd1l	51	32.604	ENSSDUG00000019147	rad54l	68	32.604

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000019831	chd1l	94	64.167	ENSG00000131778	CHD1L	98	64.909	Homo_sapiens
ENSSDUG00000019831	chd1l	95	87.886	ENSAPOG00000001539	chd1l	97	87.603	Acanthochromis_polyacanthus
ENSSDUG00000019831	chd1l	94	65.357	ENSAMEG00000017063	CHD1L	93	65.000	Ailuropoda_melanoleuca
ENSSDUG00000019831	chd1l	95	83.451	ENSACIG00000001164	chd1l	97	83.685	Amphilophus_citrinellus
ENSSDUG00000019831	chd1l	93	88.129	ENSAOCG00000014510	chd1l	83	87.843	Amphiprion_ocellaris
ENSSDUG00000019831	chd1l	95	83.669	ENSAPEG00000017573	chd1l	93	83.529	Amphiprion_percula
ENSSDUG00000019831	chd1l	93	84.394	ENSAPEG00000017450	chd1l	92	84.129	Amphiprion_percula
ENSSDUG00000019831	chd1l	94	88.623	ENSATEG00000013058	chd1l	90	88.623	Anabas_testudineus
ENSSDUG00000019831	chd1l	95	62.824	ENSAPLG00000009976	CHD1L	94	62.824	Anas_platyrhynchos
ENSSDUG00000019831	chd1l	95	61.264	ENSACAG00000017686	CHD1L	97	60.909	Anolis_carolinensis
ENSSDUG00000019831	chd1l	94	64.133	ENSANAG00000024347	CHD1L	94	63.529	Aotus_nancymaae
ENSSDUG00000019831	chd1l	95	83.962	ENSACLG00000019304	chd1l	94	82.864	Astatotilapia_calliptera
ENSSDUG00000019831	chd1l	95	65.248	ENSAMXG00000012367	chd1l	85	65.248	Astyanax_mexicanus
ENSSDUG00000019831	chd1l	95	65.161	ENSBTAG00000020831	CHD1L	94	65.161	Bos_taurus
ENSSDUG00000019831	chd1l	94	64.252	ENSCJAG00000002406	CHD1L	94	63.647	Callithrix_jacchus
ENSSDUG00000019831	chd1l	95	61.692	ENSCAFG00000010944	CHD1L	95	61.692	Canis_familiaris
ENSSDUG00000019831	chd1l	96	62.442	ENSCAFG00020020121	CHD1L	96	64.090	Canis_lupus_dingo
ENSSDUG00000019831	chd1l	95	65.398	ENSCHIG00000013871	CHD1L	95	65.012	Capra_hircus
ENSSDUG00000019831	chd1l	94	64.516	ENSTSYG00000003005	CHD1L	99	63.744	Carlito_syrichta
ENSSDUG00000019831	chd1l	94	62.604	ENSCPOG00000009000	CHD1L	95	62.500	Cavia_porcellus
ENSSDUG00000019831	chd1l	94	61.758	ENSCCAG00000036079	CHD1L	94	61.176	Cebus_capucinus
ENSSDUG00000019831	chd1l	94	64.209	ENSCATG00000031044	CHD1L	94	63.604	Cercocebus_atys
ENSSDUG00000019831	chd1l	95	63.830	ENSCLAG00000000880	CHD1L	95	63.807	Chinchilla_lanigera
ENSSDUG00000019831	chd1l	94	64.328	ENSCSAG00000018386	CHD1L	94	63.925	Chlorocebus_sabaeus
ENSSDUG00000019831	chd1l	94	64.804	ENSCPBG00000002600	CHD1L	97	63.499	Chrysemys_picta_bellii
ENSSDUG00000019831	chd1l	94	64.167	ENSCANG00000020239	CHD1L	94	63.561	Colobus_angolensis_palliatus
ENSSDUG00000019831	chd1l	93	65.550	ENSCGRG00001021624	Chd1l	94	65.311	Cricetulus_griseus_chok1gshd
ENSSDUG00000019831	chd1l	93	65.338	ENSCGRG00000007554	Chd1l	98	65.338	Cricetulus_griseus_crigri
ENSSDUG00000019831	chd1l	95	81.272	ENSCVAG00000002595	chd1l	89	81.390	Cyprinodon_variegatus
ENSSDUG00000019831	chd1l	95	73.554	ENSDARG00000015471	chd1l	84	72.101	Danio_rerio
ENSSDUG00000019831	chd1l	95	64.664	ENSDNOG00000019504	CHD1L	94	64.193	Dasypus_novemcinctus
ENSSDUG00000019831	chd1l	95	62.937	ENSDORG00000013555	Chd1l	95	63.054	Dipodomys_ordii
ENSSDUG00000019831	chd1l	86	61.939	ENSETEG00000008445	CHD1L	85	61.759	Echinops_telfairi
ENSSDUG00000019831	chd1l	64	76.087	ENSEBUG00000005791	chd1l	75	76.087	Eptatretus_burgeri
ENSSDUG00000019831	chd1l	95	64.630	ENSEASG00005007364	CHD1L	99	64.382	Equus_asinus_asinus
ENSSDUG00000019831	chd1l	95	64.512	ENSECAG00000008915	CHD1L	99	64.259	Equus_caballus
ENSSDUG00000019831	chd1l	95	63.744	ENSELUG00000016844	chd1l	82	63.380	Esox_lucius
ENSSDUG00000019831	chd1l	95	64.142	ENSFCAG00000007777	CHD1L	94	63.882	Felis_catus
ENSSDUG00000019831	chd1l	94	62.932	ENSFALG00000006087	CHD1L	93	62.932	Ficedula_albicollis
ENSSDUG00000019831	chd1l	94	63.971	ENSFDAG00000012431	CHD1L	98	63.971	Fukomys_damarensis
ENSSDUG00000019831	chd1l	98	80.549	ENSFHEG00000012420	chd1l	87	80.664	Fundulus_heteroclitus
ENSSDUG00000019831	chd1l	96	62.500	ENSGALG00000015038	CHD1L	95	62.500	Gallus_gallus
ENSSDUG00000019831	chd1l	95	81.434	ENSGAFG00000018198	chd1l	98	77.673	Gambusia_affinis
ENSSDUG00000019831	chd1l	58	84.570	ENSGACG00000014042	chd1l	98	84.570	Gasterosteus_aculeatus
ENSSDUG00000019831	chd1l	94	65.012	ENSGAGG00000014432	CHD1L	96	64.539	Gopherus_agassizii
ENSSDUG00000019831	chd1l	94	63.929	ENSGGOG00000001067	CHD1L	94	63.400	Gorilla_gorilla
ENSSDUG00000019831	chd1l	97	82.110	ENSHBUG00000007464	chd1l	98	82.110	Haplochromis_burtoni
ENSSDUG00000019831	chd1l	93	63.202	ENSHGLG00000008933	CHD1L	94	63.321	Heterocephalus_glaber_female
ENSSDUG00000019831	chd1l	93	62.230	ENSHGLG00100007155	CHD1L	97	62.350	Heterocephalus_glaber_male
ENSSDUG00000019831	chd1l	93	80.024	ENSHCOG00000012787	chd1l	92	80.024	Hippocampus_comes
ENSSDUG00000019831	chd1l	98	67.314	ENSIPUG00000022617	chd1l	86	66.855	Ictalurus_punctatus
ENSSDUG00000019831	chd1l	96	59.016	ENSSTOG00000007032	CHD1L	96	59.133	Ictidomys_tridecemlineatus
ENSSDUG00000019831	chd1l	93	83.852	ENSKMAG00000014358	chd1l	82	83.612	Kryptolebias_marmoratus
ENSSDUG00000019831	chd1l	97	81.839	ENSLBEG00000023845	chd1l	96	85.000	Labrus_bergylta
ENSSDUG00000019831	chd1l	94	60.234	ENSLACG00000006262	CHD1L	84	60.702	Latimeria_chalumnae
ENSSDUG00000019831	chd1l	93	74.038	ENSLOCG00000010574	chd1l	83	74.038	Lepisosteus_oculatus
ENSSDUG00000019831	chd1l	95	63.817	ENSLAFG00000018136	CHD1L	99	63.732	Loxodonta_africana
ENSSDUG00000019831	chd1l	95	63.787	ENSMFAG00000043562	CHD1L	99	63.647	Macaca_fascicularis
ENSSDUG00000019831	chd1l	94	64.328	ENSMMUG00000009024	CHD1L	94	63.722	Macaca_mulatta
ENSSDUG00000019831	chd1l	94	64.328	ENSMNEG00000039905	CHD1L	94	63.722	Macaca_nemestrina
ENSSDUG00000019831	chd1l	94	64.328	ENSMLEG00000030900	CHD1L	94	63.722	Mandrillus_leucophaeus
ENSSDUG00000019831	chd1l	93	87.247	ENSMAMG00000012822	chd1l	96	84.982	Mastacembelus_armatus
ENSSDUG00000019831	chd1l	95	84.080	ENSMZEG00005020830	chd1l	85	84.080	Maylandia_zebra
ENSSDUG00000019831	chd1l	95	62.867	ENSMGAG00000014304	CHD1L	99	62.867	Meleagris_gallopavo
ENSSDUG00000019831	chd1l	94	65.119	ENSMICG00000002497	CHD1L	94	64.664	Microcebus_murinus
ENSSDUG00000019831	chd1l	95	64.294	ENSMOCG00000006305	Chd1l	95	64.411	Microtus_ochrogaster
ENSSDUG00000019831	chd1l	96	77.558	ENSMMOG00000005964	chd1l	91	77.003	Mola_mola
ENSSDUG00000019831	chd1l	94	63.777	ENSMODG00000018717	CHD1L	95	63.400	Monodelphis_domestica
ENSSDUG00000019831	chd1l	93	88.411	ENSMALG00000014675	chd1l	83	88.361	Monopterus_albus
ENSSDUG00000019831	chd1l	95	64.277	MGP_CAROLIEiJ_G0025401	Chd1l	95	64.277	Mus_caroli
ENSSDUG00000019831	chd1l	94	64.202	ENSMUSG00000028089	Chd1l	95	63.869	Mus_musculus
ENSSDUG00000019831	chd1l	94	64.846	MGP_PahariEiJ_G0026845	Chd1l	94	64.846	Mus_pahari
ENSSDUG00000019831	chd1l	94	64.573	MGP_SPRETEiJ_G0026347	Chd1l	95	64.235	Mus_spretus
ENSSDUG00000019831	chd1l	95	64.900	ENSMPUG00000000615	CHD1L	94	64.547	Mustela_putorius_furo
ENSSDUG00000019831	chd1l	93	64.294	ENSMLUG00000007573	CHD1L	95	62.299	Myotis_lucifugus
ENSSDUG00000019831	chd1l	95	60.303	ENSNGAG00000000908	Chd1l	97	59.674	Nannospalax_galili
ENSSDUG00000019831	chd1l	98	78.449	ENSNBRG00000006021	chd1l	95	79.019	Neolamprologus_brichardi
ENSSDUG00000019831	chd1l	94	63.496	ENSNLEG00000000179	CHD1L	94	62.898	Nomascus_leucogenys
ENSSDUG00000019831	chd1l	95	54.009	ENSOPRG00000006973	CHD1L	92	63.137	Ochotona_princeps
ENSSDUG00000019831	chd1l	94	59.788	ENSODEG00000002494	CHD1L	95	59.883	Octodon_degus
ENSSDUG00000019831	chd1l	95	84.316	ENSONIG00000003183	chd1l	86	84.788	Oreochromis_niloticus
ENSSDUG00000019831	chd1l	86	60.077	ENSOANG00000003068	CHD1L	93	60.414	Ornithorhynchus_anatinus
ENSSDUG00000019831	chd1l	94	60.814	ENSOCUG00000009336	CHD1L	94	60.323	Oryctolagus_cuniculus
ENSSDUG00000019831	chd1l	97	77.842	ENSORLG00000003673	chd1l	95	77.520	Oryzias_latipes
ENSSDUG00000019831	chd1l	95	79.765	ENSORLG00020005123	chd1l	92	77.676	Oryzias_latipes_hni
ENSSDUG00000019831	chd1l	98	77.867	ENSORLG00015001680	chd1l	96	79.331	Oryzias_latipes_hsok
ENSSDUG00000019831	chd1l	71	80.688	ENSOMEG00000006109	chd1l	76	80.153	Oryzias_melastigma
ENSSDUG00000019831	chd1l	95	63.712	ENSOGAG00000008775	CHD1L	94	63.475	Otolemur_garnettii
ENSSDUG00000019831	chd1l	95	65.279	ENSOARG00000020547	CHD1L	98	65.316	Ovis_aries
ENSSDUG00000019831	chd1l	96	63.455	ENSPPAG00000039193	CHD1L	99	63.480	Pan_paniscus
ENSSDUG00000019831	chd1l	93	64.952	ENSPPRG00000010258	CHD1L	93	64.952	Panthera_pardus
ENSSDUG00000019831	chd1l	96	63.455	ENSPTRG00000001220	CHD1L	95	63.561	Pan_troglodytes
ENSSDUG00000019831	chd1l	96	62.831	ENSPANG00000009170	CHD1L	94	63.722	Papio_anubis
ENSSDUG00000019831	chd1l	95	72.577	ENSPKIG00000022166	chd1l	94	71.499	Paramormyrops_kingsleyae
ENSSDUG00000019831	chd1l	94	64.685	ENSPSIG00000012595	CHD1L	96	63.048	Pelodiscus_sinensis
ENSSDUG00000019831	chd1l	95	63.668	ENSPEMG00000013528	Chd1l	95	63.869	Peromyscus_maniculatus_bairdii
ENSSDUG00000019831	chd1l	90	64.099	ENSPCIG00000030409	CHD1L	97	64.099	Phascolarctos_cinereus
ENSSDUG00000019831	chd1l	98	78.702	ENSPFOG00000015948	chd1l	86	78.929	Poecilia_formosa
ENSSDUG00000019831	chd1l	98	79.162	ENSPLAG00000015145	chd1l	95	81.294	Poecilia_latipinna
ENSSDUG00000019831	chd1l	97	79.263	ENSPMEG00000008720	chd1l	91	79.724	Poecilia_mexicana
ENSSDUG00000019831	chd1l	95	81.883	ENSPREG00000017885	chd1l	96	81.883	Poecilia_reticulata
ENSSDUG00000019831	chd1l	94	64.090	ENSPPYG00000000946	CHD1L	94	63.486	Pongo_abelii
ENSSDUG00000019831	chd1l	89	59.142	ENSPCAG00000005959	CHD1L	89	59.097	Procavia_capensis
ENSSDUG00000019831	chd1l	93	60.168	ENSPVAG00000006084	CHD1L	98	60.048	Pteropus_vampyrus
ENSSDUG00000019831	chd1l	97	82.394	ENSPNYG00000013001	chd1l	97	82.394	Pundamilia_nyererei
ENSSDUG00000019831	chd1l	95	72.674	ENSPNAG00000011881	chd1l	85	71.119	Pygocentrus_nattereri
ENSSDUG00000019831	chd1l	95	64.144	ENSRNOG00000017669	Chd1l	95	64.028	Rattus_norvegicus
ENSSDUG00000019831	chd1l	94	64.167	ENSRBIG00000041272	CHD1L	94	63.765	Rhinopithecus_bieti
ENSSDUG00000019831	chd1l	94	64.362	ENSRROG00000041354	CHD1L	94	64.508	Rhinopithecus_roxellana
ENSSDUG00000019831	chd1l	94	62.813	ENSSHAG00000017395	CHD1L	94	62.441	Sarcophilus_harrisii
ENSSDUG00000019831	chd1l	95	72.931	ENSSFOG00015003649	chd1l	96	71.513	Scleropages_formosus
ENSSDUG00000019831	chd1l	94	85.190	ENSSMAG00000019377	chd1l	94	84.806	Scophthalmus_maximus
ENSSDUG00000019831	chd1l	100	96.614	ENSSLDG00000012714	chd1l	100	96.614	Seriola_lalandi_dorsalis
ENSSDUG00000019831	chd1l	96	61.324	ENSSPUG00000016865	CHD1L	97	61.789	Sphenodon_punctatus
ENSSDUG00000019831	chd1l	93	87.081	ENSSPAG00000017653	chd1l	89	86.801	Stegastes_partitus
ENSSDUG00000019831	chd1l	95	62.676	ENSSSCG00000006701	CHD1L	96	62.676	Sus_scrofa
ENSSDUG00000019831	chd1l	94	62.932	ENSTGUG00000013392	-	96	63.051	Taeniopygia_guttata
ENSSDUG00000019831	chd1l	93	69.194	ENSTNIG00000004902	chd1l	99	68.833	Tetraodon_nigroviridis
ENSSDUG00000019831	chd1l	94	62.069	ENSTTRG00000011711	CHD1L	98	61.712	Tursiops_truncatus
ENSSDUG00000019831	chd1l	98	63.314	ENSUAMG00000021991	CHD1L	97	64.133	Ursus_americanus
ENSSDUG00000019831	chd1l	98	63.314	ENSUMAG00000009733	CHD1L	96	64.734	Ursus_maritimus
ENSSDUG00000019831	chd1l	95	63.572	ENSVVUG00000007316	CHD1L	90	63.572	Vulpes_vulpes
ENSSDUG00000019831	chd1l	95	80.213	ENSXCOG00000008336	chd1l	83	80.213	Xiphophorus_couchianus
ENSSDUG00000019831	chd1l	95	82.172	ENSXMAG00000015898	chd1l	96	78.391	Xiphophorus_maculatus