EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000019840 (Gene tree)
Gene ID: 111220433
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 23597 bases
Position: chrBDQW01000068.1:7952129-7975725
Accession: 111220433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000027556	RNA_pol_Rpb1_5	PF04998.17	2.2e-88	1	1
ENSSDUP00000027502	RNA_pol_Rpb1_5	PF04998.17	2.5e-88	1	1
ENSSDUP00000027502	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSSDUP00000027556	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSSDUP00000027556	RNA_pol_Rpb1_2	PF00623.20	2.4e-73	1	1
ENSSDUP00000027502	RNA_pol_Rpb1_2	PF00623.20	3.4e-73	1	1
ENSSDUP00000027502	RNA_pol_Rpb1_3	PF04983.18	2.9e-40	1	1
ENSSDUP00000027556	RNA_pol_Rpb1_3	PF04983.18	2.4e-31	1	1
ENSSDUP00000027556	RNA_pol_Rpb1_1	PF04997.12	2.5e-92	1	1
ENSSDUP00000027502	RNA_pol_Rpb1_1	PF04997.12	3.8e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000028040	-	4095	-	ENSSDUP00000027556	1364 (aa)	-	-
ENSSDUT00000027986	-	5597	XM_022743518	ENSSDUP00000027502	1390 (aa)	XP_022599239	UPI000BBE4F50

Gene Model

Click here to download ENSSDUG00000019840's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03020	RNA polymerase	KEGG
sdu04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000019840's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000019840	polr3a	63	44.118	ENSSDUG00000014631	polr1a	55	45.000
ENSSDUG00000019840	polr3a	91	38.479	ENSSDUG00000020466	polr2a	68	38.479

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000019840	polr3a	100	90.288	ENSG00000148606	POLR3A	98	92.405	Homo_sapiens
ENSSDUG00000019840	polr3a	62	93.728	ENSAPOG00000022727	polr3a	99	93.728	Acanthochromis_polyacanthus
ENSSDUG00000019840	polr3a	100	90.165	ENSAMEG00000017801	POLR3A	100	90.165	Ailuropoda_melanoleuca
ENSSDUG00000019840	polr3a	94	97.692	ENSACIG00000024504	polr3a	97	97.692	Amphilophus_citrinellus
ENSSDUG00000019840	polr3a	100	94.101	ENSAOCG00000003949	-	100	94.101	Amphiprion_ocellaris
ENSSDUG00000019840	polr3a	100	97.482	ENSAOCG00000002071	polr3a	100	97.482	Amphiprion_ocellaris
ENSSDUG00000019840	polr3a	100	97.266	ENSAPEG00000001966	-	100	97.266	Amphiprion_percula
ENSSDUG00000019840	polr3a	100	97.482	ENSAPEG00000013351	polr3a	100	97.482	Amphiprion_percula
ENSSDUG00000019840	polr3a	100	97.338	ENSATEG00000023277	polr3a	100	97.338	Anabas_testudineus
ENSSDUG00000019840	polr3a	99	90.836	ENSAPLG00000015878	POLR3A	99	90.836	Anas_platyrhynchos
ENSSDUG00000019840	polr3a	93	89.687	ENSACAG00000007985	POLR3A	99	89.687	Anolis_carolinensis
ENSSDUG00000019840	polr3a	100	87.716	ENSANAG00000028922	POLR3A	96	92.994	Aotus_nancymaae
ENSSDUG00000019840	polr3a	100	96.691	ENSACLG00000005914	polr3a	100	96.691	Astatotilapia_calliptera
ENSSDUG00000019840	polr3a	100	89.784	ENSAMXG00000018852	polr3a	100	89.784	Astyanax_mexicanus
ENSSDUG00000019840	polr3a	100	90.360	ENSBTAG00000013259	POLR3A	100	90.360	Bos_taurus
ENSSDUG00000019840	polr3a	98	56.999	WBGene00004411	rpc-1	99	56.999	Caenorhabditis_elegans
ENSSDUG00000019840	polr3a	100	90.072	ENSCJAG00000001015	POLR3A	100	90.072	Callithrix_jacchus
ENSSDUG00000019840	polr3a	100	90.432	ENSCAFG00000015546	POLR3A	100	90.432	Canis_familiaris
ENSSDUG00000019840	polr3a	100	90.432	ENSCAFG00020014711	POLR3A	100	90.432	Canis_lupus_dingo
ENSSDUG00000019840	polr3a	100	90.000	ENSCHIG00000000352	POLR3A	100	90.000	Capra_hircus
ENSSDUG00000019840	polr3a	100	89.784	ENSTSYG00000006671	POLR3A	100	89.784	Carlito_syrichta
ENSSDUG00000019840	polr3a	99	89.818	ENSCAPG00000016031	POLR3A	100	89.818	Cavia_aperea
ENSSDUG00000019840	polr3a	100	89.856	ENSCPOG00000022387	POLR3A	100	89.856	Cavia_porcellus
ENSSDUG00000019840	polr3a	100	88.633	ENSCCAG00000032995	POLR3A	100	88.633	Cebus_capucinus
ENSSDUG00000019840	polr3a	100	90.288	ENSCATG00000035842	POLR3A	98	92.405	Cercocebus_atys
ENSSDUG00000019840	polr3a	100	90.072	ENSCLAG00000009629	POLR3A	100	90.072	Chinchilla_lanigera
ENSSDUG00000019840	polr3a	100	90.288	ENSCSAG00000009292	POLR3A	100	90.288	Chlorocebus_sabaeus
ENSSDUG00000019840	polr3a	81	81.818	ENSCHOG00000008368	POLR3A	95	81.818	Choloepus_hoffmanni
ENSSDUG00000019840	polr3a	99	90.857	ENSCPBG00000002079	POLR3A	99	90.857	Chrysemys_picta_bellii
ENSSDUG00000019840	polr3a	99	68.732	ENSCSAVG00000009925	-	99	68.732	Ciona_savignyi
ENSSDUG00000019840	polr3a	86	85.944	ENSCANG00000041071	POLR3A	98	91.772	Colobus_angolensis_palliatus
ENSSDUG00000019840	polr3a	78	90.635	ENSCGRG00001015599	-	92	90.635	Cricetulus_griseus_chok1gshd
ENSSDUG00000019840	polr3a	88	89.345	ENSCGRG00000001019	Polr3a	100	89.345	Cricetulus_griseus_crigri
ENSSDUG00000019840	polr3a	100	96.835	ENSCSEG00000016653	polr3a	100	96.835	Cynoglossus_semilaevis
ENSSDUG00000019840	polr3a	100	95.899	ENSCVAG00000023049	polr3a	100	95.899	Cyprinodon_variegatus
ENSSDUG00000019840	polr3a	99	92.219	ENSDARG00000102569	polr3a	99	92.219	Danio_rerio
ENSSDUG00000019840	polr3a	100	89.568	ENSDNOG00000010194	POLR3A	100	89.568	Dasypus_novemcinctus
ENSSDUG00000019840	polr3a	100	90.216	ENSDORG00000000184	Polr3a	100	90.216	Dipodomys_ordii
ENSSDUG00000019840	polr3a	99	56.628	FBgn0030687	CG17209	99	56.628	Drosophila_melanogaster
ENSSDUG00000019840	polr3a	88	89.879	ENSETEG00000007477	POLR3A	89	89.879	Echinops_telfairi
ENSSDUG00000019840	polr3a	59	75.995	ENSEBUG00000013761	polr3a	98	75.995	Eptatretus_burgeri
ENSSDUG00000019840	polr3a	100	90.288	ENSEASG00005023053	POLR3A	100	90.288	Equus_asinus_asinus
ENSSDUG00000019840	polr3a	97	90.387	ENSECAG00000019416	POLR3A	100	90.109	Equus_caballus
ENSSDUG00000019840	polr3a	96	85.831	ENSEEUG00000001774	POLR3A	100	85.831	Erinaceus_europaeus
ENSSDUG00000019840	polr3a	100	91.744	ENSELUG00000014016	polr3a	100	91.744	Esox_lucius
ENSSDUG00000019840	polr3a	100	90.504	ENSFCAG00000000843	POLR3A	100	90.504	Felis_catus
ENSSDUG00000019840	polr3a	100	90.439	ENSFALG00000006913	POLR3A	100	90.439	Ficedula_albicollis
ENSSDUG00000019840	polr3a	100	90.144	ENSFDAG00000007813	POLR3A	100	90.144	Fukomys_damarensis
ENSSDUG00000019840	polr3a	95	95.921	ENSFHEG00000011922	polr3a	99	95.921	Fundulus_heteroclitus
ENSSDUG00000019840	polr3a	100	88.426	ENSGMOG00000000291	polr3a	99	88.426	Gadus_morhua
ENSSDUG00000019840	polr3a	100	90.863	ENSGALG00000004947	POLR3A	100	90.863	Gallus_gallus
ENSSDUG00000019840	polr3a	100	95.971	ENSGAFG00000005112	polr3a	100	95.971	Gambusia_affinis
ENSSDUG00000019840	polr3a	100	95.755	ENSGACG00000002304	polr3a	100	95.755	Gasterosteus_aculeatus
ENSSDUG00000019840	polr3a	95	90.689	ENSGAGG00000010386	POLR3A	98	90.689	Gopherus_agassizii
ENSSDUG00000019840	polr3a	99	89.234	ENSGGOG00000027729	POLR3A	100	91.234	Gorilla_gorilla
ENSSDUG00000019840	polr3a	100	96.691	ENSHBUG00000018098	polr3a	100	96.691	Haplochromis_burtoni
ENSSDUG00000019840	polr3a	100	90.072	ENSHGLG00000017899	POLR3A	100	90.072	Heterocephalus_glaber_female
ENSSDUG00000019840	polr3a	100	90.072	ENSHGLG00100008483	POLR3A	100	90.072	Heterocephalus_glaber_male
ENSSDUG00000019840	polr3a	100	94.964	ENSHCOG00000001075	polr3a	100	94.964	Hippocampus_comes
ENSSDUG00000019840	polr3a	100	90.288	ENSSTOG00000012983	POLR3A	100	90.288	Ictidomys_tridecemlineatus
ENSSDUG00000019840	polr3a	100	95.683	ENSKMAG00000015290	polr3a	100	95.683	Kryptolebias_marmoratus
ENSSDUG00000019840	polr3a	99	95.392	ENSLBEG00000017214	polr3a	99	95.392	Labrus_bergylta
ENSSDUG00000019840	polr3a	97	88.401	ENSLACG00000018557	POLR3A	99	88.401	Latimeria_chalumnae
ENSSDUG00000019840	polr3a	100	93.037	ENSLOCG00000004942	polr3a	100	93.037	Lepisosteus_oculatus
ENSSDUG00000019840	polr3a	100	88.857	ENSLAFG00000016719	POLR3A	100	88.857	Loxodonta_africana
ENSSDUG00000019840	polr3a	100	90.216	ENSMFAG00000032218	POLR3A	100	90.216	Macaca_fascicularis
ENSSDUG00000019840	polr3a	100	90.216	ENSMMUG00000005514	POLR3A	98	92.405	Macaca_mulatta
ENSSDUG00000019840	polr3a	99	83.917	ENSMNEG00000035163	POLR3A	99	89.858	Macaca_nemestrina
ENSSDUG00000019840	polr3a	100	86.619	ENSMLEG00000030014	POLR3A	98	92.405	Mandrillus_leucophaeus
ENSSDUG00000019840	polr3a	100	97.626	ENSMAMG00000017497	polr3a	100	97.626	Mastacembelus_armatus
ENSSDUG00000019840	polr3a	100	96.691	ENSMZEG00005000576	polr3a	100	96.691	Maylandia_zebra
ENSSDUG00000019840	polr3a	100	73.509	ENSMGAG00000005713	-	100	73.509	Meleagris_gallopavo
ENSSDUG00000019840	polr3a	100	87.986	ENSMAUG00000016247	Polr3a	100	87.986	Mesocricetus_auratus
ENSSDUG00000019840	polr3a	100	90.288	ENSMICG00000005937	POLR3A	100	91.312	Microcebus_murinus
ENSSDUG00000019840	polr3a	100	90.144	ENSMOCG00000012185	Polr3a	100	90.144	Microtus_ochrogaster
ENSSDUG00000019840	polr3a	100	96.115	ENSMMOG00000013822	polr3a	100	96.115	Mola_mola
ENSSDUG00000019840	polr3a	100	90.288	ENSMODG00000001036	POLR3A	100	90.288	Monodelphis_domestica
ENSSDUG00000019840	polr3a	100	96.763	ENSMALG00000001249	polr3a	100	96.763	Monopterus_albus
ENSSDUG00000019840	polr3a	100	90.072	MGP_CAROLIEiJ_G0019016	Polr3a	100	90.072	Mus_caroli
ENSSDUG00000019840	polr3a	100	90.144	ENSMUSG00000025280	Polr3a	100	90.144	Mus_musculus
ENSSDUG00000019840	polr3a	100	90.072	MGP_PahariEiJ_G0030029	Polr3a	100	90.072	Mus_pahari
ENSSDUG00000019840	polr3a	100	87.482	MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	Mus_spretus
ENSSDUG00000019840	polr3a	100	89.729	ENSMPUG00000003790	POLR3A	100	89.729	Mustela_putorius_furo
ENSSDUG00000019840	polr3a	100	89.209	ENSMLUG00000011522	POLR3A	100	89.209	Myotis_lucifugus
ENSSDUG00000019840	polr3a	100	88.705	ENSNGAG00000015863	Polr3a	100	88.705	Nannospalax_galili
ENSSDUG00000019840	polr3a	100	94.532	ENSNBRG00000014262	polr3a	100	94.532	Neolamprologus_brichardi
ENSSDUG00000019840	polr3a	88	83.735	ENSNLEG00000010501	POLR3A	92	83.735	Nomascus_leucogenys
ENSSDUG00000019840	polr3a	99	77.891	ENSMEUG00000012446	POLR3A	100	77.891	Notamacropus_eugenii
ENSSDUG00000019840	polr3a	100	85.540	ENSOPRG00000001880	-	100	85.540	Ochotona_princeps
ENSSDUG00000019840	polr3a	100	89.568	ENSODEG00000015146	POLR3A	100	89.568	Octodon_degus
ENSSDUG00000019840	polr3a	100	97.050	ENSONIG00000016129	polr3a	100	97.050	Oreochromis_niloticus
ENSSDUG00000019840	polr3a	98	89.701	ENSOANG00000007013	POLR3A	100	89.701	Ornithorhynchus_anatinus
ENSSDUG00000019840	polr3a	100	89.928	ENSOCUG00000012450	POLR3A	100	89.928	Oryctolagus_cuniculus
ENSSDUG00000019840	polr3a	100	95.899	ENSORLG00000008958	polr3a	100	95.899	Oryzias_latipes
ENSSDUG00000019840	polr3a	100	93.525	ENSORLG00020007525	polr3a	98	96.125	Oryzias_latipes_hni
ENSSDUG00000019840	polr3a	100	95.899	ENSORLG00015006633	polr3a	100	95.899	Oryzias_latipes_hsok
ENSSDUG00000019840	polr3a	100	95.468	ENSOMEG00000012865	polr3a	100	95.468	Oryzias_melastigma
ENSSDUG00000019840	polr3a	100	90.000	ENSOGAG00000010995	POLR3A	100	90.000	Otolemur_garnettii
ENSSDUG00000019840	polr3a	100	90.014	ENSOARG00000009656	POLR3A	100	90.014	Ovis_aries
ENSSDUG00000019840	polr3a	100	90.504	ENSPPRG00000002128	POLR3A	100	90.504	Panthera_pardus
ENSSDUG00000019840	polr3a	100	90.504	ENSPTIG00000020916	POLR3A	100	90.504	Panthera_tigris_altaica
ENSSDUG00000019840	polr3a	100	90.360	ENSPTRG00000002664	POLR3A	98	92.405	Pan_troglodytes
ENSSDUG00000019840	polr3a	100	90.216	ENSPANG00000022508	POLR3A	98	92.405	Papio_anubis
ENSSDUG00000019840	polr3a	100	93.094	ENSPKIG00000008140	polr3a	100	93.146	Paramormyrops_kingsleyae
ENSSDUG00000019840	polr3a	98	90.869	ENSPSIG00000002092	POLR3A	100	90.869	Pelodiscus_sinensis
ENSSDUG00000019840	polr3a	100	89.856	ENSPEMG00000006768	Polr3a	100	89.856	Peromyscus_maniculatus_bairdii
ENSSDUG00000019840	polr3a	100	90.288	ENSPCIG00000015842	POLR3A	100	90.288	Phascolarctos_cinereus
ENSSDUG00000019840	polr3a	54	97.450	ENSPFOG00000006458	polr3a	100	97.450	Poecilia_formosa
ENSSDUG00000019840	polr3a	100	96.331	ENSPLAG00000000997	polr3a	100	96.331	Poecilia_latipinna
ENSSDUG00000019840	polr3a	100	96.259	ENSPMEG00000006821	polr3a	100	96.259	Poecilia_mexicana
ENSSDUG00000019840	polr3a	100	96.187	ENSPREG00000002385	polr3a	100	96.187	Poecilia_reticulata
ENSSDUG00000019840	polr3a	93	90.085	ENSPPYG00000002305	POLR3A	99	90.085	Pongo_abelii
ENSSDUG00000019840	polr3a	85	79.008	ENSPCAG00000005690	POLR3A	87	79.008	Procavia_capensis
ENSSDUG00000019840	polr3a	100	90.144	ENSPCOG00000028311	POLR3A	100	90.144	Propithecus_coquereli
ENSSDUG00000019840	polr3a	100	88.921	ENSPVAG00000015553	POLR3A	100	88.921	Pteropus_vampyrus
ENSSDUG00000019840	polr3a	100	96.763	ENSPNYG00000020987	polr3a	100	96.763	Pundamilia_nyererei
ENSSDUG00000019840	polr3a	99	89.049	ENSPNAG00000006629	polr3a	99	89.049	Pygocentrus_nattereri
ENSSDUG00000019840	polr3a	100	90.000	ENSRNOG00000010008	Polr3a	100	90.000	Rattus_norvegicus
ENSSDUG00000019840	polr3a	100	86.691	ENSRBIG00000034967	POLR3A	98	92.405	Rhinopithecus_bieti
ENSSDUG00000019840	polr3a	100	90.216	ENSRROG00000025527	POLR3A	98	92.405	Rhinopithecus_roxellana
ENSSDUG00000019840	polr3a	99	50.138	YOR116C	RPO31	99	50.138	Saccharomyces_cerevisiae
ENSSDUG00000019840	polr3a	100	90.216	ENSSBOG00000022199	POLR3A	100	90.216	Saimiri_boliviensis_boliviensis
ENSSDUG00000019840	polr3a	100	90.216	ENSSHAG00000007588	POLR3A	94	90.216	Sarcophilus_harrisii
ENSSDUG00000019840	polr3a	100	93.597	ENSSFOG00015014357	polr3a	100	93.597	Scleropages_formosus
ENSSDUG00000019840	polr3a	100	97.338	ENSSMAG00000001780	polr3a	100	97.338	Scophthalmus_maximus
ENSSDUG00000019840	polr3a	100	99.856	ENSSLDG00000023908	polr3a	100	99.856	Seriola_lalandi_dorsalis
ENSSDUG00000019840	polr3a	69	90.596	ENSSARG00000009916	POLR3A	89	90.596	Sorex_araneus
ENSSDUG00000019840	polr3a	100	88.633	ENSSPUG00000013209	POLR3A	100	88.633	Sphenodon_punctatus
ENSSDUG00000019840	polr3a	100	97.626	ENSSPAG00000017712	polr3a	100	97.626	Stegastes_partitus
ENSSDUG00000019840	polr3a	100	90.288	ENSSSCG00000010327	POLR3A	100	90.288	Sus_scrofa
ENSSDUG00000019840	polr3a	100	90.576	ENSTGUG00000006423	-	100	90.576	Taeniopygia_guttata
ENSSDUG00000019840	polr3a	100	96.115	ENSTRUG00000013488	polr3a	100	96.115	Takifugu_rubripes
ENSSDUG00000019840	polr3a	100	95.977	ENSTNIG00000013151	polr3a	100	95.977	Tetraodon_nigroviridis
ENSSDUG00000019840	polr3a	71	91.489	ENSTBEG00000015288	POLR3A	75	91.489	Tupaia_belangeri
ENSSDUG00000019840	polr3a	100	84.029	ENSTTRG00000007817	POLR3A	100	84.029	Tursiops_truncatus
ENSSDUG00000019840	polr3a	100	88.058	ENSUAMG00000011283	POLR3A	100	88.058	Ursus_americanus
ENSSDUG00000019840	polr3a	100	90.360	ENSUMAG00000013913	POLR3A	100	90.360	Ursus_maritimus
ENSSDUG00000019840	polr3a	99	82.327	ENSVPAG00000003285	POLR3A	100	82.327	Vicugna_pacos
ENSSDUG00000019840	polr3a	100	90.432	ENSVVUG00000025523	POLR3A	100	90.432	Vulpes_vulpes
ENSSDUG00000019840	polr3a	86	90.643	ENSXETG00000018101	polr3a	100	90.643	Xenopus_tropicalis
ENSSDUG00000019840	polr3a	100	96.403	ENSXMAG00000015213	polr3a	100	96.403	Xiphophorus_maculatus