EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000019847 (Gene tree)
Gene ID: 111216681
Gene Symbol: gatb
Alias: pet112|pet112l|si:ch211-150a22.1|zgc:103736
Full Name: glutamyl-tRNA amidotransferase subunit B
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 18722 bases
Position: chrBDQW01000035.1:4501981-4520702
Accession: 111216681
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000027458	GatB_Yqey	PF02637.18	1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000027942	-	2472	XM_022738296	ENSSDUP00000027458	548 (aa)	XP_022594017	UPI000BBF3936
ENSSDUT00000027958	-	1339	-	ENSSDUP00000027474	172 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000019847's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu00970	Aminoacyl-tRNA biosynthesis	KEGG
sdu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000019847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000019847	gatb	92	66.929	ENSG00000059691	GATB	82	76.632	Homo_sapiens
ENSSDUG00000019847	gatb	99	90.693	ENSAPOG00000022676	gatb	99	90.693	Acanthochromis_polyacanthus
ENSSDUG00000019847	gatb	94	63.757	ENSAMEG00000018434	GATB	94	63.757	Ailuropoda_melanoleuca
ENSSDUG00000019847	gatb	79	90.596	ENSACIG00000015827	gatb	99	90.596	Amphilophus_citrinellus
ENSSDUG00000019847	gatb	91	91.784	ENSAOCG00000009635	gatb	96	91.784	Amphiprion_ocellaris
ENSSDUG00000019847	gatb	91	86.172	ENSAPEG00000023666	gatb	94	86.172	Amphiprion_percula
ENSSDUG00000019847	gatb	99	90.693	ENSATEG00000011821	gatb	99	90.693	Anabas_testudineus
ENSSDUG00000019847	gatb	90	70.122	ENSAPLG00000003933	GATB	99	70.122	Anas_platyrhynchos
ENSSDUG00000019847	gatb	91	67.068	ENSACAG00000002772	GATB	91	67.068	Anolis_carolinensis
ENSSDUG00000019847	gatb	94	64.627	ENSANAG00000020953	GATB	94	64.627	Aotus_nancymaae
ENSSDUG00000019847	gatb	81	91.091	ENSACLG00000026091	gatb	91	91.091	Astatotilapia_calliptera
ENSSDUG00000019847	gatb	90	70.683	ENSAMXG00000021662	gatb	89	70.683	Astyanax_mexicanus
ENSSDUG00000019847	gatb	92	65.878	ENSBTAG00000013914	GATB	91	65.878	Bos_taurus
ENSSDUG00000019847	gatb	94	65.010	ENSCJAG00000002147	GATB	94	65.010	Callithrix_jacchus
ENSSDUG00000019847	gatb	89	67.617	ENSCAFG00000008088	GATB	88	67.617	Canis_familiaris
ENSSDUG00000019847	gatb	89	67.617	ENSCAFG00020026686	GATB	84	72.549	Canis_lupus_dingo
ENSSDUG00000019847	gatb	91	65.339	ENSCHIG00000020111	GATB	90	65.339	Capra_hircus
ENSSDUG00000019847	gatb	94	66.730	ENSTSYG00000009976	GATB	94	66.730	Carlito_syrichta
ENSSDUG00000019847	gatb	96	55.766	ENSCAPG00000010977	GATB	97	55.766	Cavia_aperea
ENSSDUG00000019847	gatb	96	62.107	ENSCPOG00000005023	GATB	97	62.107	Cavia_porcellus
ENSSDUG00000019847	gatb	77	71.529	ENSCCAG00000021445	GATB	85	71.529	Cebus_capucinus
ENSSDUG00000019847	gatb	94	65.010	ENSCATG00000034281	GATB	94	65.010	Cercocebus_atys
ENSSDUG00000019847	gatb	93	64.683	ENSCLAG00000005772	GATB	93	69.476	Chinchilla_lanigera
ENSSDUG00000019847	gatb	94	64.818	ENSCSAG00000003318	GATB	94	64.818	Chlorocebus_sabaeus
ENSSDUG00000019847	gatb	92	65.157	ENSCHOG00000008476	GATB	91	65.157	Choloepus_hoffmanni
ENSSDUG00000019847	gatb	96	65.082	ENSCPBG00000025824	GATB	98	65.082	Chrysemys_picta_bellii
ENSSDUG00000019847	gatb	94	65.010	ENSCANG00000029227	GATB	94	65.010	Colobus_angolensis_palliatus
ENSSDUG00000019847	gatb	91	66.733	ENSCGRG00001024051	GATB	88	70.813	Cricetulus_griseus_chok1gshd
ENSSDUG00000019847	gatb	91	66.733	ENSCGRG00000012974	GATB	88	70.813	Cricetulus_griseus_crigri
ENSSDUG00000019847	gatb	99	81.569	ENSCSEG00000004009	gatb	99	83.257	Cynoglossus_semilaevis
ENSSDUG00000019847	gatb	91	87.324	ENSCVAG00000017180	gatb	99	87.324	Cyprinodon_variegatus
ENSSDUG00000019847	gatb	99	70.054	ENSDARG00000037309	gatb	99	70.054	Danio_rerio
ENSSDUG00000019847	gatb	91	66.270	ENSDNOG00000012683	GATB	90	66.270	Dasypus_novemcinctus
ENSSDUG00000019847	gatb	95	63.480	ENSDORG00000010241	Gatb	94	63.480	Dipodomys_ordii
ENSSDUG00000019847	gatb	93	44.055	FBgn0039153	GatB	97	44.055	Drosophila_melanogaster
ENSSDUG00000019847	gatb	89	48.980	ENSETEG00000002356	GATB	88	48.980	Echinops_telfairi
ENSSDUG00000019847	gatb	94	65.774	ENSEASG00005015868	GATB	94	65.774	Equus_asinus_asinus
ENSSDUG00000019847	gatb	94	64.436	ENSECAG00000003539	GATB	94	64.436	Equus_caballus
ENSSDUG00000019847	gatb	79	61.560	ENSEEUG00000002311	GATB	79	61.560	Erinaceus_europaeus
ENSSDUG00000019847	gatb	99	76.311	ENSELUG00000013584	gatb	99	77.583	Esox_lucius
ENSSDUG00000019847	gatb	94	64.245	ENSFCAG00000003207	GATB	94	64.245	Felis_catus
ENSSDUG00000019847	gatb	81	67.040	ENSFALG00000002209	GATB	99	67.040	Ficedula_albicollis
ENSSDUG00000019847	gatb	91	65.669	ENSFDAG00000006426	GATB	88	70.574	Fukomys_damarensis
ENSSDUG00000019847	gatb	99	83.607	ENSFHEG00000008643	GATB	99	83.607	Fundulus_heteroclitus
ENSSDUG00000019847	gatb	89	78.615	ENSGMOG00000001575	gatb	99	78.615	Gadus_morhua
ENSSDUG00000019847	gatb	95	66.603	ENSGALG00000010097	GATB	96	66.603	Gallus_gallus
ENSSDUG00000019847	gatb	99	81.056	ENSGAFG00000014422	gatb	99	81.056	Gambusia_affinis
ENSSDUG00000019847	gatb	90	85.976	ENSGACG00000017143	gatb	100	85.976	Gasterosteus_aculeatus
ENSSDUG00000019847	gatb	95	65.027	ENSGAGG00000007826	GATB	99	65.027	Gopherus_agassizii
ENSSDUG00000019847	gatb	94	65.583	ENSGGOG00000011099	GATB	94	65.583	Gorilla_gorilla
ENSSDUG00000019847	gatb	98	88.704	ENSHBUG00000009656	gatb	98	88.704	Haplochromis_burtoni
ENSSDUG00000019847	gatb	92	65.680	ENSHGLG00000001316	GATB	89	70.892	Heterocephalus_glaber_female
ENSSDUG00000019847	gatb	92	65.680	ENSHGLG00100004289	GATB	89	70.991	Heterocephalus_glaber_male
ENSSDUG00000019847	gatb	99	74.954	ENSHCOG00000006270	gatb	98	74.954	Hippocampus_comes
ENSSDUG00000019847	gatb	99	68.909	ENSIPUG00000013560	gatb	99	68.909	Ictalurus_punctatus
ENSSDUG00000019847	gatb	92	67.126	ENSSTOG00000005689	GATB	92	66.667	Ictidomys_tridecemlineatus
ENSSDUG00000019847	gatb	89	66.735	ENSJJAG00000016979	Gatb	86	71.921	Jaculus_jaculus
ENSSDUG00000019847	gatb	99	84.124	ENSKMAG00000004727	gatb	99	84.124	Kryptolebias_marmoratus
ENSSDUG00000019847	gatb	99	89.234	ENSLBEG00000019511	gatb	99	89.234	Labrus_bergylta
ENSSDUG00000019847	gatb	90	64.257	ENSLACG00000004352	GATB	96	64.257	Latimeria_chalumnae
ENSSDUG00000019847	gatb	99	61.580	ENSLOCG00000008564	gatb	99	61.580	Lepisosteus_oculatus
ENSSDUG00000019847	gatb	91	66.932	ENSLAFG00000022607	GATB	90	66.932	Loxodonta_africana
ENSSDUG00000019847	gatb	91	66.534	ENSMMUG00000011048	GATB	90	66.534	Macaca_mulatta
ENSSDUG00000019847	gatb	91	66.335	ENSMNEG00000040147	GATB	90	66.335	Macaca_nemestrina
ENSSDUG00000019847	gatb	94	65.201	ENSMLEG00000042135	GATB	94	65.201	Mandrillus_leucophaeus
ENSSDUG00000019847	gatb	99	87.956	ENSMAMG00000013256	gatb	99	87.956	Mastacembelus_armatus
ENSSDUG00000019847	gatb	99	88.504	ENSMZEG00005008495	gatb	99	88.504	Maylandia_zebra
ENSSDUG00000019847	gatb	89	69.857	ENSMGAG00000004276	GATB	97	69.857	Meleagris_gallopavo
ENSSDUG00000019847	gatb	91	67.131	ENSMAUG00000019099	Gatb	88	70.983	Mesocricetus_auratus
ENSSDUG00000019847	gatb	92	66.339	ENSMICG00000004311	GATB	90	66.339	Microcebus_murinus
ENSSDUG00000019847	gatb	94	64.436	ENSMOCG00000017566	Gatb	93	68.337	Microtus_ochrogaster
ENSSDUG00000019847	gatb	91	71.831	ENSMMOG00000005376	gatb	87	71.831	Mola_mola
ENSSDUG00000019847	gatb	94	67.636	ENSMODG00000001031	GATB	93	67.636	Monodelphis_domestica
ENSSDUG00000019847	gatb	98	87.407	ENSMALG00000003418	gatb	99	87.819	Monopterus_albus
ENSSDUG00000019847	gatb	91	65.538	MGP_CAROLIEiJ_G0025120	Gatb	89	69.928	Mus_caroli
ENSSDUG00000019847	gatb	91	65.538	ENSMUSG00000028085	Gatb	88	70.024	Mus_musculus
ENSSDUG00000019847	gatb	91	65.936	MGP_PahariEiJ_G0026563	Gatb	88	70.504	Mus_pahari
ENSSDUG00000019847	gatb	91	65.538	MGP_SPRETEiJ_G0026062	Gatb	90	65.538	Mus_spretus
ENSSDUG00000019847	gatb	94	64.313	ENSMPUG00000007394	GATB	94	64.313	Mustela_putorius_furo
ENSSDUG00000019847	gatb	91	66.534	ENSMLUG00000008194	GATB	90	66.534	Myotis_lucifugus
ENSSDUG00000019847	gatb	92	66.075	ENSNGAG00000002152	Gatb	90	70.686	Nannospalax_galili
ENSSDUG00000019847	gatb	79	91.096	ENSNBRG00000005947	gatb	99	91.096	Neolamprologus_brichardi
ENSSDUG00000019847	gatb	94	65.392	ENSNLEG00000005836	GATB	94	65.392	Nomascus_leucogenys
ENSSDUG00000019847	gatb	90	67.273	ENSMEUG00000001479	GATB	99	67.273	Notamacropus_eugenii
ENSSDUG00000019847	gatb	95	65.774	ENSOPRG00000011496	GATB	94	65.774	Ochotona_princeps
ENSSDUG00000019847	gatb	93	63.532	ENSODEG00000005429	GATB	93	68.337	Octodon_degus
ENSSDUG00000019847	gatb	99	88.321	ENSONIG00000010059	gatb	99	88.321	Oreochromis_niloticus
ENSSDUG00000019847	gatb	80	66.133	ENSOANG00000005282	GATB	100	66.133	Ornithorhynchus_anatinus
ENSSDUG00000019847	gatb	93	66.602	ENSOCUG00000016875	GATB	92	66.602	Oryctolagus_cuniculus
ENSSDUG00000019847	gatb	90	84.444	ENSORLG00000007740	gatb	100	84.444	Oryzias_latipes
ENSSDUG00000019847	gatb	99	82.299	ENSORLG00020016385	gatb	99	82.299	Oryzias_latipes_hni
ENSSDUG00000019847	gatb	99	82.299	ENSOMEG00000003089	gatb	99	82.299	Oryzias_melastigma
ENSSDUG00000019847	gatb	96	62.963	ENSOGAG00000014181	GATB	97	62.963	Otolemur_garnettii
ENSSDUG00000019847	gatb	91	64.950	ENSOARG00000004355	GATB	90	64.950	Ovis_aries
ENSSDUG00000019847	gatb	94	65.774	ENSPPAG00000041690	GATB	94	65.774	Pan_paniscus
ENSSDUG00000019847	gatb	91	65.737	ENSPPRG00000004993	GATB	90	65.737	Panthera_pardus
ENSSDUG00000019847	gatb	91	65.737	ENSPTIG00000021433	GATB	90	65.737	Panthera_tigris_altaica
ENSSDUG00000019847	gatb	94	62.906	ENSPTRG00000016513	GATB	94	62.906	Pan_troglodytes
ENSSDUG00000019847	gatb	94	62.524	ENSPANG00000024036	GATB	94	62.524	Papio_anubis
ENSSDUG00000019847	gatb	99	68.829	ENSPKIG00000017076	gatb	96	74.597	Paramormyrops_kingsleyae
ENSSDUG00000019847	gatb	93	66.667	ENSPSIG00000017832	GATB	93	66.667	Pelodiscus_sinensis
ENSSDUG00000019847	gatb	91	72.636	ENSPMGG00000016497	gatb	89	72.545	Periophthalmus_magnuspinnatus
ENSSDUG00000019847	gatb	91	66.335	ENSPEMG00000011096	Gatb	88	70.813	Peromyscus_maniculatus_bairdii
ENSSDUG00000019847	gatb	94	67.248	ENSPCIG00000015213	GATB	95	66.858	Phascolarctos_cinereus
ENSSDUG00000019847	gatb	99	80.978	ENSPFOG00000009933	gatb	99	80.978	Poecilia_formosa
ENSSDUG00000019847	gatb	99	81.239	ENSPLAG00000015569	gatb	99	81.239	Poecilia_latipinna
ENSSDUG00000019847	gatb	99	81.239	ENSPMEG00000006100	gatb	99	81.239	Poecilia_mexicana
ENSSDUG00000019847	gatb	99	81.056	ENSPREG00000000128	gatb	99	81.056	Poecilia_reticulata
ENSSDUG00000019847	gatb	94	65.774	ENSPPYG00000015121	GATB	94	65.774	Pongo_abelii
ENSSDUG00000019847	gatb	91	53.293	ENSPCAG00000005950	GATB	90	53.293	Procavia_capensis
ENSSDUG00000019847	gatb	92	66.535	ENSPCOG00000021777	GATB	92	66.535	Propithecus_coquereli
ENSSDUG00000019847	gatb	91	65.538	ENSPVAG00000006891	GATB	90	65.538	Pteropus_vampyrus
ENSSDUG00000019847	gatb	99	88.504	ENSPNYG00000013884	gatb	99	88.504	Pundamilia_nyererei
ENSSDUG00000019847	gatb	99	69.495	ENSPNAG00000020150	gatb	99	69.495	Pygocentrus_nattereri
ENSSDUG00000019847	gatb	91	64.741	ENSRNOG00000037655	Gatb	90	64.741	Rattus_norvegicus
ENSSDUG00000019847	gatb	94	65.010	ENSRBIG00000006453	GATB	94	65.010	Rhinopithecus_bieti
ENSSDUG00000019847	gatb	94	65.010	ENSRROG00000041575	GATB	94	65.010	Rhinopithecus_roxellana
ENSSDUG00000019847	gatb	86	31.434	YBL080C	-	91	31.434	Saccharomyces_cerevisiae
ENSSDUG00000019847	gatb	95	64.419	ENSSBOG00000022495	GATB	96	64.419	Saimiri_boliviensis_boliviensis
ENSSDUG00000019847	gatb	93	66.863	ENSSHAG00000011763	GATB	93	66.863	Sarcophilus_harrisii
ENSSDUG00000019847	gatb	99	71.038	ENSSFOG00015015565	gatb	98	71.038	Scleropages_formosus
ENSSDUG00000019847	gatb	99	90.693	ENSSMAG00000003609	gatb	76	90.693	Scophthalmus_maximus
ENSSDUG00000019847	gatb	91	98.196	ENSSLDG00000010253	gatb	96	98.196	Seriola_lalandi_dorsalis
ENSSDUG00000019847	gatb	65	64.964	ENSSARG00000003212	GATB	64	64.964	Sorex_araneus
ENSSDUG00000019847	gatb	90	67.611	ENSSPUG00000014453	GATB	96	67.611	Sphenodon_punctatus
ENSSDUG00000019847	gatb	91	92.786	ENSSPAG00000014465	gatb	99	92.786	Stegastes_partitus
ENSSDUG00000019847	gatb	91	65.339	ENSSSCG00000009015	GATB	99	64.368	Sus_scrofa
ENSSDUG00000019847	gatb	90	69.715	ENSTGUG00000004986	GATB	99	69.715	Taeniopygia_guttata
ENSSDUG00000019847	gatb	98	72.744	ENSTRUG00000015238	gatb	99	72.744	Takifugu_rubripes
ENSSDUG00000019847	gatb	74	83.578	ENSTNIG00000003378	gatb	99	83.578	Tetraodon_nigroviridis
ENSSDUG00000019847	gatb	77	51.179	ENSTBEG00000009804	GATB	86	51.179	Tupaia_belangeri
ENSSDUG00000019847	gatb	91	65.737	ENSTTRG00000010679	GATB	90	65.737	Tursiops_truncatus
ENSSDUG00000019847	gatb	94	64.504	ENSUAMG00000021441	GATB	94	64.504	Ursus_americanus
ENSSDUG00000019847	gatb	94	64.504	ENSUMAG00000016157	GATB	94	64.504	Ursus_maritimus
ENSSDUG00000019847	gatb	70	77.091	ENSVPAG00000010844	GATB	69	77.091	Vicugna_pacos
ENSSDUG00000019847	gatb	90	67.071	ENSVVUG00000025083	GATB	89	67.071	Vulpes_vulpes
ENSSDUG00000019847	gatb	89	68.916	ENSXETG00000034167	GATB	98	69.231	Xenopus_tropicalis
ENSSDUG00000019847	gatb	99	81.421	ENSXMAG00000008071	gatb	99	81.421	Xiphophorus_maculatus