EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000020002 (Gene tree)
Gene ID: 111217074
Gene Symbol: htatsf1
Alias: zgc:66252
Full Name: HIV Tat-specific factor 1-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3823 bases
Position: chrBDQW01000040.1:4369327-4373149
Accession: 111217074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000027660	RRM_1	PF00076.22	1.9e-14	1	1
ENSSDUP00000027652	RRM_1	PF00076.22	3.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000028137	-	1720	XM_022738771	ENSSDUP00000027652	498 (aa)	XP_022594492	-
ENSSDUT00000028145	-	1543	-	ENSSDUP00000027660	420 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000020002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020002's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020002	htatsf1	87	62.005	ENSG00000102241	HTATSF1	100	55.870	Homo_sapiens
ENSSDUG00000020002	htatsf1	99	80.310	ENSAPOG00000009823	htatsf1	100	79.646	Acanthochromis_polyacanthus
ENSSDUG00000020002	htatsf1	99	76.805	ENSACIG00000020459	htatsf1	100	79.646	Amphilophus_citrinellus
ENSSDUG00000020002	htatsf1	99	79.521	ENSAOCG00000020994	htatsf1	100	79.521	Amphiprion_ocellaris
ENSSDUG00000020002	htatsf1	99	79.605	ENSAPEG00000016432	htatsf1	100	79.605	Amphiprion_percula
ENSSDUG00000020002	htatsf1	99	76.552	ENSATEG00000008903	htatsf1	94	79.904	Anabas_testudineus
ENSSDUG00000020002	htatsf1	91	57.143	ENSAPLG00000012401	HTATSF1	99	58.095	Anas_platyrhynchos
ENSSDUG00000020002	htatsf1	74	65.385	ENSACAG00000009346	HTATSF1	78	65.823	Anolis_carolinensis
ENSSDUG00000020002	htatsf1	99	76.549	ENSACLG00000008096	htatsf1	100	77.434	Astatotilapia_calliptera
ENSSDUG00000020002	htatsf1	99	65.217	ENSAMXG00000008387	htatsf1	99	65.727	Astyanax_mexicanus
ENSSDUG00000020002	htatsf1	77	40.303	WBGene00022025	Y65B4A.1	72	40.000	Caenorhabditis_elegans
ENSSDUG00000020002	htatsf1	87	60.904	ENSCCAG00000025329	-	52	62.299	Cebus_capucinus
ENSSDUG00000020002	htatsf1	87	67.120	ENSCPBG00000026092	HTATSF1	98	59.649	Chrysemys_picta_bellii
ENSSDUG00000020002	htatsf1	80	56.250	ENSCING00000005914	-	81	43.478	Ciona_intestinalis
ENSSDUG00000020002	htatsf1	88	39.583	ENSCSAVG00000000371	-	92	37.757	Ciona_savignyi
ENSSDUG00000020002	htatsf1	99	77.703	ENSCVAG00000014070	htatsf1	99	78.747	Cyprinodon_variegatus
ENSSDUG00000020002	htatsf1	99	64.410	ENSDARG00000056649	htatsf1	100	63.974	Danio_rerio
ENSSDUG00000020002	htatsf1	94	42.643	FBgn0037081	barc	60	43.768	Drosophila_melanogaster
ENSSDUG00000020002	htatsf1	87	54.642	ENSEBUG00000001534	htatsf1	77	55.118	Eptatretus_burgeri
ENSSDUG00000020002	htatsf1	99	60.776	ENSELUG00000005486	htatsf1	90	63.011	Esox_lucius
ENSSDUG00000020002	htatsf1	87	63.073	ENSFALG00000003728	HTATSF1	80	63.733	Ficedula_albicollis
ENSSDUG00000020002	htatsf1	99	76.889	ENSFHEG00000020286	htatsf1	100	76.053	Fundulus_heteroclitus
ENSSDUG00000020002	htatsf1	87	77.473	ENSGMOG00000016444	htatsf1	100	77.473	Gadus_morhua
ENSSDUG00000020002	htatsf1	87	64.402	ENSGALG00000006410	HTATSF1	80	64.785	Gallus_gallus
ENSSDUG00000020002	htatsf1	99	75.615	ENSGAFG00000003041	htatsf1	99	75.664	Gambusia_affinis
ENSSDUG00000020002	htatsf1	99	75.947	ENSGACG00000020459	htatsf1	100	75.501	Gasterosteus_aculeatus
ENSSDUG00000020002	htatsf1	99	76.549	ENSHBUG00000004392	htatsf1	100	77.434	Haplochromis_burtoni
ENSSDUG00000020002	htatsf1	99	67.661	ENSHCOG00000009056	htatsf1	99	68.409	Hippocampus_comes
ENSSDUG00000020002	htatsf1	88	74.255	ENSIPUG00000017828	htatsf1	77	74.255	Ictalurus_punctatus
ENSSDUG00000020002	htatsf1	99	76.615	ENSKMAG00000007622	htatsf1	100	77.283	Kryptolebias_marmoratus
ENSSDUG00000020002	htatsf1	99	78.070	ENSLBEG00000001154	htatsf1	100	77.632	Labrus_bergylta
ENSSDUG00000020002	htatsf1	99	58.797	ENSLACG00000015989	HTATSF1	99	58.352	Latimeria_chalumnae
ENSSDUG00000020002	htatsf1	87	47.326	ENSLOCG00000015118	htatsf1	99	42.767	Lepisosteus_oculatus
ENSSDUG00000020002	htatsf1	87	62.963	ENSLAFG00000014307	HTATSF1	53	60.733	Loxodonta_africana
ENSSDUG00000020002	htatsf1	87	61.741	ENSMNEG00000024084	HTATSF1	53	61.880	Macaca_nemestrina
ENSSDUG00000020002	htatsf1	99	81.136	ENSMAMG00000021225	htatsf1	99	81.818	Mastacembelus_armatus
ENSSDUG00000020002	htatsf1	99	76.770	ENSMZEG00005000485	htatsf1	100	77.655	Maylandia_zebra
ENSSDUG00000020002	htatsf1	80	66.864	ENSMGAG00000003558	HTATSF1	77	67.251	Meleagris_gallopavo
ENSSDUG00000020002	htatsf1	99	77.902	ENSMMOG00000011013	htatsf1	100	78.427	Mola_mola
ENSSDUG00000020002	htatsf1	87	65.854	ENSMODG00000014087	-	79	65.952	Monodelphis_domestica
ENSSDUG00000020002	htatsf1	61	58.427	ENSMODG00000000199	-	92	56.098	Monodelphis_domestica
ENSSDUG00000020002	htatsf1	99	78.396	ENSMALG00000019977	htatsf1	100	78.396	Monopterus_albus
ENSSDUG00000020002	htatsf1	99	76.549	ENSNBRG00000003818	htatsf1	100	77.434	Neolamprologus_brichardi
ENSSDUG00000020002	htatsf1	87	64.706	ENSMEUG00000004133	-	87	64.815	Notamacropus_eugenii
ENSSDUG00000020002	htatsf1	99	76.991	ENSONIG00000008638	htatsf1	100	77.876	Oreochromis_niloticus
ENSSDUG00000020002	htatsf1	90	56.699	ENSOANG00000011674	-	77	66.265	Ornithorhynchus_anatinus
ENSSDUG00000020002	htatsf1	99	73.789	ENSORLG00000002356	htatsf1	100	73.128	Oryzias_latipes
ENSSDUG00000020002	htatsf1	99	73.465	ENSORLG00020017818	htatsf1	98	73.102	Oryzias_latipes_hni
ENSSDUG00000020002	htatsf1	99	74.115	ENSORLG00015002268	htatsf1	100	74.115	Oryzias_latipes_hsok
ENSSDUG00000020002	htatsf1	99	75.497	ENSOMEG00000007564	htatsf1	100	75.497	Oryzias_melastigma
ENSSDUG00000020002	htatsf1	99	62.939	ENSPKIG00000024852	htatsf1	99	62.500	Paramormyrops_kingsleyae
ENSSDUG00000020002	htatsf1	58	77.642	ENSPSIG00000010192	HTATSF1	95	64.286	Pelodiscus_sinensis
ENSSDUG00000020002	htatsf1	99	72.000	ENSPMGG00000006172	htatsf1	99	72.222	Periophthalmus_magnuspinnatus
ENSSDUG00000020002	htatsf1	87	61.247	ENSPCIG00000018896	-	81	61.394	Phascolarctos_cinereus
ENSSDUG00000020002	htatsf1	87	63.684	ENSPCIG00000030173	-	84	63.802	Phascolarctos_cinereus
ENSSDUG00000020002	htatsf1	99	77.405	ENSPFOG00000007871	htatsf1	98	77.212	Poecilia_formosa
ENSSDUG00000020002	htatsf1	99	77.852	ENSPLAG00000007532	htatsf1	100	77.852	Poecilia_latipinna
ENSSDUG00000020002	htatsf1	99	77.181	ENSPMEG00000000352	htatsf1	100	77.405	Poecilia_mexicana
ENSSDUG00000020002	htatsf1	99	77.405	ENSPREG00000007811	htatsf1	100	77.629	Poecilia_reticulata
ENSSDUG00000020002	htatsf1	87	54.424	ENSPCAG00000010576	HTATSF1	50	54.737	Procavia_capensis
ENSSDUG00000020002	htatsf1	87	60.322	ENSPVAG00000010281	HTATSF1	52	60.743	Pteropus_vampyrus
ENSSDUG00000020002	htatsf1	99	76.549	ENSPNYG00000016693	htatsf1	100	77.434	Pundamilia_nyererei
ENSSDUG00000020002	htatsf1	99	65.385	ENSPNAG00000006166	htatsf1	99	66.739	Pygocentrus_nattereri
ENSSDUG00000020002	htatsf1	51	31.278	YNL286W	-	78	31.278	Saccharomyces_cerevisiae
ENSSDUG00000020002	htatsf1	85	63.978	ENSSHAG00000018908	-	79	64.096	Sarcophilus_harrisii
ENSSDUG00000020002	htatsf1	87	64.324	ENSSHAG00000006440	-	93	64.973	Sarcophilus_harrisii
ENSSDUG00000020002	htatsf1	87	68.207	ENSSFOG00015012002	htatsf1	99	59.197	Scleropages_formosus
ENSSDUG00000020002	htatsf1	99	77.293	ENSSMAG00000002970	htatsf1	100	76.419	Scophthalmus_maximus
ENSSDUG00000020002	htatsf1	99	92.428	ENSSLDG00000016880	htatsf1	100	92.428	Seriola_lalandi_dorsalis
ENSSDUG00000020002	htatsf1	99	55.870	ENSSPUG00000014767	HTATSF1	99	56.957	Sphenodon_punctatus
ENSSDUG00000020002	htatsf1	99	80.879	ENSSPAG00000000732	htatsf1	100	81.538	Stegastes_partitus
ENSSDUG00000020002	htatsf1	87	63.032	ENSSSCG00000023062	HTATSF1	52	63.061	Sus_scrofa
ENSSDUG00000020002	htatsf1	98	55.408	ENSTGUG00000002099	HTATSF1	98	56.291	Taeniopygia_guttata
ENSSDUG00000020002	htatsf1	99	74.943	ENSTRUG00000013383	htatsf1	100	75.171	Takifugu_rubripes
ENSSDUG00000020002	htatsf1	99	75.799	ENSTNIG00000016140	htatsf1	99	76.027	Tetraodon_nigroviridis
ENSSDUG00000020002	htatsf1	83	62.222	ENSTTRG00000002269	HTATSF1	58	62.222	Tursiops_truncatus
ENSSDUG00000020002	htatsf1	87	65.041	ENSXETG00000019749	htatsf1	75	62.189	Xenopus_tropicalis
ENSSDUG00000020002	htatsf1	96	76.047	ENSXCOG00000006912	htatsf1	100	71.762	Xiphophorus_couchianus
ENSSDUG00000020002	htatsf1	99	76.957	ENSXMAG00000000490	htatsf1	100	77.181	Xiphophorus_maculatus