EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000020042 (Gene tree)
Gene ID: 111224106
Gene Symbol: -
Alias: -
Full Name: EH domain-containing protein 2-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 8918 bases
Position: chrBDQW01000122.1:195955-204872
Accession: 111224106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000027853	MMR_HSR1	PF01926.23	3.4e-06	1	1
ENSSDUP00000027781	MMR_HSR1	PF01926.23	3.4e-06	1	1
ENSSDUP00000027808	MMR_HSR1	PF01926.23	3.6e-06	1	1
ENSSDUP00000027754	MMR_HSR1	PF01926.23	3.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000028240	-	1644	-	ENSSDUP00000027754	547 (aa)	-	-
ENSSDUT00000028299	-	1659	-	ENSSDUP00000027808	552 (aa)	-	-
ENSSDUT00000028344	-	1626	XM_022748504	ENSSDUP00000027853	541 (aa)	XP_022604225	-
ENSSDUT00000028268	-	1608	-	ENSSDUP00000027781	535 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000020042's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020042's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000020042	-	99	60.259	ENSSDUG00000010820	ehd3	99	60.259
ENSSDUG00000020042	-	97	60.769	ENSSDUG00000010947	ehd4	95	60.878
ENSSDUG00000020042	-	98	60.788	ENSSDUG00000016436	ehd1a	98	61.017
ENSSDUG00000020042	-	52	35.943	ENSSDUG00000010808	srl	54	37.959
ENSSDUG00000020042	-	52	33.681	ENSSDUG00000009161	SRL	56	35.317
ENSSDUG00000020042	-	98	73.194	ENSSDUG00000000141	ehd2b	99	72.913

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020042	-	97	67.823	ENSG00000024422	EHD2	99	66.502	Homo_sapiens
ENSSDUG00000020042	-	98	73.954	ENSAPOG00000012705	ehd2b	99	73.284	Acanthochromis_polyacanthus
ENSSDUG00000020042	-	99	95.547	ENSAPOG00000021608	-	99	95.717	Acanthochromis_polyacanthus
ENSSDUG00000020042	-	97	67.304	ENSAMEG00000015263	EHD2	97	67.300	Ailuropoda_melanoleuca
ENSSDUG00000020042	-	99	93.855	ENSACIG00000011074	-	99	94.019	Amphilophus_citrinellus
ENSSDUG00000020042	-	100	95.564	ENSAOCG00000002163	-	99	96.248	Amphiprion_ocellaris
ENSSDUG00000020042	-	98	73.764	ENSAOCG00000006422	EHD2	99	73.284	Amphiprion_ocellaris
ENSSDUG00000020042	-	98	73.764	ENSAPEG00000013956	ehd2b	99	73.284	Amphiprion_percula
ENSSDUG00000020042	-	99	95.176	ENSAPEG00000019382	-	99	95.345	Amphiprion_percula
ENSSDUG00000020042	-	99	91.776	ENSATEG00000004166	-	99	91.917	Anabas_testudineus
ENSSDUG00000020042	-	97	67.823	ENSANAG00000031077	EHD2	97	67.300	Aotus_nancymaae
ENSSDUG00000020042	-	97	72.885	ENSACLG00000021088	ehd2b	99	71.985	Astatotilapia_calliptera
ENSSDUG00000020042	-	99	91.078	ENSACLG00000005241	-	99	91.078	Astatotilapia_calliptera
ENSSDUG00000020042	-	99	67.598	ENSAMXG00000013748	ehd2a	99	67.156	Astyanax_mexicanus
ENSSDUG00000020042	-	97	68.015	ENSBTAG00000021191	EHD2	97	67.490	Bos_taurus
ENSSDUG00000020042	-	97	67.823	ENSCJAG00000011415	EHD2	97	67.300	Callithrix_jacchus
ENSSDUG00000020042	-	97	67.238	ENSCAFG00000004095	EHD2	97	67.235	Canis_familiaris
ENSSDUG00000020042	-	97	67.495	ENSCAFG00020000226	EHD2	97	67.490	Canis_lupus_dingo
ENSSDUG00000020042	-	97	68.208	ENSCHIG00000011896	EHD2	97	67.681	Capra_hircus
ENSSDUG00000020042	-	97	67.686	ENSCAPG00000007033	EHD2	97	67.681	Cavia_aperea
ENSSDUG00000020042	-	97	67.686	ENSCPOG00000026417	EHD2	97	67.681	Cavia_porcellus
ENSSDUG00000020042	-	97	67.823	ENSCCAG00000035777	EHD2	97	67.300	Cebus_capucinus
ENSSDUG00000020042	-	97	68.208	ENSCLAG00000001756	EHD2	97	67.681	Chinchilla_lanigera
ENSSDUG00000020042	-	97	67.823	ENSCSAG00000002930	EHD2	97	67.300	Chlorocebus_sabaeus
ENSSDUG00000020042	-	98	69.245	ENSCPBG00000009041	EHD2	99	68.959	Chrysemys_picta_bellii
ENSSDUG00000020042	-	97	67.823	ENSCANG00000040566	EHD2	97	67.300	Colobus_angolensis_palliatus
ENSSDUG00000020042	-	97	67.686	ENSCGRG00001018635	Ehd2	97	67.681	Cricetulus_griseus_chok1gshd
ENSSDUG00000020042	-	97	72.885	ENSCSEG00000007149	ehd2b	98	72.233	Cynoglossus_semilaevis
ENSSDUG00000020042	-	99	90.203	ENSCSEG00000001675	-	100	89.744	Cynoglossus_semilaevis
ENSSDUG00000020042	-	98	73.764	ENSCVAG00000002381	ehd2b	99	73.469	Cyprinodon_variegatus
ENSSDUG00000020042	-	99	88.312	ENSCVAG00000018998	-	99	88.312	Cyprinodon_variegatus
ENSSDUG00000020042	-	98	72.814	ENSDARG00000040362	ehd2b	99	72.171	Danio_rerio
ENSSDUG00000020042	-	99	66.667	ENSDARG00000035137	ehd2a	98	66.667	Danio_rerio
ENSSDUG00000020042	-	97	67.823	ENSDORG00000011700	Ehd2	97	67.300	Dipodomys_ordii
ENSSDUG00000020042	-	97	67.630	ENSECAG00000028265	EHD2	97	67.110	Equus_caballus
ENSSDUG00000020042	-	53	74.648	ENSEEUG00000000956	EHD2	94	74.564	Erinaceus_europaeus
ENSSDUG00000020042	-	97	77.351	ENSELUG00000019299	ehd2a	97	77.127	Esox_lucius
ENSSDUG00000020042	-	98	73.055	ENSELUG00000021876	ehd2b	99	72.593	Esox_lucius
ENSSDUG00000020042	-	97	67.304	ENSFCAG00000029117	EHD2	97	67.300	Felis_catus
ENSSDUG00000020042	-	97	68.208	ENSFDAG00000015675	EHD2	99	67.681	Fukomys_damarensis
ENSSDUG00000020042	-	98	73.954	ENSFHEG00000020637	ehd2b	99	73.655	Fundulus_heteroclitus
ENSSDUG00000020042	-	99	88.725	ENSFHEG00000002126	-	99	88.930	Fundulus_heteroclitus
ENSSDUG00000020042	-	97	73.372	ENSGMOG00000013367	ehd2b	98	73.134	Gadus_morhua
ENSSDUG00000020042	-	99	80.663	ENSGMOG00000000211	-	100	79.927	Gadus_morhua
ENSSDUG00000020042	-	98	63.925	ENSGALG00000036498	EHD2	99	63.653	Gallus_gallus
ENSSDUG00000020042	-	99	89.425	ENSGAFG00000004457	ehd2a	99	89.425	Gambusia_affinis
ENSSDUG00000020042	-	99	86.617	ENSGACG00000007320	-	100	86.239	Gasterosteus_aculeatus
ENSSDUG00000020042	-	98	72.433	ENSGACG00000013023	ehd2b	99	72.356	Gasterosteus_aculeatus
ENSSDUG00000020042	-	98	69.434	ENSGAGG00000022066	EHD2	99	69.145	Gopherus_agassizii
ENSSDUG00000020042	-	97	67.823	ENSGGOG00000002346	EHD2	97	67.300	Gorilla_gorilla
ENSSDUG00000020042	-	99	91.264	ENSHBUG00000008791	-	99	91.264	Haplochromis_burtoni
ENSSDUG00000020042	-	97	72.692	ENSHBUG00000009900	ehd2b	99	71.985	Haplochromis_burtoni
ENSSDUG00000020042	-	97	68.208	ENSHGLG00000017825	EHD2	97	67.681	Heterocephalus_glaber_female
ENSSDUG00000020042	-	97	68.208	ENSHGLG00100017344	EHD2	97	67.681	Heterocephalus_glaber_male
ENSSDUG00000020042	-	97	73.896	ENSHCOG00000017683	ehd2b	99	72.778	Hippocampus_comes
ENSSDUG00000020042	-	99	87.430	ENSHCOG00000012768	-	96	88.571	Hippocampus_comes
ENSSDUG00000020042	-	98	73.194	ENSIPUG00000000204	Ehd2	99	72.542	Ictalurus_punctatus
ENSSDUG00000020042	-	99	66.480	ENSIPUG00000024057	ehd2a	99	65.872	Ictalurus_punctatus
ENSSDUG00000020042	-	97	67.113	ENSJJAG00000008621	Ehd2	97	67.110	Jaculus_jaculus
ENSSDUG00000020042	-	98	71.863	ENSKMAG00000012447	ehd2b	99	71.614	Kryptolebias_marmoratus
ENSSDUG00000020042	-	99	90.724	ENSKMAG00000003332	-	99	90.724	Kryptolebias_marmoratus
ENSSDUG00000020042	-	98	71.561	ENSLBEG00000018343	ehd2b	99	70.962	Labrus_bergylta
ENSSDUG00000020042	-	99	94.063	ENSLBEG00000004961	-	100	93.934	Labrus_bergylta
ENSSDUG00000020042	-	81	77.108	ENSLACG00000018332	ehd2a	92	77.108	Latimeria_chalumnae
ENSSDUG00000020042	-	97	67.823	ENSMMUG00000040121	EHD2	97	67.300	Macaca_mulatta
ENSSDUG00000020042	-	99	93.878	ENSMAMG00000004890	-	100	93.566	Mastacembelus_armatus
ENSSDUG00000020042	-	97	72.692	ENSMZEG00005024162	ehd2b	99	71.985	Maylandia_zebra
ENSSDUG00000020042	-	99	90.892	ENSMZEG00005005247	-	99	90.892	Maylandia_zebra
ENSSDUG00000020042	-	97	67.495	ENSMAUG00000010317	Ehd2	97	67.490	Mesocricetus_auratus
ENSSDUG00000020042	-	97	66.284	ENSMICG00000005571	EHD2	97	65.784	Microcebus_murinus
ENSSDUG00000020042	-	97	67.495	ENSMOCG00000007010	Ehd2	97	67.490	Microtus_ochrogaster
ENSSDUG00000020042	-	99	90.299	ENSMMOG00000009001	-	99	90.299	Mola_mola
ENSSDUG00000020042	-	98	73.004	ENSMALG00000008756	ehd2b	99	72.356	Monopterus_albus
ENSSDUG00000020042	-	97	67.495	MGP_CAROLIEiJ_G0029219	Ehd2	99	81.731	Mus_caroli
ENSSDUG00000020042	-	97	67.495	ENSMUSG00000074364	Ehd2	99	81.731	Mus_musculus
ENSSDUG00000020042	-	97	67.304	MGP_PahariEiJ_G0021075	Ehd2	99	81.731	Mus_pahari
ENSSDUG00000020042	-	97	67.304	MGP_SPRETEiJ_G0030299	Ehd2	99	81.731	Mus_spretus
ENSSDUG00000020042	-	97	67.495	ENSMPUG00000004466	EHD2	97	67.490	Mustela_putorius_furo
ENSSDUG00000020042	-	97	67.495	ENSNGAG00000018699	Ehd2	97	67.490	Nannospalax_galili
ENSSDUG00000020042	-	97	92.395	ENSNBRG00000002925	ehd2a	97	92.264	Neolamprologus_brichardi
ENSSDUG00000020042	-	98	63.429	ENSMEUG00000000445	EHD2	97	63.585	Notamacropus_eugenii
ENSSDUG00000020042	-	97	68.015	ENSODEG00000006641	EHD2	97	67.490	Octodon_degus
ENSSDUG00000020042	-	97	72.885	ENSONIG00000004051	ehd2b	99	72.171	Oreochromis_niloticus
ENSSDUG00000020042	-	99	90.520	ENSONIG00000005597	-	99	90.520	Oreochromis_niloticus
ENSSDUG00000020042	-	98	73.194	ENSORLG00000002244	ehd2b	99	72.913	Oryzias_latipes
ENSSDUG00000020042	-	99	87.985	ENSORLG00000012013	-	99	88.082	Oryzias_latipes
ENSSDUG00000020042	-	98	73.004	ENSORLG00020017051	ehd2b	99	72.727	Oryzias_latipes_hni
ENSSDUG00000020042	-	99	87.800	ENSORLG00020013250	-	99	87.896	Oryzias_latipes_hni
ENSSDUG00000020042	-	99	88.170	ENSORLG00015021510	-	99	88.268	Oryzias_latipes_hsok
ENSSDUG00000020042	-	98	73.194	ENSORLG00015005729	ehd2	99	72.913	Oryzias_latipes_hsok
ENSSDUG00000020042	-	98	72.814	ENSOMEG00000001261	ehd2b	99	72.542	Oryzias_melastigma
ENSSDUG00000020042	-	99	89.464	ENSOMEG00000003975	-	99	89.572	Oryzias_melastigma
ENSSDUG00000020042	-	97	67.823	ENSOGAG00000033142	EHD2	97	67.300	Otolemur_garnettii
ENSSDUG00000020042	-	97	65.299	ENSOARG00000011391	EHD2	91	65.299	Ovis_aries
ENSSDUG00000020042	-	97	65.896	ENSPPAG00000039669	EHD2	96	65.835	Pan_paniscus
ENSSDUG00000020042	-	97	67.304	ENSPPRG00000008148	EHD2	97	67.300	Panthera_pardus
ENSSDUG00000020042	-	97	67.304	ENSPTIG00000018608	EHD2	97	67.300	Panthera_tigris_altaica
ENSSDUG00000020042	-	97	67.892	ENSPTRG00000046930	EHD2	97	67.300	Pan_troglodytes
ENSSDUG00000020042	-	97	67.892	ENSPTRG00000011214	EHD2	97	67.300	Pan_troglodytes
ENSSDUG00000020042	-	97	67.823	ENSPANG00000026345	EHD2	97	67.300	Papio_anubis
ENSSDUG00000020042	-	98	73.764	ENSPKIG00000013262	EHD2	99	73.469	Paramormyrops_kingsleyae
ENSSDUG00000020042	-	98	71.673	ENSPKIG00000016765	ehd2a	99	71.004	Paramormyrops_kingsleyae
ENSSDUG00000020042	-	99	87.199	ENSPMGG00000013285	-	100	86.949	Periophthalmus_magnuspinnatus
ENSSDUG00000020042	-	98	73.384	ENSPMGG00000015379	ehd2b	99	72.846	Periophthalmus_magnuspinnatus
ENSSDUG00000020042	-	97	66.474	ENSPCIG00000016714	EHD2	97	65.849	Phascolarctos_cinereus
ENSSDUG00000020042	-	99	89.054	ENSPFOG00000012774	-	99	89.054	Poecilia_formosa
ENSSDUG00000020042	-	98	73.004	ENSPFOG00000011756	ehd2b	99	72.542	Poecilia_formosa
ENSSDUG00000020042	-	98	73.004	ENSPLAG00000020534	ehd2b	99	72.542	Poecilia_latipinna
ENSSDUG00000020042	-	99	89.425	ENSPLAG00000000301	-	99	89.425	Poecilia_latipinna
ENSSDUG00000020042	-	98	73.004	ENSPMEG00000008030	ehd2b	99	72.542	Poecilia_mexicana
ENSSDUG00000020042	-	99	88.868	ENSPMEG00000024037	-	99	88.868	Poecilia_mexicana
ENSSDUG00000020042	-	98	72.814	ENSPREG00000016332	ehd2b	99	72.356	Poecilia_reticulata
ENSSDUG00000020042	-	99	88.868	ENSPREG00000017608	ehd2a	99	88.868	Poecilia_reticulata
ENSSDUG00000020042	-	97	67.823	ENSPPYG00000010180	EHD2	87	67.300	Pongo_abelii
ENSSDUG00000020042	-	53	74.216	ENSPCAG00000007707	EHD2	94	74.216	Procavia_capensis
ENSSDUG00000020042	-	97	67.245	ENSPCOG00000010027	EHD2	97	66.730	Propithecus_coquereli
ENSSDUG00000020042	-	97	64.818	ENSPVAG00000014670	EHD2	96	64.762	Pteropus_vampyrus
ENSSDUG00000020042	-	97	72.692	ENSPNYG00000007864	ehd2b	99	71.985	Pundamilia_nyererei
ENSSDUG00000020042	-	99	91.264	ENSPNYG00000009593	-	99	91.264	Pundamilia_nyererei
ENSSDUG00000020042	-	99	68.598	ENSPNAG00000016978	ehd2a	99	67.890	Pygocentrus_nattereri
ENSSDUG00000020042	-	98	72.932	ENSPNAG00000026764	ehd2b	99	72.294	Pygocentrus_nattereri
ENSSDUG00000020042	-	98	73.764	ENSPNAG00000026560	ehd2b	99	73.098	Pygocentrus_nattereri
ENSSDUG00000020042	-	97	67.495	ENSRNOG00000011346	Ehd2	97	67.490	Rattus_norvegicus
ENSSDUG00000020042	-	97	67.823	ENSRBIG00000035965	EHD2	97	67.300	Rhinopithecus_bieti
ENSSDUG00000020042	-	97	67.823	ENSRROG00000043148	EHD2	97	67.300	Rhinopithecus_roxellana
ENSSDUG00000020042	-	97	67.630	ENSSBOG00000025594	EHD2	97	67.110	Saimiri_boliviensis_boliviensis
ENSSDUG00000020042	-	98	73.384	ENSSFOG00015023056	ehd2	99	72.439	Scleropages_formosus
ENSSDUG00000020042	-	88	69.877	ENSSFOG00015006753	ehd2a	92	78.134	Scleropages_formosus
ENSSDUG00000020042	-	98	73.384	ENSSMAG00000020558	ehd2b	99	72.727	Scophthalmus_maximus
ENSSDUG00000020042	-	99	93.321	ENSSMAG00000020341	-	100	93.382	Scophthalmus_maximus
ENSSDUG00000020042	-	99	99.443	ENSSLDG00000008515	-	100	99.449	Seriola_lalandi_dorsalis
ENSSDUG00000020042	-	98	73.194	ENSSLDG00000005368	ehd2b	99	72.913	Seriola_lalandi_dorsalis
ENSSDUG00000020042	-	98	68.113	ENSSPUG00000004401	EHD2	99	67.844	Sphenodon_punctatus
ENSSDUG00000020042	-	99	95.918	ENSSPAG00000006737	-	99	96.089	Stegastes_partitus
ENSSDUG00000020042	-	98	73.384	ENSSPAG00000018164	ehd2b	99	73.098	Stegastes_partitus
ENSSDUG00000020042	-	97	68.208	ENSSSCG00000023371	EHD2	97	67.681	Sus_scrofa
ENSSDUG00000020042	-	98	72.433	ENSTRUG00000010128	ehd2b	99	70.879	Takifugu_rubripes
ENSSDUG00000020042	-	97	73.077	ENSTNIG00000016284	ehd2b	97	72.676	Tetraodon_nigroviridis
ENSSDUG00000020042	-	97	67.823	ENSTTRG00000011850	EHD2	97	67.300	Tursiops_truncatus
ENSSDUG00000020042	-	97	67.686	ENSUAMG00000028253	EHD2	97	67.681	Ursus_americanus
ENSSDUG00000020042	-	97	67.754	ENSVVUG00000023369	EHD2	85	67.235	Vulpes_vulpes
ENSSDUG00000020042	-	99	65.568	ENSXETG00000002783	ehd2	99	65.568	Xenopus_tropicalis
ENSSDUG00000020042	-	98	90.548	ENSXCOG00000012882	-	99	90.548	Xiphophorus_couchianus
ENSSDUG00000020042	-	98	73.194	ENSXCOG00000008602	ehd2b	99	72.575	Xiphophorus_couchianus
ENSSDUG00000020042	-	99	89.610	ENSXMAG00000010771	ehd2a	99	89.610	Xiphophorus_maculatus
ENSSDUG00000020042	-	98	73.194	ENSXMAG00000029134	ehd2b	99	72.727	Xiphophorus_maculatus