EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000020162 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 6953 bases
Position: chrBDQW01000138.1:20876477-20883429
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000027886	Transposase_22	PF02994.14	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000028377	-	690	-	ENSSDUP00000027886	229 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000020162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020162's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000020162	-	85	36.098	ENSSDUG00000004185	-	90	36.098
ENSSDUG00000020162	-	85	36.098	ENSSDUG00000023742	-	56	36.098
ENSSDUG00000020162	-	89	33.005	ENSSDUG00000008701	-	86	33.005
ENSSDUG00000020162	-	66	36.774	ENSSDUG00000010833	-	60	36.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020162	-	90	44.796	ENSAPEG00000003315	-	54	44.796	Amphiprion_percula
ENSSDUG00000020162	-	86	57.653	ENSAMXG00000036242	-	84	57.653	Astyanax_mexicanus
ENSSDUG00000020162	-	86	56.633	ENSAMXG00000038431	-	84	56.633	Astyanax_mexicanus
ENSSDUG00000020162	-	72	58.788	ENSAMXG00000038380	-	61	58.788	Astyanax_mexicanus
ENSSDUG00000020162	-	90	45.972	ENSCVAG00000020967	-	76	45.972	Cyprinodon_variegatus
ENSSDUG00000020162	-	83	41.146	ENSOMEG00000021677	-	81	41.146	Oryzias_melastigma
ENSSDUG00000020162	-	89	48.148	ENSOMEG00000000587	-	91	48.148	Oryzias_melastigma