EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000020166 (Gene tree)
Gene ID
111228443
Gene Symbol
cnot2
Alias
zgc:162316
Full Name
CCR4-NOT transcription complex subunit 2
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Plus strand
Length
10030 bases
Position
chrBDQW01000219.1:8118783-8128812
Accession
111228443
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000027911NOT2_3_5PF04153.181e-3111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000028402-5986XM_022754320ENSSDUP00000027911523 (aa)XP_022610041UPI000BBF3397
Gene Model
Click here to download ENSSDUG00000020166's gene model file
Pathways
Pathway IDPathway NameSource
sdu03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020166's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000020166cnot210079.083ENSSDUG00000013716CNOT29388.529
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000020166cnot210087.595ENSG00000111596CNOT210096.859Homo_sapiens
ENSSDUG00000020166cnot210099.235ENSAPOG00000021013cnot210099.235Acanthochromis_polyacanthus
ENSSDUG00000020166cnot27679.882ENSAPOG00000017950CNOT29679.882Acanthochromis_polyacanthus
ENSSDUG00000020166cnot210087.595ENSAMEG00000011938CNOT29686.641Ailuropoda_melanoleuca
ENSSDUG00000020166cnot27787.941ENSACIG00000007480CNOT29587.941Amphilophus_citrinellus
ENSSDUG00000020166cnot29398.554ENSACIG00000020740cnot210098.554Amphilophus_citrinellus
ENSSDUG00000020166cnot210099.426ENSAOCG00000022167cnot210099.426Amphiprion_ocellaris
ENSSDUG00000020166cnot210099.426ENSAPEG00000011343cnot210099.426Amphiprion_percula
ENSSDUG00000020166cnot210078.000ENSAPEG00000024152CNOT29688.824Amphiprion_percula
ENSSDUG00000020166cnot210099.235ENSATEG00000018641cnot210099.235Anabas_testudineus
ENSSDUG00000020166cnot210080.479ENSATEG00000023619CNOT210080.734Anabas_testudineus
ENSSDUG00000020166cnot210087.214ENSAPLG00000012657CNOT29986.260Anas_platyrhynchos
ENSSDUG00000020166cnot210088.168ENSACAG00000004779CNOT28587.214Anolis_carolinensis
ENSSDUG00000020166cnot210087.977ENSANAG00000024330CNOT29887.023Aotus_nancymaae
ENSSDUG00000020166cnot210097.897ENSACLG00000004020cnot210097.897Astatotilapia_calliptera
ENSSDUG00000020166cnot210080.639ENSACLG00000008724CNOT210080.675Astatotilapia_calliptera
ENSSDUG00000020166cnot210089.905ENSAMXG00000000972cnot210089.905Astyanax_mexicanus
ENSSDUG00000020166cnot210087.595ENSBTAG00000003748CNOT29886.641Bos_taurus
ENSSDUG00000020166cnot26040.413WBGene00003825ntl-27544.444Caenorhabditis_elegans
ENSSDUG00000020166cnot210079.389ENSCJAG00000001567CNOT29678.435Callithrix_jacchus
ENSSDUG00000020166cnot210087.595ENSCAFG00000000441CNOT29686.641Canis_familiaris
ENSSDUG00000020166cnot210087.405ENSCAFG00020016849CNOT29686.450Canis_lupus_dingo
ENSSDUG00000020166cnot210087.786ENSCHIG00000021610CNOT29886.832Capra_hircus
ENSSDUG00000020166cnot210087.405ENSTSYG00000012927CNOT29886.450Carlito_syrichta
ENSSDUG00000020166cnot210066.603ENSCAPG00000012192CNOT29565.649Cavia_aperea
ENSSDUG00000020166cnot210083.902ENSCPOG00000004756CNOT29682.955Cavia_porcellus
ENSSDUG00000020166cnot210087.595ENSCCAG00000033920CNOT29989.767Cebus_capucinus
ENSSDUG00000020166cnot210087.595ENSCATG00000036994CNOT210096.859Cercocebus_atys
ENSSDUG00000020166cnot210087.595ENSCLAG00000014354CNOT210090.330Chinchilla_lanigera
ENSSDUG00000020166cnot210087.595ENSCSAG00000004177CNOT29686.641Chlorocebus_sabaeus
ENSSDUG00000020166cnot210075.573ENSCHOG00000001283CNOT29674.618Choloepus_hoffmanni
ENSSDUG00000020166cnot210087.405ENSCPBG00000013399CNOT210086.450Chrysemys_picta_bellii
ENSSDUG00000020166cnot210087.595ENSCANG00000037683CNOT29686.641Colobus_angolensis_palliatus
ENSSDUG00000020166cnot210087.595ENSCGRG00001016595Cnot29489.787Cricetulus_griseus_chok1gshd
ENSSDUG00000020166cnot27990.534ENSCGRG00000001043Cnot29990.534Cricetulus_griseus_crigri
ENSSDUG00000020166cnot210078.558ENSCSEG00000020129-10079.482Cynoglossus_semilaevis
ENSSDUG00000020166cnot29095.949ENSCSEG00000015529cnot29795.949Cynoglossus_semilaevis
ENSSDUG00000020166cnot210074.954ENSCVAG00000019882CNOT210074.770Cyprinodon_variegatus
ENSSDUG00000020166cnot27593.598ENSCVAG00000003227cnot29992.771Cyprinodon_variegatus
ENSSDUG00000020166cnot210089.544ENSDARG00000061802cnot210089.544Danio_rerio
ENSSDUG00000020166cnot210087.072ENSDNOG00000019444CNOT29686.122Dasypus_novemcinctus
ENSSDUG00000020166cnot210087.595ENSDORG00000011201Cnot210090.330Dipodomys_ordii
ENSSDUG00000020166cnot25256.219FBgn0017550Rga5452.174Drosophila_melanogaster
ENSSDUG00000020166cnot210087.405ENSETEG00000007655CNOT29686.450Echinops_telfairi
ENSSDUG00000020166cnot210064.137ENSEBUG00000004355cnot210063.188Eptatretus_burgeri
ENSSDUG00000020166cnot210087.023ENSEASG00005008113CNOT29886.069Equus_asinus_asinus
ENSSDUG00000020166cnot210087.214ENSECAG00000013864CNOT29886.260Equus_caballus
ENSSDUG00000020166cnot26795.918ENSEEUG00000003003CNOT26695.918Erinaceus_europaeus
ENSSDUG00000020166cnot210087.545ENSELUG00000007279cnot29988.448Esox_lucius
ENSSDUG00000020166cnot210087.810ENSELUG00000012055CNOT29887.810Esox_lucius
ENSSDUG00000020166cnot210087.595ENSFCAG00000024278CNOT210096.859Felis_catus
ENSSDUG00000020166cnot210087.023ENSFALG00000010251CNOT29986.069Ficedula_albicollis
ENSSDUG00000020166cnot210087.977ENSFDAG00000008421CNOT210090.769Fukomys_damarensis
ENSSDUG00000020166cnot210091.969ENSFHEG00000009600cnot210091.969Fundulus_heteroclitus
ENSSDUG00000020166cnot210076.243ENSFHEG00000012921-10076.243Fundulus_heteroclitus
ENSSDUG00000020166cnot210096.198ENSGMOG00000016382cnot210096.198Gadus_morhua
ENSSDUG00000020166cnot210087.214ENSGALG00000010042CNOT210086.260Gallus_gallus
ENSSDUG00000020166cnot210092.161ENSGAFG00000021852cnot210092.161Gambusia_affinis
ENSSDUG00000020166cnot210076.296ENSGAFG00000018811-10075.926Gambusia_affinis
ENSSDUG00000020166cnot210097.343ENSGACG00000013517cnot210097.343Gasterosteus_aculeatus
ENSSDUG00000020166cnot210074.109ENSGACG00000015711-10074.109Gasterosteus_aculeatus
ENSSDUG00000020166cnot210087.405ENSGAGG00000025593CNOT29886.450Gopherus_agassizii
ENSSDUG00000020166cnot210087.595ENSGGOG00000027402CNOT210095.604Gorilla_gorilla
ENSSDUG00000020166cnot210097.897ENSHBUG00000000166cnot210097.897Haplochromis_burtoni
ENSSDUG00000020166cnot210080.639ENSHBUG00000016226CNOT210080.675Haplochromis_burtoni
ENSSDUG00000020166cnot210087.405ENSHGLG00000007294CNOT210090.110Heterocephalus_glaber_female
ENSSDUG00000020166cnot210087.405ENSHGLG00100014317CNOT210090.110Heterocephalus_glaber_male
ENSSDUG00000020166cnot210094.275ENSHCOG00000008229cnot210095.420Hippocampus_comes
ENSSDUG00000020166cnot210090.057ENSIPUG00000018563cnot210090.057Ictalurus_punctatus
ENSSDUG00000020166cnot210083.588ENSIPUG00000016424CNOT29582.634Ictalurus_punctatus
ENSSDUG00000020166cnot210087.595ENSSTOG00000011114CNOT29886.641Ictidomys_tridecemlineatus
ENSSDUG00000020166cnot210087.595ENSJJAG00000021519Cnot29489.787Jaculus_jaculus
ENSSDUG00000020166cnot210073.675ENSKMAG00000008167-10075.229Kryptolebias_marmoratus
ENSSDUG00000020166cnot210093.881ENSKMAG00000000577cnot210093.881Kryptolebias_marmoratus
ENSSDUG00000020166cnot210096.558ENSLBEG00000004046cnot210096.558Labrus_bergylta
ENSSDUG00000020166cnot210079.348ENSLBEG00000014428-9784.277Labrus_bergylta
ENSSDUG00000020166cnot210086.260ENSLACG00000007016CNOT210086.260Latimeria_chalumnae
ENSSDUG00000020166cnot210089.885ENSLOCG00000016216cnot29889.885Lepisosteus_oculatus
ENSSDUG00000020166cnot210087.595ENSLAFG00000004789CNOT29686.641Loxodonta_africana
ENSSDUG00000020166cnot210087.595ENSMFAG00000034373CNOT29886.641Macaca_fascicularis
ENSSDUG00000020166cnot210087.595ENSMMUG00000014853CNOT29886.641Macaca_mulatta
ENSSDUG00000020166cnot210087.595ENSMNEG00000045426CNOT210096.859Macaca_nemestrina
ENSSDUG00000020166cnot210087.595ENSMLEG00000041145CNOT29886.641Mandrillus_leucophaeus
ENSSDUG00000020166cnot210098.088ENSMAMG00000002615cnot210098.088Mastacembelus_armatus
ENSSDUG00000020166cnot210078.165ENSMAMG00000019519CNOT210088.529Mastacembelus_armatus
ENSSDUG00000020166cnot210080.639ENSMZEG00005016159CNOT210080.675Maylandia_zebra
ENSSDUG00000020166cnot210097.897ENSMZEG00005017275cnot210097.897Maylandia_zebra
ENSSDUG00000020166cnot210081.489ENSMGAG00000010615CNOT29680.534Meleagris_gallopavo
ENSSDUG00000020166cnot210087.405ENSMAUG00000012049Cnot210090.330Mesocricetus_auratus
ENSSDUG00000020166cnot210087.595ENSMICG00000001644CNOT29886.641Microcebus_murinus
ENSSDUG00000020166cnot210087.595ENSMOCG00000011255Cnot210090.330Microtus_ochrogaster
ENSSDUG00000020166cnot210097.706ENSMMOG00000018877cnot210097.706Mola_mola
ENSSDUG00000020166cnot210081.238ENSMMOG00000006017CNOT210081.614Mola_mola
ENSSDUG00000020166cnot210086.641ENSMODG00000020387CNOT29385.687Monodelphis_domestica
ENSSDUG00000020166cnot210097.132ENSMALG00000013354cnot210097.132Monopterus_albus
ENSSDUG00000020166cnot210078.349ENSMALG00000008200CNOT210079.817Monopterus_albus
ENSSDUG00000020166cnot210087.023MGP_CAROLIEiJ_G0015822Cnot29886.069Mus_caroli
ENSSDUG00000020166cnot210087.405ENSMUSG00000020166Cnot210090.110Mus_musculus
ENSSDUG00000020166cnot210086.832MGP_PahariEiJ_G0031265Cnot29885.878Mus_pahari
ENSSDUG00000020166cnot210087.405MGP_SPRETEiJ_G0016644Cnot29886.450Mus_spretus
ENSSDUG00000020166cnot210087.595ENSMPUG00000017494CNOT29686.641Mustela_putorius_furo
ENSSDUG00000020166cnot210087.595ENSMLUG00000012301CNOT29686.832Myotis_lucifugus
ENSSDUG00000020166cnot210087.405ENSNGAG00000020842Cnot210090.110Nannospalax_galili
ENSSDUG00000020166cnot210080.639ENSNBRG00000015257CNOT210080.675Neolamprologus_brichardi
ENSSDUG00000020166cnot210087.595ENSNLEG00000004064CNOT29589.787Nomascus_leucogenys
ENSSDUG00000020166cnot210064.695ENSOPRG00000002600CNOT29663.740Ochotona_princeps
ENSSDUG00000020166cnot210087.595ENSODEG00000004532CNOT29686.641Octodon_degus
ENSSDUG00000020166cnot210097.514ENSONIG00000010467cnot210097.514Oreochromis_niloticus
ENSSDUG00000020166cnot210079.259ENSONIG00000009907CNOT210080.370Oreochromis_niloticus
ENSSDUG00000020166cnot210087.405ENSOANG00000005959CNOT29586.450Ornithorhynchus_anatinus
ENSSDUG00000020166cnot210087.214ENSOCUG00000009951CNOT29586.260Oryctolagus_cuniculus
ENSSDUG00000020166cnot210078.967ENSORLG00000017361CNOT210081.111Oryzias_latipes
ENSSDUG00000020166cnot210092.748ENSORLG00000016454cnot210092.748Oryzias_latipes
ENSSDUG00000020166cnot210079.151ENSORLG00020005328CNOT210081.296Oryzias_latipes_hni
ENSSDUG00000020166cnot210092.176ENSORLG00020009002cnot210091.412Oryzias_latipes_hni
ENSSDUG00000020166cnot28586.771ENSORLG00015022502cnot29489.327Oryzias_latipes_hsok
ENSSDUG00000020166cnot210078.967ENSORLG00015004707CNOT210081.111Oryzias_latipes_hsok
ENSSDUG00000020166cnot210079.667ENSOMEG00000022902CNOT29887.647Oryzias_melastigma
ENSSDUG00000020166cnot210093.499ENSOMEG00000023230cnot210093.499Oryzias_melastigma
ENSSDUG00000020166cnot210087.023ENSOGAG00000008391-9686.069Otolemur_garnettii
ENSSDUG00000020166cnot210071.183ENSOGAG00000031982-9770.992Otolemur_garnettii
ENSSDUG00000020166cnot210087.786ENSOARG00000020211CNOT29686.832Ovis_aries
ENSSDUG00000020166cnot210087.595ENSPPAG00000042482CNOT210086.641Pan_paniscus
ENSSDUG00000020166cnot210087.595ENSPPRG00000004080CNOT210096.859Panthera_pardus
ENSSDUG00000020166cnot210087.595ENSPTIG00000007082CNOT29489.787Panthera_tigris_altaica
ENSSDUG00000020166cnot210087.595ENSPTRG00000005216CNOT29689.787Pan_troglodytes
ENSSDUG00000020166cnot210087.595ENSPANG00000018112CNOT29886.641Papio_anubis
ENSSDUG00000020166cnot210087.595ENSPKIG00000022871CNOT210087.595Paramormyrops_kingsleyae
ENSSDUG00000020166cnot210088.550ENSPKIG00000022757cnot210088.550Paramormyrops_kingsleyae
ENSSDUG00000020166cnot210087.595ENSPSIG00000015414CNOT210086.641Pelodiscus_sinensis
ENSSDUG00000020166cnot27688.856ENSPMGG00000016559CNOT210088.856Periophthalmus_magnuspinnatus
ENSSDUG00000020166cnot210090.133ENSPMGG00000009456cnot210090.892Periophthalmus_magnuspinnatus
ENSSDUG00000020166cnot210087.595ENSPEMG00000023296Cnot210090.330Peromyscus_maniculatus_bairdii
ENSSDUG00000020166cnot210070.755ENSPMAG00000002220cnot210069.811Petromyzon_marinus
ENSSDUG00000020166cnot210086.450ENSPCIG00000010670CNOT29785.496Phascolarctos_cinereus
ENSSDUG00000020166cnot210092.352ENSPFOG00000012236cnot210092.352Poecilia_formosa
ENSSDUG00000020166cnot210075.926ENSPFOG00000015440-10075.370Poecilia_formosa
ENSSDUG00000020166cnot210092.161ENSPLAG00000006094cnot210092.161Poecilia_latipinna
ENSSDUG00000020166cnot210075.926ENSPLAG00000007644-10075.370Poecilia_latipinna
ENSSDUG00000020166cnot210075.926ENSPMEG00000023331-9688.657Poecilia_mexicana
ENSSDUG00000020166cnot210092.352ENSPMEG00000012236cnot210092.352Poecilia_mexicana
ENSSDUG00000020166cnot210091.969ENSPREG00000020804cnot210091.969Poecilia_reticulata
ENSSDUG00000020166cnot210076.067ENSPREG00000006034CNOT210076.067Poecilia_reticulata
ENSSDUG00000020166cnot28789.207ENSPPYG00000004765CNOT29589.189Pongo_abelii
ENSSDUG00000020166cnot210087.595ENSPCAG00000000962CNOT29686.641Procavia_capensis
ENSSDUG00000020166cnot210087.595ENSPCOG00000028865CNOT29886.982Propithecus_coquereli
ENSSDUG00000020166cnot210079.771ENSPVAG00000007074CNOT29678.817Pteropus_vampyrus
ENSSDUG00000020166cnot210080.639ENSPNYG00000009888CNOT210080.675Pundamilia_nyererei
ENSSDUG00000020166cnot210097.897ENSPNYG00000021545cnot210097.897Pundamilia_nyererei
ENSSDUG00000020166cnot210090.458ENSPNAG00000015107cnot210090.458Pygocentrus_nattereri
ENSSDUG00000020166cnot210086.450ENSPNAG00000021540CNOT29986.450Pygocentrus_nattereri
ENSSDUG00000020166cnot210087.405ENSRNOG00000004909Cnot29989.953Rattus_norvegicus
ENSSDUG00000020166cnot210087.595ENSRBIG00000039989CNOT210096.859Rhinopithecus_bieti
ENSSDUG00000020166cnot210087.595ENSRROG00000042572CNOT210086.641Rhinopithecus_roxellana
ENSSDUG00000020166cnot210087.595ENSSBOG00000026423CNOT29789.787Saimiri_boliviensis_boliviensis
ENSSDUG00000020166cnot210086.641ENSSHAG00000005001CNOT29685.687Sarcophilus_harrisii
ENSSDUG00000020166cnot210089.695ENSSFOG00015017789CNOT210089.695Scleropages_formosus
ENSSDUG00000020166cnot210090.076ENSSFOG00015005243cnot210090.076Scleropages_formosus
ENSSDUG00000020166cnot210097.905ENSSMAG00000009857cnot210097.905Scophthalmus_maximus
ENSSDUG00000020166cnot210078.799ENSSMAG00000006667CNOT210079.401Scophthalmus_maximus
ENSSDUG00000020166cnot2100100.000ENSSLDG00000010952cnot2100100.000Seriola_lalandi_dorsalis
ENSSDUG00000020166cnot29381.076ENSSLDG00000009614-9979.264Seriola_lalandi_dorsalis
ENSSDUG00000020166cnot28889.783ENSSARG00000001038CNOT28589.783Sorex_araneus
ENSSDUG00000020166cnot28698.670ENSSPAG00000006784cnot210098.670Stegastes_partitus
ENSSDUG00000020166cnot210078.453ENSSPAG00000013982-10079.742Stegastes_partitus
ENSSDUG00000020166cnot210087.214ENSSSCG00000000502CNOT210089.890Sus_scrofa
ENSSDUG00000020166cnot210087.023ENSTGUG00000007018CNOT29986.069Taeniopygia_guttata
ENSSDUG00000020166cnot210096.367ENSTRUG00000002924cnot210096.367Takifugu_rubripes
ENSSDUG00000020166cnot210096.176ENSTNIG00000008354cnot29696.176Tetraodon_nigroviridis
ENSSDUG00000020166cnot210076.592ENSTNIG00000002496CNOT29776.592Tetraodon_nigroviridis
ENSSDUG00000020166cnot210084.601ENSTTRG00000004829CNOT29683.650Tursiops_truncatus
ENSSDUG00000020166cnot210087.595ENSUAMG00000016753CNOT210086.641Ursus_americanus
ENSSDUG00000020166cnot210087.595ENSUMAG00000020863CNOT29886.641Ursus_maritimus
ENSSDUG00000020166cnot210085.115ENSVPAG00000006870CNOT29684.160Vicugna_pacos
ENSSDUG00000020166cnot29987.476ENSVVUG00000008840CNOT29986.145Vulpes_vulpes
ENSSDUG00000020166cnot210078.517ENSXETG00000011385cnot29986.176Xenopus_tropicalis
ENSSDUG00000020166cnot28994.444ENSXCOG00000002160cnot29694.456Xiphophorus_couchianus
ENSSDUG00000020166cnot26389.489ENSXCOG00000013026CNOT210089.254Xiphophorus_couchianus
ENSSDUG00000020166cnot210076.296ENSXMAG00000010366CNOT29489.254Xiphophorus_maculatus
ENSSDUG00000020166cnot210092.352ENSXMAG00000019279cnot210092.352Xiphophorus_maculatus

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