EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000020213 (Gene tree)
Gene ID: 111227449
Gene Symbol: c1d
Alias: zgc:103509
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2476 bases
Position: chrBDQW01000187.1:1638346-1640821
Accession: 111227449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000027972	Sas10_Utp3	PF04000.15	5.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000028463	-	1176	XM_022752953	ENSSDUP00000027972	155 (aa)	XP_022608674	UPI000BBEC47E

Gene Model

Click here to download ENSSDUG00000020213's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020213	c1d	85	65.152	ENSG00000197223	C1D	94	65.152	Homo_sapiens
ENSSDUG00000020213	c1d	100	83.871	ENSAPOG00000005466	c1d	100	83.871	Acanthochromis_polyacanthus
ENSSDUG00000020213	c1d	85	65.152	ENSAMEG00000004859	C1D	90	65.152	Ailuropoda_melanoleuca
ENSSDUG00000020213	c1d	86	90.977	ENSACIG00000012684	c1d	86	90.977	Amphilophus_citrinellus
ENSSDUG00000020213	c1d	100	84.516	ENSAOCG00000020354	c1d	100	84.516	Amphiprion_ocellaris
ENSSDUG00000020213	c1d	100	85.161	ENSAPEG00000001403	c1d	100	85.161	Amphiprion_percula
ENSSDUG00000020213	c1d	99	91.558	ENSATEG00000012922	c1d	99	91.558	Anabas_testudineus
ENSSDUG00000020213	c1d	86	64.444	ENSAPLG00000009320	C1D	93	64.444	Anas_platyrhynchos
ENSSDUG00000020213	c1d	76	73.729	ENSACAG00000001337	C1D	97	73.729	Anolis_carolinensis
ENSSDUG00000020213	c1d	85	61.364	ENSANAG00000005773	-	94	61.364	Aotus_nancymaae
ENSSDUG00000020213	c1d	85	64.394	ENSANAG00000035972	-	94	64.394	Aotus_nancymaae
ENSSDUG00000020213	c1d	99	79.739	ENSACLG00000026206	c1d	99	82.353	Astatotilapia_calliptera
ENSSDUG00000020213	c1d	85	72.519	ENSAMXG00000043212	c1d	90	72.519	Astyanax_mexicanus
ENSSDUG00000020213	c1d	91	62.411	ENSBTAG00000049002	C1D	100	62.411	Bos_taurus
ENSSDUG00000020213	c1d	72	63.964	ENSCJAG00000044668	-	87	63.964	Callithrix_jacchus
ENSSDUG00000020213	c1d	85	65.152	ENSCJAG00000006589	C1D	87	65.152	Callithrix_jacchus
ENSSDUG00000020213	c1d	91	63.830	ENSCAFG00000030099	C1D	100	63.830	Canis_familiaris
ENSSDUG00000020213	c1d	91	63.830	ENSCAFG00020026997	C1D	100	63.830	Canis_lupus_dingo
ENSSDUG00000020213	c1d	91	62.411	ENSCHIG00000025729	C1D	100	62.411	Capra_hircus
ENSSDUG00000020213	c1d	91	62.411	ENSTSYG00000035739	-	100	62.411	Carlito_syrichta
ENSSDUG00000020213	c1d	70	66.972	ENSTSYG00000026573	-	69	66.972	Carlito_syrichta
ENSSDUG00000020213	c1d	73	61.947	ENSCAPG00000011523	-	94	61.947	Cavia_aperea
ENSSDUG00000020213	c1d	85	65.909	ENSCPOG00000037986	-	94	65.909	Cavia_porcellus
ENSSDUG00000020213	c1d	73	62.832	ENSCPOG00000020112	-	94	62.832	Cavia_porcellus
ENSSDUG00000020213	c1d	85	65.152	ENSCCAG00000030405	-	94	65.152	Cebus_capucinus
ENSSDUG00000020213	c1d	85	65.152	ENSCATG00000043348	-	94	65.152	Cercocebus_atys
ENSSDUG00000020213	c1d	90	64.029	ENSCATG00000045336	C1D	95	64.029	Cercocebus_atys
ENSSDUG00000020213	c1d	91	62.411	ENSCLAG00000011883	C1D	100	62.411	Chinchilla_lanigera
ENSSDUG00000020213	c1d	85	64.394	ENSCSAG00000014811	C1D	94	64.394	Chlorocebus_sabaeus
ENSSDUG00000020213	c1d	91	62.411	ENSCHOG00000006719	C1D	79	62.411	Choloepus_hoffmanni
ENSSDUG00000020213	c1d	87	64.444	ENSCPBG00000014451	C1D	91	64.444	Chrysemys_picta_bellii
ENSSDUG00000020213	c1d	97	41.139	ENSCING00000020906	-	83	43.038	Ciona_intestinalis
ENSSDUG00000020213	c1d	77	47.500	ENSCSAVG00000000150	-	69	47.500	Ciona_savignyi
ENSSDUG00000020213	c1d	90	63.309	ENSCANG00000035564	C1D	95	63.309	Colobus_angolensis_palliatus
ENSSDUG00000020213	c1d	69	68.224	ENSCANG00000036599	-	87	68.224	Colobus_angolensis_palliatus
ENSSDUG00000020213	c1d	84	66.154	ENSCGRG00001023376	C1d	92	66.154	Cricetulus_griseus_chok1gshd
ENSSDUG00000020213	c1d	84	66.154	ENSCGRG00000010245	C1d	92	66.154	Cricetulus_griseus_crigri
ENSSDUG00000020213	c1d	100	81.935	ENSCSEG00000000587	c1d	97	88.406	Cynoglossus_semilaevis
ENSSDUG00000020213	c1d	100	80.645	ENSCVAG00000004603	c1d	100	80.645	Cyprinodon_variegatus
ENSSDUG00000020213	c1d	79	69.919	ENSDARG00000021112	c1d	91	66.418	Danio_rerio
ENSSDUG00000020213	c1d	91	55.319	ENSDNOG00000046068	-	100	55.319	Dasypus_novemcinctus
ENSSDUG00000020213	c1d	91	60.993	ENSDORG00000003300	C1d	100	60.993	Dipodomys_ordii
ENSSDUG00000020213	c1d	55	73.256	ENSETEG00000014857	C1D	91	73.256	Echinops_telfairi
ENSSDUG00000020213	c1d	75	53.448	ENSEBUG00000006874	c1d	73	53.448	Eptatretus_burgeri
ENSSDUG00000020213	c1d	91	62.411	ENSEASG00005007307	C1D	92	62.411	Equus_asinus_asinus
ENSSDUG00000020213	c1d	85	65.152	ENSECAG00000002187	C1D	94	65.152	Equus_caballus
ENSSDUG00000020213	c1d	85	76.336	ENSELUG00000014823	c1d	90	76.336	Esox_lucius
ENSSDUG00000020213	c1d	91	62.411	ENSFCAG00000028933	C1D	100	62.411	Felis_catus
ENSSDUG00000020213	c1d	86	62.222	ENSFALG00000013640	C1D	82	62.222	Ficedula_albicollis
ENSSDUG00000020213	c1d	91	51.408	ENSFDAG00000014175	-	100	51.408	Fukomys_damarensis
ENSSDUG00000020213	c1d	91	62.411	ENSFDAG00000010462	-	100	62.411	Fukomys_damarensis
ENSSDUG00000020213	c1d	100	80.000	ENSFHEG00000010545	c1d	100	80.000	Fundulus_heteroclitus
ENSSDUG00000020213	c1d	77	80.833	ENSGMOG00000013911	-	95	80.833	Gadus_morhua
ENSSDUG00000020213	c1d	89	63.043	ENSGALG00000008765	C1D	96	63.043	Gallus_gallus
ENSSDUG00000020213	c1d	96	80.537	ENSGAFG00000012578	c1d	95	80.537	Gambusia_affinis
ENSSDUG00000020213	c1d	83	86.719	ENSGACG00000011981	c1d	100	86.719	Gasterosteus_aculeatus
ENSSDUG00000020213	c1d	79	67.213	ENSGAGG00000013383	C1D	92	63.971	Gopherus_agassizii
ENSSDUG00000020213	c1d	85	62.879	ENSGGOG00000022296	-	94	62.879	Gorilla_gorilla
ENSSDUG00000020213	c1d	90	60.432	ENSGGOG00000025808	-	79	60.432	Gorilla_gorilla
ENSSDUG00000020213	c1d	91	62.411	ENSGGOG00000025982	-	78	62.411	Gorilla_gorilla
ENSSDUG00000020213	c1d	97	80.795	ENSHBUG00000018531	c1d	87	83.444	Haplochromis_burtoni
ENSSDUG00000020213	c1d	84	65.385	ENSHGLG00000012332	-	94	65.152	Heterocephalus_glaber_female
ENSSDUG00000020213	c1d	91	57.447	ENSHGLG00000021219	-	100	57.447	Heterocephalus_glaber_female
ENSSDUG00000020213	c1d	91	58.156	ENSHGLG00100019951	-	100	58.156	Heterocephalus_glaber_male
ENSSDUG00000020213	c1d	91	62.411	ENSHGLG00100000221	-	100	62.411	Heterocephalus_glaber_male
ENSSDUG00000020213	c1d	97	74.342	ENSHCOG00000014589	c1d	100	74.834	Hippocampus_comes
ENSSDUG00000020213	c1d	97	74.342	ENSHCOG00000014568	C1D	100	74.834	Hippocampus_comes
ENSSDUG00000020213	c1d	91	63.194	ENSIPUG00000018661	c1d	100	63.194	Ictalurus_punctatus
ENSSDUG00000020213	c1d	91	62.411	ENSSTOG00000012346	C1D	100	62.411	Ictidomys_tridecemlineatus
ENSSDUG00000020213	c1d	89	55.072	ENSJJAG00000016086	-	100	55.072	Jaculus_jaculus
ENSSDUG00000020213	c1d	81	63.566	ENSJJAG00000023186	-	98	63.566	Jaculus_jaculus
ENSSDUG00000020213	c1d	89	59.420	ENSJJAG00000005044	-	100	59.420	Jaculus_jaculus
ENSSDUG00000020213	c1d	89	60.145	ENSJJAG00000009540	-	100	60.145	Jaculus_jaculus
ENSSDUG00000020213	c1d	100	82.581	ENSKMAG00000015077	c1d	100	82.581	Kryptolebias_marmoratus
ENSSDUG00000020213	c1d	100	87.097	ENSLBEG00000008351	c1d	100	87.097	Labrus_bergylta
ENSSDUG00000020213	c1d	92	66.197	ENSLACG00000007516	C1D	93	66.197	Latimeria_chalumnae
ENSSDUG00000020213	c1d	98	63.816	ENSLOCG00000016024	c1d	97	63.816	Lepisosteus_oculatus
ENSSDUG00000020213	c1d	91	61.702	ENSLAFG00000002083	C1D	100	61.702	Loxodonta_africana
ENSSDUG00000020213	c1d	85	65.152	ENSMFAG00000034034	-	94	65.152	Macaca_fascicularis
ENSSDUG00000020213	c1d	90	64.029	ENSMFAG00000034261	C1D	95	64.029	Macaca_fascicularis
ENSSDUG00000020213	c1d	90	62.590	ENSMFAG00000028681	-	95	62.590	Macaca_fascicularis
ENSSDUG00000020213	c1d	90	62.590	ENSMMUG00000017209	-	95	62.590	Macaca_mulatta
ENSSDUG00000020213	c1d	85	64.394	ENSMMUG00000043184	-	94	64.394	Macaca_mulatta
ENSSDUG00000020213	c1d	90	64.029	ENSMMUG00000041557	C1D	96	64.029	Macaca_mulatta
ENSSDUG00000020213	c1d	85	65.152	ENSMNEG00000020626	-	94	65.152	Macaca_nemestrina
ENSSDUG00000020213	c1d	90	64.029	ENSMNEG00000040612	C1D	95	64.029	Macaca_nemestrina
ENSSDUG00000020213	c1d	90	64.029	ENSMLEG00000027619	C1D	95	64.029	Mandrillus_leucophaeus
ENSSDUG00000020213	c1d	85	65.152	ENSMLEG00000028412	-	94	65.152	Mandrillus_leucophaeus
ENSSDUG00000020213	c1d	100	88.387	ENSMAMG00000022156	c1d	100	88.387	Mastacembelus_armatus
ENSSDUG00000020213	c1d	97	81.333	ENSMZEG00005027343	c1d	99	84.000	Maylandia_zebra
ENSSDUG00000020213	c1d	89	61.594	ENSMGAG00000004517	C1D	97	61.594	Meleagris_gallopavo
ENSSDUG00000020213	c1d	84	66.154	ENSMAUG00000008974	C1d	92	66.154	Mesocricetus_auratus
ENSSDUG00000020213	c1d	91	63.830	ENSMICG00000032141	C1D	100	63.830	Microcebus_murinus
ENSSDUG00000020213	c1d	84	66.154	ENSMOCG00000010860	C1d	92	66.154	Microtus_ochrogaster
ENSSDUG00000020213	c1d	100	78.710	ENSMMOG00000007332	c1d	100	78.710	Mola_mola
ENSSDUG00000020213	c1d	87	63.971	ENSMODG00000003561	C1D	96	63.971	Monodelphis_domestica
ENSSDUG00000020213	c1d	100	89.032	ENSMALG00000020864	c1d	100	89.032	Monopterus_albus
ENSSDUG00000020213	c1d	85	65.909	MGP_CAROLIEiJ_G0016110	C1d	100	68.644	Mus_caroli
ENSSDUG00000020213	c1d	85	65.909	ENSMUSG00000000581	C1d	100	68.644	Mus_musculus
ENSSDUG00000020213	c1d	90	64.029	MGP_PahariEiJ_G0016781	C1d	100	69.492	Mus_pahari
ENSSDUG00000020213	c1d	85	65.909	MGP_SPRETEiJ_G0016952	C1d	100	68.644	Mus_spretus
ENSSDUG00000020213	c1d	91	63.121	ENSMPUG00000006224	C1D	100	63.121	Mustela_putorius_furo
ENSSDUG00000020213	c1d	90	64.029	ENSMLUG00000010791	-	99	64.029	Myotis_lucifugus
ENSSDUG00000020213	c1d	90	62.590	ENSMLUG00000024947	-	99	62.590	Myotis_lucifugus
ENSSDUG00000020213	c1d	90	61.151	ENSMLUG00000029990	-	99	61.151	Myotis_lucifugus
ENSSDUG00000020213	c1d	91	60.284	ENSNGAG00000011872	-	100	60.284	Nannospalax_galili
ENSSDUG00000020213	c1d	91	58.156	ENSNGAG00000016675	-	100	58.156	Nannospalax_galili
ENSSDUG00000020213	c1d	81	59.524	ENSNGAG00000012482	-	100	59.524	Nannospalax_galili
ENSSDUG00000020213	c1d	99	78.571	ENSNBRG00000010704	c1d	99	82.667	Neolamprologus_brichardi
ENSSDUG00000020213	c1d	85	65.152	ENSNLEG00000032919	-	73	65.152	Nomascus_leucogenys
ENSSDUG00000020213	c1d	91	62.411	ENSOPRG00000009586	C1D	100	62.411	Ochotona_princeps
ENSSDUG00000020213	c1d	85	65.152	ENSODEG00000011242	-	94	65.152	Octodon_degus
ENSSDUG00000020213	c1d	85	65.152	ENSODEG00000018885	-	95	65.152	Octodon_degus
ENSSDUG00000020213	c1d	80	58.871	ENSODEG00000018525	-	88	58.871	Octodon_degus
ENSSDUG00000020213	c1d	99	79.870	ENSONIG00000001233	c1d	99	82.468	Oreochromis_niloticus
ENSSDUG00000020213	c1d	61	78.947	ENSOANG00000008385	C1D	98	72.477	Ornithorhynchus_anatinus
ENSSDUG00000020213	c1d	88	64.964	ENSOCUG00000009771	-	96	64.964	Oryctolagus_cuniculus
ENSSDUG00000020213	c1d	88	64.964	ENSOCUG00000025587	-	96	64.964	Oryctolagus_cuniculus
ENSSDUG00000020213	c1d	95	76.190	ENSORLG00000021968	c1d	94	76.190	Oryzias_latipes
ENSSDUG00000020213	c1d	95	76.871	ENSORLG00020000507	c1d	95	76.871	Oryzias_latipes_hni
ENSSDUG00000020213	c1d	99	74.194	ENSORLG00015004594	c1d	99	74.194	Oryzias_latipes_hsok
ENSSDUG00000020213	c1d	99	75.325	ENSOMEG00000004672	c1d	99	75.325	Oryzias_melastigma
ENSSDUG00000020213	c1d	91	60.993	ENSOGAG00000027934	-	100	60.993	Otolemur_garnettii
ENSSDUG00000020213	c1d	91	62.411	ENSOARG00000019931	C1D	99	62.411	Ovis_aries
ENSSDUG00000020213	c1d	85	62.121	ENSPPAG00000040091	-	76	62.121	Pan_paniscus
ENSSDUG00000020213	c1d	85	65.152	ENSPPAG00000037847	-	94	65.152	Pan_paniscus
ENSSDUG00000020213	c1d	91	62.411	ENSPPRG00000017045	-	100	62.411	Panthera_pardus
ENSSDUG00000020213	c1d	85	42.424	ENSPPRG00000022830	-	92	42.424	Panthera_pardus
ENSSDUG00000020213	c1d	91	62.411	ENSPTIG00000009414	C1D	100	62.411	Panthera_tigris_altaica
ENSSDUG00000020213	c1d	85	65.152	ENSPTRG00000023558	C1D	94	65.152	Pan_troglodytes
ENSSDUG00000020213	c1d	85	65.909	ENSPANG00000000501	-	94	65.909	Papio_anubis
ENSSDUG00000020213	c1d	90	64.029	ENSPANG00000002886	C1D	74	64.029	Papio_anubis
ENSSDUG00000020213	c1d	98	58.553	ENSPKIG00000004877	c1d	96	58.553	Paramormyrops_kingsleyae
ENSSDUG00000020213	c1d	88	63.971	ENSPSIG00000010015	C1D	94	63.971	Pelodiscus_sinensis
ENSSDUG00000020213	c1d	100	83.871	ENSPMGG00000009326	c1d	100	83.871	Periophthalmus_magnuspinnatus
ENSSDUG00000020213	c1d	87	63.971	ENSPCIG00000018629	-	96	63.971	Phascolarctos_cinereus
ENSSDUG00000020213	c1d	90	58.273	ENSPCIG00000006831	-	97	58.273	Phascolarctos_cinereus
ENSSDUG00000020213	c1d	100	80.645	ENSPFOG00000003686	c1d	100	80.645	Poecilia_formosa
ENSSDUG00000020213	c1d	100	80.645	ENSPLAG00000000228	c1d	100	80.645	Poecilia_latipinna
ENSSDUG00000020213	c1d	100	80.645	ENSPMEG00000023213	c1d	100	80.645	Poecilia_mexicana
ENSSDUG00000020213	c1d	100	81.290	ENSPREG00000000742	c1d	100	81.290	Poecilia_reticulata
ENSSDUG00000020213	c1d	85	62.879	ENSPPYG00000002294	-	94	62.879	Pongo_abelii
ENSSDUG00000020213	c1d	85	65.152	ENSPPYG00000012354	C1D	73	65.152	Pongo_abelii
ENSSDUG00000020213	c1d	91	51.064	ENSPCAG00000010088	C1D	79	51.064	Procavia_capensis
ENSSDUG00000020213	c1d	91	63.830	ENSPCOG00000016112	C1D	100	63.830	Propithecus_coquereli
ENSSDUG00000020213	c1d	91	62.411	ENSPVAG00000012692	C1D	79	62.411	Pteropus_vampyrus
ENSSDUG00000020213	c1d	97	80.667	ENSPNYG00000008789	c1d	99	83.333	Pundamilia_nyererei
ENSSDUG00000020213	c1d	88	72.059	ENSPNAG00000004219	c1d	93	72.059	Pygocentrus_nattereri
ENSSDUG00000020213	c1d	85	65.909	ENSRNOG00000005982	C1d	94	65.909	Rattus_norvegicus
ENSSDUG00000020213	c1d	90	61.871	ENSRBIG00000026211	-	99	61.871	Rhinopithecus_bieti
ENSSDUG00000020213	c1d	90	64.029	ENSRROG00000029013	C1D	95	64.029	Rhinopithecus_roxellana
ENSSDUG00000020213	c1d	90	62.590	ENSRROG00000005944	-	99	62.590	Rhinopithecus_roxellana
ENSSDUG00000020213	c1d	85	65.152	ENSSBOG00000025275	C1D	94	65.152	Saimiri_boliviensis_boliviensis
ENSSDUG00000020213	c1d	87	63.971	ENSSHAG00000008352	C1D	65	63.971	Sarcophilus_harrisii
ENSSDUG00000020213	c1d	90	66.429	ENSSFOG00015010861	c1d	100	66.429	Scleropages_formosus
ENSSDUG00000020213	c1d	100	85.806	ENSSMAG00000019230	c1d	100	85.806	Scophthalmus_maximus
ENSSDUG00000020213	c1d	100	98.710	ENSSLDG00000017371	c1d	100	98.710	Seriola_lalandi_dorsalis
ENSSDUG00000020213	c1d	76	68.644	ENSSPUG00000006525	C1D	90	64.885	Sphenodon_punctatus
ENSSDUG00000020213	c1d	99	86.928	ENSSPAG00000008574	c1d	99	86.928	Stegastes_partitus
ENSSDUG00000020213	c1d	74	57.018	ENSSSCG00000035701	-	95	57.018	Sus_scrofa
ENSSDUG00000020213	c1d	91	62.411	ENSSSCG00000039331	-	100	62.411	Sus_scrofa
ENSSDUG00000020213	c1d	86	64.444	ENSTGUG00000002367	C1D	94	64.444	Taeniopygia_guttata
ENSSDUG00000020213	c1d	97	78.667	ENSTRUG00000012245	c1d	90	78.667	Takifugu_rubripes
ENSSDUG00000020213	c1d	95	81.633	ENSTNIG00000009827	c1d	99	81.633	Tetraodon_nigroviridis
ENSSDUG00000020213	c1d	91	62.411	ENSTBEG00000009797	C1D	100	62.411	Tupaia_belangeri
ENSSDUG00000020213	c1d	85	64.394	ENSTTRG00000013982	C1D	76	64.394	Tursiops_truncatus
ENSSDUG00000020213	c1d	91	53.472	ENSUAMG00000025246	C1D	100	53.472	Ursus_americanus
ENSSDUG00000020213	c1d	91	62.411	ENSUMAG00000021118	-	100	62.411	Ursus_maritimus
ENSSDUG00000020213	c1d	65	55.769	ENSUMAG00000006451	-	91	56.140	Ursus_maritimus
ENSSDUG00000020213	c1d	91	62.411	ENSVPAG00000012080	C1D	79	62.411	Vicugna_pacos
ENSSDUG00000020213	c1d	91	63.830	ENSVVUG00000027629	C1D	88	63.830	Vulpes_vulpes
ENSSDUG00000020213	c1d	80	68.548	ENSXETG00000025934	c1d	86	68.548	Xenopus_tropicalis
ENSSDUG00000020213	c1d	100	81.935	ENSXCOG00000013813	c1d	100	81.935	Xiphophorus_couchianus
ENSSDUG00000020213	c1d	100	81.290	ENSXMAG00000022273	c1d	100	81.290	Xiphophorus_maculatus