EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000020339 (Gene tree)
Gene ID: 111232999
Gene Symbol: YBX2
Alias: CSDA3|Contrin|MSY2
Full Name: Y-box binding protein 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3597 bases
Position: chrBDQW01000362.1:412039-415635
Accession: 111232999
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000028155	CSD	PF00313.22	2.1e-25	1	1
ENSSDUP00000028138	CSD	PF00313.22	2.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000028646	YBX2-202	1573	-	ENSSDUP00000028155	312 (aa)	-	-
ENSSDUT00000028629	YBX2-201	1180	XM_022760720	ENSSDUP00000028138	323 (aa)	XP_022616441	UPI000BBE8D8B

Gene Model

Click here to download ENSSDUG00000020339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020339's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020339	YBX2	100	82.175	ENSAPOG00000012329	YBX2	100	82.477	Acanthochromis_polyacanthus
ENSSDUG00000020339	YBX2	100	83.486	ENSAOCG00000003847	YBX2	100	83.792	Amphiprion_ocellaris
ENSSDUG00000020339	YBX2	100	84.098	ENSAPEG00000014010	YBX2	100	84.404	Amphiprion_percula
ENSSDUG00000020339	YBX2	100	77.616	ENSACLG00000004460	YBX2	100	77.616	Astatotilapia_calliptera
ENSSDUG00000020339	YBX2	99	63.030	ENSAMXG00000007090	YBX2	99	63.222	Astyanax_mexicanus
ENSSDUG00000020339	YBX2	100	77.846	ENSCSEG00000002588	YBX2	99	77.846	Cynoglossus_semilaevis
ENSSDUG00000020339	YBX2	100	72.156	ENSCVAG00000004075	YBX2	100	72.156	Cyprinodon_variegatus
ENSSDUG00000020339	YBX2	100	63.584	ENSELUG00000014487	YBX2	99	62.974	Esox_lucius
ENSSDUG00000020339	YBX2	100	73.030	ENSFHEG00000001823	YBX2	99	74.242	Fundulus_heteroclitus
ENSSDUG00000020339	YBX2	100	69.394	ENSGAFG00000005517	YBX2	100	67.674	Gambusia_affinis
ENSSDUG00000020339	YBX2	95	78.146	ENSGACG00000019392	-	100	75.602	Gasterosteus_aculeatus
ENSSDUG00000020339	YBX2	100	77.326	ENSHBUG00000002391	YBX2	100	77.326	Haplochromis_burtoni
ENSSDUG00000020339	YBX2	99	64.417	ENSHCOG00000004582	-	99	67.173	Hippocampus_comes
ENSSDUG00000020339	YBX2	96	57.862	ENSIPUG00000019571	YBX2	99	57.975	Ictalurus_punctatus
ENSSDUG00000020339	YBX2	100	74.924	ENSMAMG00000003631	YBX2	100	79.154	Mastacembelus_armatus
ENSSDUG00000020339	YBX2	100	77.616	ENSMZEG00005021709	YBX2	100	77.616	Maylandia_zebra
ENSSDUG00000020339	YBX2	100	76.385	ENSNBRG00000021159	YBX2	100	73.178	Neolamprologus_brichardi
ENSSDUG00000020339	YBX2	100	79.765	ENSONIG00000018954	YBX2	100	79.765	Oreochromis_niloticus
ENSSDUG00000020339	YBX2	100	67.069	ENSORLG00020010417	YBX2	88	67.069	Oryzias_latipes_hni
ENSSDUG00000020339	YBX2	100	67.372	ENSORLG00015007322	YBX2	88	67.372	Oryzias_latipes_hsok
ENSSDUG00000020339	YBX2	92	69.968	ENSOMEG00000010455	YBX2	100	68.235	Oryzias_melastigma
ENSSDUG00000020339	YBX2	100	70.000	ENSPFOG00000007181	YBX2	100	72.424	Poecilia_formosa
ENSSDUG00000020339	YBX2	100	72.783	ENSPLAG00000009381	YBX2	100	72.783	Poecilia_latipinna
ENSSDUG00000020339	YBX2	100	73.394	ENSPMEG00000002159	YBX2	100	73.394	Poecilia_mexicana
ENSSDUG00000020339	YBX2	96	73.802	ENSPREG00000013357	YBX2	100	73.780	Poecilia_reticulata
ENSSDUG00000020339	YBX2	100	77.616	ENSPNYG00000006649	YBX2	100	77.616	Pundamilia_nyererei
ENSSDUG00000020339	YBX2	98	59.688	ENSPNAG00000017142	YBX2	94	57.927	Pygocentrus_nattereri
ENSSDUG00000020339	YBX2	100	86.866	ENSSMAG00000009294	YBX2	100	87.164	Scophthalmus_maximus
ENSSDUG00000020339	YBX2	100	99.381	ENSSLDG00000010451	YBX2	100	99.381	Seriola_lalandi_dorsalis
ENSSDUG00000020339	YBX2	100	73.476	ENSTRUG00000011813	YBX2	100	73.780	Takifugu_rubripes
ENSSDUG00000020339	YBX2	99	73.846	ENSTNIG00000010139	YBX2	99	73.231	Tetraodon_nigroviridis
ENSSDUG00000020339	YBX2	100	72.866	ENSXMAG00000015755	YBX2	100	72.866	Xiphophorus_maculatus