EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000020401 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-275j6.5
Alias: gb:ct586343
Full Name: chromosome unknown C12orf65 homolog
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2601 bases
Position: chrBDQW01000290.1:378236-380836
Accession: 111230902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000028227	RF-1	PF00472.20	5.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000028718	-	2088	XM_022757792	ENSSDUP00000028227	157 (aa)	XP_022613513	-

Gene Model

Click here to download ENSSDUG00000020401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020401's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020401	si:ch211-275j6.5	84	55.714	ENSG00000130921	C12orf65	96	54.887	Homo_sapiens
ENSSDUG00000020401	si:ch211-275j6.5	100	71.515	ENSAPOG00000000995	si:ch211-275j6.5	97	71.515	Acanthochromis_polyacanthus
ENSSDUG00000020401	si:ch211-275j6.5	53	71.084	ENSAMEG00000015144	C12orf65	71	65.487	Ailuropoda_melanoleuca
ENSSDUG00000020401	si:ch211-275j6.5	82	86.047	ENSACIG00000001644	si:ch211-275j6.5	81	86.047	Amphilophus_citrinellus
ENSSDUG00000020401	si:ch211-275j6.5	82	87.597	ENSAOCG00000005589	si:ch211-275j6.5	82	87.597	Amphiprion_ocellaris
ENSSDUG00000020401	si:ch211-275j6.5	100	72.561	ENSAPEG00000024618	si:ch211-275j6.5	97	72.561	Amphiprion_percula
ENSSDUG00000020401	si:ch211-275j6.5	100	60.428	ENSATEG00000011661	si:ch211-275j6.5	100	60.428	Anabas_testudineus
ENSSDUG00000020401	si:ch211-275j6.5	73	69.298	ENSAPLG00000016073	C12orf65	95	69.298	Anas_platyrhynchos
ENSSDUG00000020401	si:ch211-275j6.5	87	63.699	ENSACAG00000015561	C12orf65	74	63.699	Anolis_carolinensis
ENSSDUG00000020401	si:ch211-275j6.5	73	56.557	ENSANAG00000022881	C12orf65	92	55.921	Aotus_nancymaae
ENSSDUG00000020401	si:ch211-275j6.5	82	89.147	ENSACLG00000023906	si:ch211-275j6.5	80	89.147	Astatotilapia_calliptera
ENSSDUG00000020401	si:ch211-275j6.5	95	63.087	ENSAMXG00000031765	si:ch211-275j6.5	90	63.087	Astyanax_mexicanus
ENSSDUG00000020401	si:ch211-275j6.5	97	54.777	ENSBTAG00000020503	C17H12orf65	91	54.777	Bos_taurus
ENSSDUG00000020401	si:ch211-275j6.5	66	61.682	ENSCJAG00000016579	C12orf65	84	59.854	Callithrix_jacchus
ENSSDUG00000020401	si:ch211-275j6.5	65	67.647	ENSCAFG00020016169	C12orf65	69	66.667	Canis_lupus_dingo
ENSSDUG00000020401	si:ch211-275j6.5	73	68.421	ENSCHIG00000022229	C12orf65	64	68.421	Capra_hircus
ENSSDUG00000020401	si:ch211-275j6.5	66	60.577	ENSCAPG00000014691	C12orf65	74	57.664	Cavia_aperea
ENSSDUG00000020401	si:ch211-275j6.5	66	60.577	ENSCPOG00000007583	C12orf65	74	57.664	Cavia_porcellus
ENSSDUG00000020401	si:ch211-275j6.5	82	57.252	ENSCATG00000040685	C12orf65	83	59.124	Cercocebus_atys
ENSSDUG00000020401	si:ch211-275j6.5	55	68.966	ENSCLAG00000014329	C12orf65	72	60.448	Chinchilla_lanigera
ENSSDUG00000020401	si:ch211-275j6.5	75	61.157	ENSCSAG00000002068	C12orf65	81	59.124	Chlorocebus_sabaeus
ENSSDUG00000020401	si:ch211-275j6.5	83	62.308	ENSCPBG00000025970	C12orf65	94	51.445	Chrysemys_picta_bellii
ENSSDUG00000020401	si:ch211-275j6.5	66	61.682	ENSCGRG00001013424	2810006K23Rik	74	59.124	Cricetulus_griseus_chok1gshd
ENSSDUG00000020401	si:ch211-275j6.5	66	61.682	ENSCGRG00000003037	2810006K23Rik	74	59.124	Cricetulus_griseus_crigri
ENSSDUG00000020401	si:ch211-275j6.5	85	69.173	ENSCSEG00000014536	si:ch211-275j6.5	80	69.173	Cynoglossus_semilaevis
ENSSDUG00000020401	si:ch211-275j6.5	81	79.389	ENSCVAG00000023000	si:ch211-275j6.5	77	79.389	Cyprinodon_variegatus
ENSSDUG00000020401	si:ch211-275j6.5	80	69.600	ENSDARG00000097803	si:ch211-275j6.5	90	69.600	Danio_rerio
ENSSDUG00000020401	si:ch211-275j6.5	56	63.636	ENSDNOG00000034728	C12orf65	76	55.556	Dasypus_novemcinctus
ENSSDUG00000020401	si:ch211-275j6.5	68	58.182	ENSDORG00000026069	2810006K23Rik	76	57.143	Dipodomys_ordii
ENSSDUG00000020401	si:ch211-275j6.5	73	46.552	FBgn0050100	CG30100	79	46.552	Drosophila_melanogaster
ENSSDUG00000020401	si:ch211-275j6.5	54	73.810	ENSEASG00005012587	C12orf65	84	58.993	Equus_asinus_asinus
ENSSDUG00000020401	si:ch211-275j6.5	53	74.699	ENSECAG00000001057	C8H12orf65	84	58.993	Equus_caballus
ENSSDUG00000020401	si:ch211-275j6.5	73	57.724	ENSEEUG00000007231	C12orf65	92	54.902	Erinaceus_europaeus
ENSSDUG00000020401	si:ch211-275j6.5	80	78.400	ENSELUG00000015178	lg13h12orf65	75	78.400	Esox_lucius
ENSSDUG00000020401	si:ch211-275j6.5	64	73.000	ENSFALG00000009261	C12orf65	79	64.567	Ficedula_albicollis
ENSSDUG00000020401	si:ch211-275j6.5	87	79.137	ENSFHEG00000017567	si:ch211-275j6.5	82	79.137	Fundulus_heteroclitus
ENSSDUG00000020401	si:ch211-275j6.5	89	67.133	ENSGMOG00000012139	si:ch211-275j6.5	97	67.133	Gadus_morhua
ENSSDUG00000020401	si:ch211-275j6.5	73	67.544	ENSGALG00000029390	C15H12ORF65	70	67.544	Gallus_gallus
ENSSDUG00000020401	si:ch211-275j6.5	87	77.372	ENSGACG00000008255	si:ch211-275j6.5	86	77.372	Gasterosteus_aculeatus
ENSSDUG00000020401	si:ch211-275j6.5	60	68.085	ENSGAGG00000000823	C12orf65	71	64.545	Gopherus_agassizii
ENSSDUG00000020401	si:ch211-275j6.5	84	55.714	ENSGGOG00000012850	C12orf65	92	55.921	Gorilla_gorilla
ENSSDUG00000020401	si:ch211-275j6.5	82	89.147	ENSHBUG00000007273	si:ch211-275j6.5	80	89.147	Haplochromis_burtoni
ENSSDUG00000020401	si:ch211-275j6.5	53	72.289	ENSHGLG00000010966	C12orf65	61	66.667	Heterocephalus_glaber_female
ENSSDUG00000020401	si:ch211-275j6.5	53	72.289	ENSHGLG00100018631	C12orf65	61	66.667	Heterocephalus_glaber_male
ENSSDUG00000020401	si:ch211-275j6.5	81	74.016	ENSHCOG00000019848	si:ch211-275j6.5	75	74.016	Hippocampus_comes
ENSSDUG00000020401	si:ch211-275j6.5	78	71.545	ENSIPUG00000020793	si:ch211-275j6.5	74	71.545	Ictalurus_punctatus
ENSSDUG00000020401	si:ch211-275j6.5	75	59.504	ENSSTOG00000016463	C12orf65	76	58.647	Ictidomys_tridecemlineatus
ENSSDUG00000020401	si:ch211-275j6.5	84	57.037	ENSJJAG00000023360	2810006K23Rik	73	57.037	Jaculus_jaculus
ENSSDUG00000020401	si:ch211-275j6.5	78	82.927	ENSKMAG00000018733	si:ch211-275j6.5	75	82.927	Kryptolebias_marmoratus
ENSSDUG00000020401	si:ch211-275j6.5	72	72.566	ENSLACG00000017355	C12orf65	68	72.566	Latimeria_chalumnae
ENSSDUG00000020401	si:ch211-275j6.5	73	71.304	ENSLOCG00000005702	si:ch211-275j6.5	95	71.304	Lepisosteus_oculatus
ENSSDUG00000020401	si:ch211-275j6.5	72	66.372	ENSLAFG00000002134	C12orf65	68	66.372	Loxodonta_africana
ENSSDUG00000020401	si:ch211-275j6.5	82	57.252	ENSMMUG00000031495	C12orf65	83	59.124	Macaca_mulatta
ENSSDUG00000020401	si:ch211-275j6.5	70	59.292	ENSMNEG00000044673	C12orf65	83	59.854	Macaca_nemestrina
ENSSDUG00000020401	si:ch211-275j6.5	82	57.252	ENSMLEG00000044309	C12orf65	83	59.124	Mandrillus_leucophaeus
ENSSDUG00000020401	si:ch211-275j6.5	89	71.006	ENSMAMG00000017366	si:ch211-275j6.5	100	71.006	Mastacembelus_armatus
ENSSDUG00000020401	si:ch211-275j6.5	82	89.147	ENSMZEG00005000938	si:ch211-275j6.5	79	89.147	Maylandia_zebra
ENSSDUG00000020401	si:ch211-275j6.5	80	63.200	ENSMGAG00000003354	C12orf65	92	63.200	Meleagris_gallopavo
ENSSDUG00000020401	si:ch211-275j6.5	60	62.887	ENSMAUG00000010304	2810006K23Rik	78	62.887	Mesocricetus_auratus
ENSSDUG00000020401	si:ch211-275j6.5	68	59.091	ENSMICG00000037138	C12orf65	84	57.554	Microcebus_murinus
ENSSDUG00000020401	si:ch211-275j6.5	64	63.107	ENSMOCG00000017477	2810006K23Rik	78	56.250	Microtus_ochrogaster
ENSSDUG00000020401	si:ch211-275j6.5	89	66.071	ENSMMOG00000017134	si:ch211-275j6.5	100	66.071	Mola_mola
ENSSDUG00000020401	si:ch211-275j6.5	90	55.862	ENSMODG00000012450	C12orf65	84	55.862	Monodelphis_domestica
ENSSDUG00000020401	si:ch211-275j6.5	89	72.189	ENSMALG00000012291	si:ch211-275j6.5	100	72.189	Monopterus_albus
ENSSDUG00000020401	si:ch211-275j6.5	59	65.625	MGP_CAROLIEiJ_G0027747	2810006K23Rik	71	60.305	Mus_caroli
ENSSDUG00000020401	si:ch211-275j6.5	67	60.185	ENSMUSG00000047635	2810006K23Rik	78	56.643	Mus_musculus
ENSSDUG00000020401	si:ch211-275j6.5	67	59.259	MGP_SPRETEiJ_G0028745	2810006K23Rik	78	55.944	Mus_spretus
ENSSDUG00000020401	si:ch211-275j6.5	77	52.143	ENSMPUG00000001679	C12orf65	87	52.632	Mustela_putorius_furo
ENSSDUG00000020401	si:ch211-275j6.5	73	60.526	ENSMLUG00000007001	C12orf65	69	60.526	Myotis_lucifugus
ENSSDUG00000020401	si:ch211-275j6.5	71	66.964	ENSNGAG00000010625	2810006K23Rik	63	66.372	Nannospalax_galili
ENSSDUG00000020401	si:ch211-275j6.5	82	88.372	ENSNBRG00000008082	si:ch211-275j6.5	80	88.372	Neolamprologus_brichardi
ENSSDUG00000020401	si:ch211-275j6.5	84	55.714	ENSNLEG00000001470	C12orf65	92	55.921	Nomascus_leucogenys
ENSSDUG00000020401	si:ch211-275j6.5	73	65.789	ENSMEUG00000009430	C12orf65	91	56.643	Notamacropus_eugenii
ENSSDUG00000020401	si:ch211-275j6.5	91	53.103	ENSOPRG00000011029	C12orf65	90	53.103	Ochotona_princeps
ENSSDUG00000020401	si:ch211-275j6.5	80	59.200	ENSODEG00000011382	-	72	59.200	Octodon_degus
ENSSDUG00000020401	si:ch211-275j6.5	85	84.211	ENSONIG00000013298	si:ch211-275j6.5	78	84.211	Oreochromis_niloticus
ENSSDUG00000020401	si:ch211-275j6.5	89	57.343	ENSOANG00000012866	C12orf65	83	57.343	Ornithorhynchus_anatinus
ENSSDUG00000020401	si:ch211-275j6.5	57	67.778	ENSOCUG00000011888	C12orf65	63	67.778	Oryctolagus_cuniculus
ENSSDUG00000020401	si:ch211-275j6.5	94	73.377	ENSORLG00000006153	si:ch211-275j6.5	92	73.377	Oryzias_latipes
ENSSDUG00000020401	si:ch211-275j6.5	94	72.727	ENSORLG00020017188	si:ch211-275j6.5	92	72.727	Oryzias_latipes_hni
ENSSDUG00000020401	si:ch211-275j6.5	94	73.377	ENSORLG00015005780	c9h12orf65	92	73.377	Oryzias_latipes_hsok
ENSSDUG00000020401	si:ch211-275j6.5	85	78.519	ENSOMEG00000001663	si:ch211-275j6.5	80	78.519	Oryzias_melastigma
ENSSDUG00000020401	si:ch211-275j6.5	71	55.263	ENSOGAG00000010778	C12orf65	88	54.545	Otolemur_garnettii
ENSSDUG00000020401	si:ch211-275j6.5	73	66.667	ENSOARG00000005214	C12orf65	67	66.667	Ovis_aries
ENSSDUG00000020401	si:ch211-275j6.5	84	55.714	ENSPPAG00000029654	C12orf65	92	55.921	Pan_paniscus
ENSSDUG00000020401	si:ch211-275j6.5	68	69.811	ENSPPRG00000024772	C12orf65	63	69.811	Panthera_pardus
ENSSDUG00000020401	si:ch211-275j6.5	68	69.811	ENSPTIG00000011744	C12orf65	63	69.811	Panthera_tigris_altaica
ENSSDUG00000020401	si:ch211-275j6.5	84	56.429	ENSPTRG00000005595	C12H12orf65	92	56.579	Pan_troglodytes
ENSSDUG00000020401	si:ch211-275j6.5	82	57.252	ENSPANG00000015388	C12orf65	83	59.124	Papio_anubis
ENSSDUG00000020401	si:ch211-275j6.5	80	73.016	ENSPKIG00000001571	si:ch211-275j6.5	75	73.016	Paramormyrops_kingsleyae
ENSSDUG00000020401	si:ch211-275j6.5	83	63.846	ENSPSIG00000013010	C12orf65	94	52.976	Pelodiscus_sinensis
ENSSDUG00000020401	si:ch211-275j6.5	78	75.410	ENSPMGG00000018342	si:ch211-275j6.5	72	75.410	Periophthalmus_magnuspinnatus
ENSSDUG00000020401	si:ch211-275j6.5	71	57.658	ENSPMAG00000000514	si:ch211-275j6.5	100	57.658	Petromyzon_marinus
ENSSDUG00000020401	si:ch211-275j6.5	88	57.447	ENSPCIG00000010996	C12orf65	84	55.862	Phascolarctos_cinereus
ENSSDUG00000020401	si:ch211-275j6.5	91	72.848	ENSPLAG00000001661	si:ch211-275j6.5	89	72.848	Poecilia_latipinna
ENSSDUG00000020401	si:ch211-275j6.5	94	75.000	ENSPMEG00000009201	si:ch211-275j6.5	90	75.000	Poecilia_mexicana
ENSSDUG00000020401	si:ch211-275j6.5	94	75.000	ENSPMEG00000018566	si:ch211-275j6.5	90	75.000	Poecilia_mexicana
ENSSDUG00000020401	si:ch211-275j6.5	80	83.333	ENSPREG00000021268	si:ch211-275j6.5	82	78.417	Poecilia_reticulata
ENSSDUG00000020401	si:ch211-275j6.5	84	55.714	ENSPPYG00000005082	C12orf65	92	55.921	Pongo_abelii
ENSSDUG00000020401	si:ch211-275j6.5	71	56.140	ENSPCAG00000016193	C12orf65	86	56.643	Procavia_capensis
ENSSDUG00000020401	si:ch211-275j6.5	68	60.000	ENSPCOG00000021574	C12orf65	78	58.273	Propithecus_coquereli
ENSSDUG00000020401	si:ch211-275j6.5	73	64.912	ENSPVAG00000015301	C12orf65	87	55.172	Pteropus_vampyrus
ENSSDUG00000020401	si:ch211-275j6.5	82	89.147	ENSPNYG00000014456	si:ch211-275j6.5	80	89.147	Pundamilia_nyererei
ENSSDUG00000020401	si:ch211-275j6.5	86	69.118	ENSPNAG00000019769	si:ch211-275j6.5	80	69.118	Pygocentrus_nattereri
ENSSDUG00000020401	si:ch211-275j6.5	59	66.667	ENSRNOG00000001073	RGD1563482	70	63.492	Rattus_norvegicus
ENSSDUG00000020401	si:ch211-275j6.5	78	59.200	ENSRBIG00000040789	C12orf65	83	59.124	Rhinopithecus_bieti
ENSSDUG00000020401	si:ch211-275j6.5	78	58.400	ENSRROG00000031384	C12orf65	81	58.394	Rhinopithecus_roxellana
ENSSDUG00000020401	si:ch211-275j6.5	70	60.177	ENSSBOG00000026629	C12orf65	92	55.128	Saimiri_boliviensis_boliviensis
ENSSDUG00000020401	si:ch211-275j6.5	90	57.639	ENSSHAG00000014988	C12orf65	80	55.862	Sarcophilus_harrisii
ENSSDUG00000020401	si:ch211-275j6.5	80	73.810	ENSSFOG00015019122	si:ch211-275j6.5	72	73.810	Scleropages_formosus
ENSSDUG00000020401	si:ch211-275j6.5	98	81.935	ENSSMAG00000016770	si:ch211-275j6.5	88	81.935	Scophthalmus_maximus
ENSSDUG00000020401	si:ch211-275j6.5	89	79.882	ENSSLDG00000017638	si:ch211-275j6.5	100	79.882	Seriola_lalandi_dorsalis
ENSSDUG00000020401	si:ch211-275j6.5	76	69.748	ENSSPUG00000012613	C12orf65	73	69.748	Sphenodon_punctatus
ENSSDUG00000020401	si:ch211-275j6.5	84	83.459	ENSSPAG00000023476	si:ch211-275j6.5	79	83.459	Stegastes_partitus
ENSSDUG00000020401	si:ch211-275j6.5	64	65.347	ENSSSCG00000009774	C12orf65	68	65.347	Sus_scrofa
ENSSDUG00000020401	si:ch211-275j6.5	75	65.812	ENSTGUG00000005440	C12orf65	91	65.812	Taeniopygia_guttata
ENSSDUG00000020401	si:ch211-275j6.5	85	81.203	ENSTNIG00000015832	si:ch211-275j6.5	79	81.203	Tetraodon_nigroviridis
ENSSDUG00000020401	si:ch211-275j6.5	64	64.078	ENSTBEG00000012500	C12orf65	82	59.559	Tupaia_belangeri
ENSSDUG00000020401	si:ch211-275j6.5	65	67.647	ENSTTRG00000015880	C12orf65	73	61.475	Tursiops_truncatus
ENSSDUG00000020401	si:ch211-275j6.5	54	71.429	ENSUAMG00000019669	C12orf65	73	63.333	Ursus_americanus
ENSSDUG00000020401	si:ch211-275j6.5	54	71.429	ENSUMAG00000004025	C12orf65	73	63.333	Ursus_maritimus
ENSSDUG00000020401	si:ch211-275j6.5	65	67.647	ENSVVUG00000027811	C12orf65	69	66.667	Vulpes_vulpes
ENSSDUG00000020401	si:ch211-275j6.5	90	77.083	ENSXCOG00000000975	si:ch211-275j6.5	82	79.856	Xiphophorus_couchianus