EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000020424 (Gene tree)
Gene ID: 111233689
Gene Symbol: si:dkey-17e16.10
Alias: -
Full Name: mitochondrial ribosomal protein S12
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3339 bases
Position: chrBDQW01000415.1:270198-273536
Accession: 111233689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000028278	Ribosom_S12_S23	PF00164.25	6.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000028769	-	2205	XM_022761564	ENSSDUP00000028278	145 (aa)	XP_022617285	UPI000BBE23DE

Gene Model

Click here to download ENSSDUG00000020424's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020424's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020424	si:dkey-17e16.10	76	76.364	ENSG00000128626	MRPS12	80	76.364	Homo_sapiens
ENSSDUG00000020424	si:dkey-17e16.10	99	93.007	ENSAPOG00000005047	si:dkey-17e16.10	100	93.007	Acanthochromis_polyacanthus
ENSSDUG00000020424	si:dkey-17e16.10	78	77.876	ENSAMEG00000008722	MRPS12	81	77.876	Ailuropoda_melanoleuca
ENSSDUG00000020424	si:dkey-17e16.10	99	93.007	ENSACIG00000016095	si:dkey-17e16.10	100	93.007	Amphilophus_citrinellus
ENSSDUG00000020424	si:dkey-17e16.10	99	95.804	ENSAOCG00000018530	si:dkey-17e16.10	100	95.804	Amphiprion_ocellaris
ENSSDUG00000020424	si:dkey-17e16.10	99	94.406	ENSAPEG00000019785	si:dkey-17e16.10	100	94.406	Amphiprion_percula
ENSSDUG00000020424	si:dkey-17e16.10	99	92.308	ENSATEG00000018924	si:dkey-17e16.10	100	92.308	Anabas_testudineus
ENSSDUG00000020424	si:dkey-17e16.10	75	72.477	ENSAPLG00000014350	-	73	72.477	Anas_platyrhynchos
ENSSDUG00000020424	si:dkey-17e16.10	76	80.000	ENSAPLG00000011925	-	79	80.000	Anas_platyrhynchos
ENSSDUG00000020424	si:dkey-17e16.10	76	82.727	ENSACAG00000003829	MRPS12	76	82.727	Anolis_carolinensis
ENSSDUG00000020424	si:dkey-17e16.10	77	77.477	ENSANAG00000033654	MRPS12	80	77.477	Aotus_nancymaae
ENSSDUG00000020424	si:dkey-17e16.10	99	93.706	ENSACLG00000013979	si:dkey-17e16.10	95	93.706	Astatotilapia_calliptera
ENSSDUG00000020424	si:dkey-17e16.10	99	72.603	ENSAMXG00000025945	si:dkey-17e16.10	100	72.603	Astyanax_mexicanus
ENSSDUG00000020424	si:dkey-17e16.10	80	76.724	ENSBTAG00000001782	MRPS12	83	76.724	Bos_taurus
ENSSDUG00000020424	si:dkey-17e16.10	67	56.566	WBGene00011391	mrps-12	63	56.566	Caenorhabditis_elegans
ENSSDUG00000020424	si:dkey-17e16.10	77	77.477	ENSCJAG00000043176	MRPS12	80	77.477	Callithrix_jacchus
ENSSDUG00000020424	si:dkey-17e16.10	95	70.213	ENSCAFG00000005623	MRPS12	99	70.213	Canis_familiaris
ENSSDUG00000020424	si:dkey-17e16.10	95	70.213	ENSCAFG00020016784	MRPS12	99	70.213	Canis_lupus_dingo
ENSSDUG00000020424	si:dkey-17e16.10	80	76.724	ENSCHIG00000013852	MRPS12	83	76.724	Capra_hircus
ENSSDUG00000020424	si:dkey-17e16.10	77	79.464	ENSTSYG00000009568	MRPS12	81	79.464	Carlito_syrichta
ENSSDUG00000020424	si:dkey-17e16.10	78	77.876	ENSCAPG00000009543	MRPS12	83	77.876	Cavia_aperea
ENSSDUG00000020424	si:dkey-17e16.10	78	77.876	ENSCPOG00000035217	MRPS12	81	77.876	Cavia_porcellus
ENSSDUG00000020424	si:dkey-17e16.10	76	76.364	ENSCCAG00000035388	MRPS12	80	76.364	Cebus_capucinus
ENSSDUG00000020424	si:dkey-17e16.10	77	76.577	ENSCATG00000038438	MRPS12	80	76.577	Cercocebus_atys
ENSSDUG00000020424	si:dkey-17e16.10	77	77.679	ENSCLAG00000013286	MRPS12	81	77.679	Chinchilla_lanigera
ENSSDUG00000020424	si:dkey-17e16.10	76	77.273	ENSCSAG00000003929	MRPS12	79	77.273	Chlorocebus_sabaeus
ENSSDUG00000020424	si:dkey-17e16.10	58	84.524	ENSCHOG00000008451	MRPS12	60	84.524	Choloepus_hoffmanni
ENSSDUG00000020424	si:dkey-17e16.10	81	79.487	ENSCPBG00000018941	MRPS12	75	79.487	Chrysemys_picta_bellii
ENSSDUG00000020424	si:dkey-17e16.10	58	67.857	ENSCING00000014236	-	70	49.630	Ciona_intestinalis
ENSSDUG00000020424	si:dkey-17e16.10	68	59.596	ENSCSAVG00000008777	-	52	59.596	Ciona_savignyi
ENSSDUG00000020424	si:dkey-17e16.10	77	76.577	ENSCANG00000003652	MRPS12	80	76.577	Colobus_angolensis_palliatus
ENSSDUG00000020424	si:dkey-17e16.10	81	74.790	ENSCGRG00001018968	Mrps12	86	74.790	Cricetulus_griseus_chok1gshd
ENSSDUG00000020424	si:dkey-17e16.10	81	74.790	ENSCGRG00000007113	Mrps12	86	74.790	Cricetulus_griseus_crigri
ENSSDUG00000020424	si:dkey-17e16.10	98	86.620	ENSCSEG00000001174	si:dkey-17e16.10	99	86.620	Cynoglossus_semilaevis
ENSSDUG00000020424	si:dkey-17e16.10	99	91.608	ENSCVAG00000003253	si:dkey-17e16.10	100	91.608	Cyprinodon_variegatus
ENSSDUG00000020424	si:dkey-17e16.10	99	77.622	ENSDARG00000089836	MRPS12	100	77.622	Danio_rerio
ENSSDUG00000020424	si:dkey-17e16.10	88	72.308	ENSDNOG00000003918	MRPS12	94	72.308	Dasypus_novemcinctus
ENSSDUG00000020424	si:dkey-17e16.10	79	75.439	ENSDORG00000001544	Mrps12	82	75.439	Dipodomys_ordii
ENSSDUG00000020424	si:dkey-17e16.10	77	62.281	FBgn0003714	tko	79	62.281	Drosophila_melanogaster
ENSSDUG00000020424	si:dkey-17e16.10	78	79.646	ENSETEG00000017985	MRPS12	81	79.646	Echinops_telfairi
ENSSDUG00000020424	si:dkey-17e16.10	77	82.143	ENSEBUG00000003529	si:dkey-17e16.10	64	82.143	Eptatretus_burgeri
ENSSDUG00000020424	si:dkey-17e16.10	95	70.213	ENSEASG00005019736	MRPS12	99	70.213	Equus_asinus_asinus
ENSSDUG00000020424	si:dkey-17e16.10	95	70.213	ENSECAG00000013794	MRPS12	99	70.213	Equus_caballus
ENSSDUG00000020424	si:dkey-17e16.10	99	87.413	ENSELUG00000014973	si:dkey-17e16.10	99	87.413	Esox_lucius
ENSSDUG00000020424	si:dkey-17e16.10	78	76.991	ENSFCAG00000014573	MRPS12	81	76.991	Felis_catus
ENSSDUG00000020424	si:dkey-17e16.10	75	74.312	ENSFALG00000015276	MRPS12	95	74.312	Ficedula_albicollis
ENSSDUG00000020424	si:dkey-17e16.10	99	67.586	ENSFDAG00000008482	MRPS12	100	67.586	Fukomys_damarensis
ENSSDUG00000020424	si:dkey-17e16.10	99	90.210	ENSFHEG00000004575	si:dkey-17e16.10	100	90.210	Fundulus_heteroclitus
ENSSDUG00000020424	si:dkey-17e16.10	77	94.595	ENSGMOG00000020611	si:dkey-17e16.10	100	94.595	Gadus_morhua
ENSSDUG00000020424	si:dkey-17e16.10	90	70.896	ENSGALG00000038667	MRPS12	99	70.677	Gallus_gallus
ENSSDUG00000020424	si:dkey-17e16.10	97	88.652	ENSGAFG00000007521	si:dkey-17e16.10	99	88.652	Gambusia_affinis
ENSSDUG00000020424	si:dkey-17e16.10	99	74.825	ENSGACG00000003011	si:dkey-17e16.10	100	92.793	Gasterosteus_aculeatus
ENSSDUG00000020424	si:dkey-17e16.10	80	81.034	ENSGAGG00000009748	MRPS12	74	81.034	Gopherus_agassizii
ENSSDUG00000020424	si:dkey-17e16.10	76	76.364	ENSGGOG00000002500	MRPS12	80	76.364	Gorilla_gorilla
ENSSDUG00000020424	si:dkey-17e16.10	99	93.007	ENSHBUG00000014480	si:dkey-17e16.10	100	93.007	Haplochromis_burtoni
ENSSDUG00000020424	si:dkey-17e16.10	78	74.336	ENSHGLG00000014942	MRPS12	81	74.336	Heterocephalus_glaber_female
ENSSDUG00000020424	si:dkey-17e16.10	78	74.336	ENSHGLG00100017710	MRPS12	81	74.336	Heterocephalus_glaber_male
ENSSDUG00000020424	si:dkey-17e16.10	99	80.000	ENSHCOG00000010444	si:dkey-17e16.10	97	80.000	Hippocampus_comes
ENSSDUG00000020424	si:dkey-17e16.10	99	85.315	ENSIPUG00000024651	MRPS12	100	85.315	Ictalurus_punctatus
ENSSDUG00000020424	si:dkey-17e16.10	78	78.761	ENSSTOG00000009006	MRPS12	81	78.761	Ictidomys_tridecemlineatus
ENSSDUG00000020424	si:dkey-17e16.10	78	75.221	ENSJJAG00000017837	Mrps12	81	75.221	Jaculus_jaculus
ENSSDUG00000020424	si:dkey-17e16.10	99	90.210	ENSKMAG00000007949	si:dkey-17e16.10	91	90.210	Kryptolebias_marmoratus
ENSSDUG00000020424	si:dkey-17e16.10	83	91.736	ENSLBEG00000001112	si:dkey-17e16.10	86	91.736	Labrus_bergylta
ENSSDUG00000020424	si:dkey-17e16.10	78	85.841	ENSLACG00000018393	MRPS12	71	85.841	Latimeria_chalumnae
ENSSDUG00000020424	si:dkey-17e16.10	99	71.429	ENSLOCG00000000535	si:dkey-17e16.10	100	71.429	Lepisosteus_oculatus
ENSSDUG00000020424	si:dkey-17e16.10	78	74.336	ENSLAFG00000022140	MRPS12	81	74.336	Loxodonta_africana
ENSSDUG00000020424	si:dkey-17e16.10	77	77.477	ENSMFAG00000044563	MRPS12	80	77.477	Macaca_fascicularis
ENSSDUG00000020424	si:dkey-17e16.10	77	76.577	ENSMNEG00000040379	MRPS12	80	76.577	Macaca_nemestrina
ENSSDUG00000020424	si:dkey-17e16.10	77	76.577	ENSMLEG00000036963	MRPS12	80	76.577	Mandrillus_leucophaeus
ENSSDUG00000020424	si:dkey-17e16.10	99	89.510	ENSMAMG00000017962	si:dkey-17e16.10	100	89.510	Mastacembelus_armatus
ENSSDUG00000020424	si:dkey-17e16.10	99	93.706	ENSMZEG00005017336	si:dkey-17e16.10	100	93.706	Maylandia_zebra
ENSSDUG00000020424	si:dkey-17e16.10	77	80.180	ENSMGAG00000005414	MRPS12	78	80.180	Meleagris_gallopavo
ENSSDUG00000020424	si:dkey-17e16.10	56	74.699	ENSMAUG00000019146	Mrps12	81	74.699	Mesocricetus_auratus
ENSSDUG00000020424	si:dkey-17e16.10	78	77.876	ENSMICG00000045111	MRPS12	81	77.876	Microcebus_murinus
ENSSDUG00000020424	si:dkey-17e16.10	97	68.531	ENSMOCG00000012666	Mrps12	100	68.531	Microtus_ochrogaster
ENSSDUG00000020424	si:dkey-17e16.10	77	92.857	ENSMMOG00000010803	si:dkey-17e16.10	77	92.857	Mola_mola
ENSSDUG00000020424	si:dkey-17e16.10	94	67.391	ENSMODG00000013431	MRPS12	92	67.391	Monodelphis_domestica
ENSSDUG00000020424	si:dkey-17e16.10	98	92.254	ENSMALG00000004190	si:dkey-17e16.10	99	92.254	Monopterus_albus
ENSSDUG00000020424	si:dkey-17e16.10	78	77.876	MGP_CAROLIEiJ_G0029457	Mrps12	85	78.302	Mus_caroli
ENSSDUG00000020424	si:dkey-17e16.10	78	77.876	ENSMUSG00000045948	Mrps12	85	78.302	Mus_musculus
ENSSDUG00000020424	si:dkey-17e16.10	78	76.991	MGP_PahariEiJ_G0012691	Mrps12	85	77.358	Mus_pahari
ENSSDUG00000020424	si:dkey-17e16.10	78	77.876	MGP_SPRETEiJ_G0030553	Mrps12	85	78.302	Mus_spretus
ENSSDUG00000020424	si:dkey-17e16.10	79	78.261	ENSMPUG00000017750	MRPS12	86	78.261	Mustela_putorius_furo
ENSSDUG00000020424	si:dkey-17e16.10	78	77.876	ENSMLUG00000006076	MRPS12	81	77.876	Myotis_lucifugus
ENSSDUG00000020424	si:dkey-17e16.10	78	78.761	ENSNGAG00000022099	Mrps12	81	78.761	Nannospalax_galili
ENSSDUG00000020424	si:dkey-17e16.10	99	93.706	ENSNBRG00000007244	si:dkey-17e16.10	100	93.706	Neolamprologus_brichardi
ENSSDUG00000020424	si:dkey-17e16.10	77	73.874	ENSMEUG00000005688	MRPS12	99	73.874	Notamacropus_eugenii
ENSSDUG00000020424	si:dkey-17e16.10	99	68.276	ENSODEG00000016161	MRPS12	100	68.276	Octodon_degus
ENSSDUG00000020424	si:dkey-17e16.10	99	91.608	ENSONIG00000002022	si:dkey-17e16.10	100	91.608	Oreochromis_niloticus
ENSSDUG00000020424	si:dkey-17e16.10	77	78.571	ENSOCUG00000000689	MRPS12	81	78.571	Oryctolagus_cuniculus
ENSSDUG00000020424	si:dkey-17e16.10	99	88.811	ENSORLG00000007040	si:dkey-17e16.10	100	88.811	Oryzias_latipes
ENSSDUG00000020424	si:dkey-17e16.10	99	88.811	ENSORLG00020011268	MRPS12	100	88.811	Oryzias_latipes_hni
ENSSDUG00000020424	si:dkey-17e16.10	99	88.811	ENSORLG00015009378	MRPS12	100	88.811	Oryzias_latipes_hsok
ENSSDUG00000020424	si:dkey-17e16.10	99	89.510	ENSOMEG00000001427	si:dkey-17e16.10	100	89.510	Oryzias_melastigma
ENSSDUG00000020424	si:dkey-17e16.10	78	78.761	ENSOGAG00000008295	-	81	78.761	Otolemur_garnettii
ENSSDUG00000020424	si:dkey-17e16.10	78	70.796	ENSOGAG00000025634	-	81	70.796	Otolemur_garnettii
ENSSDUG00000020424	si:dkey-17e16.10	80	76.724	ENSOARG00000005927	MRPS12	83	76.724	Ovis_aries
ENSSDUG00000020424	si:dkey-17e16.10	76	76.364	ENSPPAG00000041637	MRPS12	80	76.364	Pan_paniscus
ENSSDUG00000020424	si:dkey-17e16.10	78	76.991	ENSPPRG00000011742	MRPS12	81	76.991	Panthera_pardus
ENSSDUG00000020424	si:dkey-17e16.10	61	81.818	ENSPTIG00000008427	MRPS12	99	66.667	Panthera_tigris_altaica
ENSSDUG00000020424	si:dkey-17e16.10	76	76.364	ENSPTRG00000010948	MRPS12	80	76.364	Pan_troglodytes
ENSSDUG00000020424	si:dkey-17e16.10	77	76.577	ENSPANG00000021673	MRPS12	80	76.577	Papio_anubis
ENSSDUG00000020424	si:dkey-17e16.10	99	77.622	ENSPKIG00000006716	si:dkey-17e16.10	100	77.622	Paramormyrops_kingsleyae
ENSSDUG00000020424	si:dkey-17e16.10	81	81.197	ENSPSIG00000014383	MRPS12	90	70.290	Pelodiscus_sinensis
ENSSDUG00000020424	si:dkey-17e16.10	98	80.420	ENSPMGG00000009631	si:dkey-17e16.10	99	80.420	Periophthalmus_magnuspinnatus
ENSSDUG00000020424	si:dkey-17e16.10	92	70.588	ENSPEMG00000016700	Mrps12	98	70.588	Peromyscus_maniculatus_bairdii
ENSSDUG00000020424	si:dkey-17e16.10	94	63.121	ENSPMAG00000008051	si:dkey-17e16.10	91	63.121	Petromyzon_marinus
ENSSDUG00000020424	si:dkey-17e16.10	76	77.273	ENSPCIG00000010531	-	78	77.273	Phascolarctos_cinereus
ENSSDUG00000020424	si:dkey-17e16.10	98	88.028	ENSPFOG00000018863	si:dkey-17e16.10	99	88.028	Poecilia_formosa
ENSSDUG00000020424	si:dkey-17e16.10	98	88.028	ENSPLAG00000008933	si:dkey-17e16.10	99	88.028	Poecilia_latipinna
ENSSDUG00000020424	si:dkey-17e16.10	98	87.324	ENSPMEG00000005155	si:dkey-17e16.10	95	87.324	Poecilia_mexicana
ENSSDUG00000020424	si:dkey-17e16.10	97	87.143	ENSPREG00000014123	si:dkey-17e16.10	95	87.143	Poecilia_reticulata
ENSSDUG00000020424	si:dkey-17e16.10	76	76.364	ENSPPYG00000009950	MRPS12	80	76.364	Pongo_abelii
ENSSDUG00000020424	si:dkey-17e16.10	96	66.901	ENSPCAG00000010853	MRPS12	100	66.901	Procavia_capensis
ENSSDUG00000020424	si:dkey-17e16.10	78	77.876	ENSPCOG00000020370	MRPS12	81	77.876	Propithecus_coquereli
ENSSDUG00000020424	si:dkey-17e16.10	95	67.606	ENSPVAG00000011605	MRPS12	99	67.606	Pteropus_vampyrus
ENSSDUG00000020424	si:dkey-17e16.10	99	93.706	ENSPNYG00000015506	si:dkey-17e16.10	95	93.706	Pundamilia_nyererei
ENSSDUG00000020424	si:dkey-17e16.10	78	87.611	ENSPNAG00000016315	si:dkey-17e16.10	76	87.611	Pygocentrus_nattereri
ENSSDUG00000020424	si:dkey-17e16.10	78	78.761	ENSRNOG00000019949	Mrps12	81	78.761	Rattus_norvegicus
ENSSDUG00000020424	si:dkey-17e16.10	77	76.577	ENSRBIG00000029741	MRPS12	80	76.577	Rhinopithecus_bieti
ENSSDUG00000020424	si:dkey-17e16.10	77	76.577	ENSRROG00000030787	MRPS12	80	76.577	Rhinopithecus_roxellana
ENSSDUG00000020424	si:dkey-17e16.10	77	77.477	ENSSBOG00000025707	MRPS12	80	77.477	Saimiri_boliviensis_boliviensis
ENSSDUG00000020424	si:dkey-17e16.10	99	73.427	ENSSFOG00015018102	mrps12	100	73.427	Scleropages_formosus
ENSSDUG00000020424	si:dkey-17e16.10	99	89.510	ENSSMAG00000004249	si:dkey-17e16.10	100	89.510	Scophthalmus_maximus
ENSSDUG00000020424	si:dkey-17e16.10	100	100.000	ENSSLDG00000016320	si:dkey-17e16.10	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000020424	si:dkey-17e16.10	80	76.724	ENSSARG00000006985	MRPS12	83	76.724	Sorex_araneus
ENSSDUG00000020424	si:dkey-17e16.10	93	70.714	ENSSPUG00000004675	MRPS12	91	70.714	Sphenodon_punctatus
ENSSDUG00000020424	si:dkey-17e16.10	99	92.308	ENSSPAG00000012951	si:dkey-17e16.10	100	92.308	Stegastes_partitus
ENSSDUG00000020424	si:dkey-17e16.10	80	77.586	ENSSSCG00000031860	MRPS12	91	77.586	Sus_scrofa
ENSSDUG00000020424	si:dkey-17e16.10	76	75.455	ENSTGUG00000016491	MRPS12	100	75.455	Taeniopygia_guttata
ENSSDUG00000020424	si:dkey-17e16.10	92	81.955	ENSTRUG00000017342	si:dkey-17e16.10	94	81.955	Takifugu_rubripes
ENSSDUG00000020424	si:dkey-17e16.10	91	84.848	ENSTNIG00000004898	si:dkey-17e16.10	96	84.848	Tetraodon_nigroviridis
ENSSDUG00000020424	si:dkey-17e16.10	78	77.876	ENSTBEG00000001288	MRPS12	81	77.876	Tupaia_belangeri
ENSSDUG00000020424	si:dkey-17e16.10	95	70.000	ENSTTRG00000011794	MRPS12	99	70.000	Tursiops_truncatus
ENSSDUG00000020424	si:dkey-17e16.10	78	76.106	ENSUAMG00000011626	MRPS12	81	76.106	Ursus_americanus
ENSSDUG00000020424	si:dkey-17e16.10	78	77.876	ENSUMAG00000019235	MRPS12	81	77.876	Ursus_maritimus
ENSSDUG00000020424	si:dkey-17e16.10	95	69.504	ENSVVUG00000006433	MRPS12	70	69.504	Vulpes_vulpes
ENSSDUG00000020424	si:dkey-17e16.10	80	81.034	ENSXETG00000005326	mrps12	78	81.034	Xenopus_tropicalis
ENSSDUG00000020424	si:dkey-17e16.10	97	87.943	ENSXCOG00000020766	si:dkey-17e16.10	95	87.943	Xiphophorus_couchianus
ENSSDUG00000020424	si:dkey-17e16.10	97	87.943	ENSXMAG00000027119	si:dkey-17e16.10	99	87.943	Xiphophorus_maculatus