EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000020458 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 2954 bases
Position: chrBDQW01000187.1:2257221-2260174
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000028342	Ribosomal_L29e	PF01779.17	8.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000028833	-	189	-	ENSSDUP00000028342	62 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000020458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020458's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000020458	-	76	65.957	ENSSDUG00000016140	rpl29	72	65.957

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020458	-	65	72.500	ENSG00000162244	RPL29	81	80.000	Homo_sapiens
ENSSDUG00000020458	-	56	77.143	ENSAPOG00000002586	rpl29	53	77.143	Acanthochromis_polyacanthus
ENSSDUG00000020458	-	76	65.957	ENSACIG00000018340	rpl29	72	65.957	Amphilophus_citrinellus
ENSSDUG00000020458	-	76	68.085	ENSAOCG00000016652	rpl29	72	68.085	Amphiprion_ocellaris
ENSSDUG00000020458	-	76	68.085	ENSAPEG00000005754	rpl29	72	68.085	Amphiprion_percula
ENSSDUG00000020458	-	56	80.000	ENSACAG00000006888	RPL29	71	65.957	Anolis_carolinensis
ENSSDUG00000020458	-	82	56.140	ENSANAG00000024147	-	93	56.140	Aotus_nancymaae
ENSSDUG00000020458	-	76	65.957	ENSACLG00000017820	rpl29	72	65.957	Astatotilapia_calliptera
ENSSDUG00000020458	-	76	63.830	ENSAMXG00000038794	rpl29	72	63.830	Astyanax_mexicanus
ENSSDUG00000020458	-	56	57.143	WBGene00004443	rpl-29	55	57.143	Caenorhabditis_elegans
ENSSDUG00000020458	-	82	56.140	ENSCJAG00000042339	-	93	56.140	Callithrix_jacchus
ENSSDUG00000020458	-	82	56.140	ENSCCAG00000027980	-	93	56.140	Cebus_capucinus
ENSSDUG00000020458	-	90	52.632	ENSCPBG00000016679	-	73	52.632	Chrysemys_picta_bellii
ENSSDUG00000020458	-	76	55.319	ENSCING00000018496	-	79	55.319	Ciona_intestinalis
ENSSDUG00000020458	-	56	62.857	ENSCSAVG00000005231	-	58	62.857	Ciona_savignyi
ENSSDUG00000020458	-	56	80.000	ENSCGRG00001016452	-	68	65.957	Cricetulus_griseus_chok1gshd
ENSSDUG00000020458	-	76	65.957	ENSCSEG00000010267	rpl29	70	65.957	Cynoglossus_semilaevis
ENSSDUG00000020458	-	76	65.957	ENSCVAG00000023098	rpl29	72	65.957	Cyprinodon_variegatus
ENSSDUG00000020458	-	76	65.957	ENSDARG00000077717	rpl29	72	65.957	Danio_rerio
ENSSDUG00000020458	-	71	56.522	ENSEASG00005005507	-	69	56.522	Equus_asinus_asinus
ENSSDUG00000020458	-	76	63.830	ENSELUG00000015592	RL29	66	63.830	Esox_lucius
ENSSDUG00000020458	-	56	74.286	ENSFALG00000008925	RPL29	68	61.702	Ficedula_albicollis
ENSSDUG00000020458	-	76	65.957	ENSFHEG00000015425	rpl29	72	65.957	Fundulus_heteroclitus
ENSSDUG00000020458	-	56	80.000	ENSGALG00000026978	RPL29	65	65.957	Gallus_gallus
ENSSDUG00000020458	-	76	65.957	ENSGAFG00000012868	rpl29	72	65.957	Gambusia_affinis
ENSSDUG00000020458	-	76	68.085	ENSGACG00000007041	rpl29	60	68.085	Gasterosteus_aculeatus
ENSSDUG00000020458	-	55	76.471	ENSGAGG00000024203	-	61	76.471	Gopherus_agassizii
ENSSDUG00000020458	-	82	57.895	ENSGGOG00000024691	RPL29	93	57.895	Gorilla_gorilla
ENSSDUG00000020458	-	76	65.957	ENSHBUG00000010519	rpl29	72	65.957	Haplochromis_burtoni
ENSSDUG00000020458	-	76	68.085	ENSHCOG00000000478	rpl29	59	68.085	Hippocampus_comes
ENSSDUG00000020458	-	76	65.957	ENSIPUG00000001196	rpl29	72	65.957	Ictalurus_punctatus
ENSSDUG00000020458	-	76	65.957	ENSKMAG00000011291	rpl29	72	65.957	Kryptolebias_marmoratus
ENSSDUG00000020458	-	76	63.830	ENSLBEG00000016213	rpl29	68	63.830	Labrus_bergylta
ENSSDUG00000020458	-	76	59.574	ENSLACG00000018622	rpl29	72	59.574	Latimeria_chalumnae
ENSSDUG00000020458	-	76	59.574	ENSLACG00000018031	-	68	59.574	Latimeria_chalumnae
ENSSDUG00000020458	-	56	80.000	ENSLOCG00000013798	rpl29	71	65.957	Lepisosteus_oculatus
ENSSDUG00000020458	-	76	65.957	ENSMZEG00005013519	rpl29	72	65.957	Maylandia_zebra
ENSSDUG00000020458	-	56	80.000	ENSMGAG00000001213	RPL29	65	65.957	Meleagris_gallopavo
ENSSDUG00000020458	-	56	77.143	ENSMICG00000049466	-	52	77.143	Microcebus_murinus
ENSSDUG00000020458	-	76	65.957	ENSMMOG00000010430	rpl29	72	65.957	Mola_mola
ENSSDUG00000020458	-	76	68.085	ENSMALG00000009023	rpl29	59	68.085	Monopterus_albus
ENSSDUG00000020458	-	56	80.000	ENSMUSG00000048758	Rpl29	68	65.957	Mus_musculus
ENSSDUG00000020458	-	76	65.957	ENSNBRG00000022109	rpl29	72	65.957	Neolamprologus_brichardi
ENSSDUG00000020458	-	76	65.957	ENSONIG00000014377	rpl29	73	65.957	Oreochromis_niloticus
ENSSDUG00000020458	-	76	68.085	ENSOMEG00000019919	rpl29	72	68.085	Oryzias_melastigma
ENSSDUG00000020458	-	82	58.929	ENSPPAG00000037142	-	93	58.929	Pan_paniscus
ENSSDUG00000020458	-	82	58.929	ENSPTRG00000043237	RPL29	93	58.929	Pan_troglodytes
ENSSDUG00000020458	-	56	80.000	ENSPKIG00000025048	rpl29	70	65.957	Paramormyrops_kingsleyae
ENSSDUG00000020458	-	56	80.000	ENSPSIG00000014699	RPL29	73	65.957	Pelodiscus_sinensis
ENSSDUG00000020458	-	76	61.702	ENSPMGG00000005361	rpl29	68	61.702	Periophthalmus_magnuspinnatus
ENSSDUG00000020458	-	76	65.957	ENSPFOG00000011385	rpl29	75	65.957	Poecilia_formosa
ENSSDUG00000020458	-	76	65.957	ENSPLAG00000012042	rpl29	72	65.957	Poecilia_latipinna
ENSSDUG00000020458	-	76	65.957	ENSPMEG00000018297	rpl29	72	65.957	Poecilia_mexicana
ENSSDUG00000020458	-	76	65.957	ENSPREG00000007066	rpl29	72	65.957	Poecilia_reticulata
ENSSDUG00000020458	-	76	65.957	ENSPNYG00000019481	rpl29	72	65.957	Pundamilia_nyererei
ENSSDUG00000020458	-	76	65.957	ENSPNAG00000007550	rpl29	72	65.957	Pygocentrus_nattereri
ENSSDUG00000020458	-	76	61.702	ENSRNOG00000025794	AABR07021239.1	61	61.702	Rattus_norvegicus
ENSSDUG00000020458	-	87	51.786	ENSRNOG00000051988	AC128582.1	54	51.786	Rattus_norvegicus
ENSSDUG00000020458	-	82	57.895	ENSRBIG00000030892	-	53	57.895	Rhinopithecus_bieti
ENSSDUG00000020458	-	56	68.571	YFR032C-A	RPL29	58	68.571	Saccharomyces_cerevisiae
ENSSDUG00000020458	-	76	68.085	ENSSMAG00000013571	rpl29	72	68.085	Scophthalmus_maximus
ENSSDUG00000020458	-	76	65.957	ENSSLDG00000003932	rpl29	72	65.957	Seriola_lalandi_dorsalis
ENSSDUG00000020458	-	56	80.000	ENSSPUG00000003760	RPL29	73	65.957	Sphenodon_punctatus
ENSSDUG00000020458	-	76	63.830	ENSSPAG00000020292	rpl29	72	63.830	Stegastes_partitus
ENSSDUG00000020458	-	56	74.286	ENSTGUG00000006027	RPL29	73	61.702	Taeniopygia_guttata
ENSSDUG00000020458	-	76	63.830	ENSTRUG00000022273	rpl29	71	63.830	Takifugu_rubripes
ENSSDUG00000020458	-	76	68.085	ENSTNIG00000014816	rpl29	68	68.085	Tetraodon_nigroviridis
ENSSDUG00000020458	-	56	80.000	ENSUAMG00000002601	-	60	80.000	Ursus_americanus
ENSSDUG00000020458	-	56	77.143	ENSVVUG00000012400	-	81	63.830	Vulpes_vulpes
ENSSDUG00000020458	-	56	80.000	ENSXETG00000010811	rpl29	61	65.957	Xenopus_tropicalis
ENSSDUG00000020458	-	76	65.957	ENSXCOG00000013543	rpl29	72	65.957	Xiphophorus_couchianus
ENSSDUG00000020458	-	76	65.957	ENSXMAG00000020948	rpl29	72	65.957	Xiphophorus_maculatus