EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000020466 (Gene tree)
Gene ID
111232989
Gene Symbol
polr2a
Alias
im:7136071
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Minus strand
Length
13476 bases
Position
chrBDQW01000362.1:476463-489938
Accession
111232989
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000028458RNA_pol_Rpb1_5PF04998.172e-10111
ENSSDUP00000028411RNA_pol_Rpb1_5PF04998.172.1e-10111
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-29131
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-29231
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-29331
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-29431
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-29531
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-29631
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-29731
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-29831
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-29931
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-291031
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-291131
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-291231
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-291331
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-291431
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-291531
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-291631
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-291731
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-291831
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-291931
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-292031
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-292131
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-292231
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-292331
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-292431
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-292531
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-292631
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-292731
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-292831
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-292931
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-293031
ENSSDUP00000028458RNA_pol_Rpb1_RPF05001.133.8e-293131
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-23132
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-23232
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-23332
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-23432
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-23532
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-23632
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-23732
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-23832
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-23932
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-231032
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-231132
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-231232
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-231332
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-231432
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-231532
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-231632
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-231732
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-231832
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-231932
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-232032
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-232132
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-232232
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-232332
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-232432
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-232532
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-232632
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-232732
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-232832
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-232932
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-233032
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-233132
ENSSDUP00000028411RNA_pol_Rpb1_RPF05001.131e-233232
ENSSDUP00000028458RNA_pol_Rpb1_4PF05000.171.2e-3711
ENSSDUP00000028411RNA_pol_Rpb1_4PF05000.171.2e-3711
ENSSDUP00000028458RNA_pol_Rpb1_2PF00623.205.8e-7511
ENSSDUP00000028411RNA_pol_Rpb1_2PF00623.206e-7511
ENSSDUP00000028458RNA_pol_Rpb1_3PF04983.182.8e-5011
ENSSDUP00000028411RNA_pol_Rpb1_3PF04983.182.9e-5011
ENSSDUP00000028458RNA_pol_Rpb1_1PF04997.125.9e-10911
ENSSDUP00000028411RNA_pol_Rpb1_1PF04997.126.1e-10911
ENSSDUP00000028411RNA_pol_Rpb1_7PF04990.122e-5511
ENSSDUP00000028458RNA_pol_Rpb1_7PF04990.126.2e-5511
ENSSDUP00000028458RNA_pol_Rpb1_6PF04992.141.3e-6611
ENSSDUP00000028411RNA_pol_Rpb1_6PF04992.141.4e-6611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000028902-8839XM_022760705ENSSDUP000000284111966 (aa)XP_022616426UPI000BBE4DD8
ENSSDUT00000028951-5787-ENSSDUP000000284581928 (aa)--
Gene Model
Click here to download ENSSDUG00000020466's gene model file
Pathways
Pathway IDPathway NameSource
sdu03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020466's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000020466polr2a6838.479ENSSDUG00000019840polr3a9138.479
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000020466polr2a8799.132ENSAPOG00000006552polr2a9099.132Acanthochromis_polyacanthus
ENSSDUG00000020466polr2a8294.052ENSAMEG00000016265-8294.059Ailuropoda_melanoleuca
ENSSDUG00000020466polr2a10098.807ENSACIG00000015982polr2a10098.807Amphilophus_citrinellus
ENSSDUG00000020466polr2a10097.146ENSAOCG00000004255polr2a10095.332Amphiprion_ocellaris
ENSSDUG00000020466polr2a10099.390ENSAPEG00000012623polr2a10099.390Amphiprion_percula
ENSSDUG00000020466polr2a10098.983ENSATEG00000019644polr2a10098.983Anabas_testudineus
ENSSDUG00000020466polr2a8295.031ENSACAG00000014561POLR2A8295.037Anolis_carolinensis
ENSSDUG00000020466polr2a8294.413ENSANAG00000020093-8294.603Aotus_nancymaae
ENSSDUG00000020466polr2a10098.779ENSACLG00000006735polr2a10098.779Astatotilapia_calliptera
ENSSDUG00000020466polr2a10097.977ENSAMXG00000020046polr2a10097.977Astyanax_mexicanus
ENSSDUG00000020466polr2a8294.413ENSBTAG00000046765POLR2A8294.420Bos_taurus
ENSSDUG00000020466polr2a9870.238WBGene00000123ama-19979.612Caenorhabditis_elegans
ENSSDUG00000020466polr2a8694.351ENSCAFG00000016532POLR2A9994.358Canis_familiaris
ENSSDUG00000020466polr2a8293.486ENSCAFG00020007929-8293.494Canis_lupus_dingo
ENSSDUG00000020466polr2a8294.413ENSCHIG00000027173-8294.420Capra_hircus
ENSSDUG00000020466polr2a9292.115ENSTSYG00000012803-8591.708Carlito_syrichta
ENSSDUG00000020466polr2a9890.939ENSCAPG00000001882-10093.489Cavia_aperea
ENSSDUG00000020466polr2a9988.822ENSCPOG00000014812-10093.242Cavia_porcellus
ENSSDUG00000020466polr2a8294.413ENSCCAG00000020938-8294.603Cebus_capucinus
ENSSDUG00000020466polr2a8294.413ENSCATG00000013680-8294.420Cercocebus_atys
ENSSDUG00000020466polr2a8294.289ENSCLAG00000012196-8294.476Chinchilla_lanigera
ENSSDUG00000020466polr2a8285.626ENSCSAG00000011644-8285.644Chlorocebus_sabaeus
ENSSDUG00000020466polr2a9184.022ENSCPBG00000012697POLR2A9985.964Chrysemys_picta_bellii
ENSSDUG00000020466polr2a9876.853ENSCING00000007884-9977.413Ciona_intestinalis
ENSSDUG00000020466polr2a9879.630ENSCSAVG00000008334-9981.731Ciona_savignyi
ENSSDUG00000020466polr2a8293.731ENSCANG00000010622-8293.738Colobus_angolensis_palliatus
ENSSDUG00000020466polr2a8189.320ENSCGRG00001003538Polr2a8189.333Cricetulus_griseus_chok1gshd
ENSSDUG00000020466polr2a8290.675ENSCGRG00000012105Polr2a9390.686Cricetulus_griseus_crigri
ENSSDUG00000020466polr2a9998.080ENSCSEG00000002635polr2a10098.080Cynoglossus_semilaevis
ENSSDUG00000020466polr2a10098.678ENSCVAG00000005156polr2a10098.678Cyprinodon_variegatus
ENSSDUG00000020466polr2a10097.458ENSDARG00000099966polr2a10097.458Danio_rerio
ENSSDUG00000020466polr2a8291.682ENSDNOG00000016482-8291.692Dasypus_novemcinctus
ENSSDUG00000020466polr2a8294.413ENSDORG00000008667Polr2a8294.603Dipodomys_ordii
ENSSDUG00000020466polr2a9970.148FBgn0003277RpII2159974.471Drosophila_melanogaster
ENSSDUG00000020466polr2a9490.000ENSETEG00000002540-8791.096Echinops_telfairi
ENSSDUG00000020466polr2a8287.586ENSEBUG00000013967polr2a8287.570Eptatretus_burgeri
ENSSDUG00000020466polr2a8292.365ENSEASG00005019114-8392.374Equus_asinus_asinus
ENSSDUG00000020466polr2a8294.413ENSECAG00000018485POLR2A8294.420Equus_caballus
ENSSDUG00000020466polr2a8594.326ENSEEUG00000001154-9594.326Erinaceus_europaeus
ENSSDUG00000020466polr2a8895.331ENSELUG00000014284polr2a8495.331Esox_lucius
ENSSDUG00000020466polr2a8294.475ENSFDAG00000008287-8294.482Fukomys_damarensis
ENSSDUG00000020466polr2a9998.434ENSFHEG00000001768polr2a10098.434Fundulus_heteroclitus
ENSSDUG00000020466polr2a9993.012ENSGMOG00000007725polr2a10093.012Gadus_morhua
ENSSDUG00000020466polr2a99100.000ENSGAFG00000005389polr2a10093.729Gambusia_affinis
ENSSDUG00000020466polr2a9994.800ENSGACG00000019366polr2a10094.583Gasterosteus_aculeatus
ENSSDUG00000020466polr2a8292.322ENSGGOG00000014800-9692.995Gorilla_gorilla
ENSSDUG00000020466polr2a9998.741ENSHBUG00000018937polr2a10098.741Haplochromis_burtoni
ENSSDUG00000020466polr2a8294.475ENSHGLG00000012381POLR2A8294.667Heterocephalus_glaber_female
ENSSDUG00000020466polr2a8294.475ENSHGLG00100014843POLR2A8294.667Heterocephalus_glaber_male
ENSSDUG00000020466polr2a10098.118ENSHCOG00000011874polr2a10098.118Hippocampus_comes
ENSSDUG00000020466polr2a10097.562ENSIPUG00000002613Polr2a10097.562Ictalurus_punctatus
ENSSDUG00000020466polr2a8294.413ENSSTOG00000001304-8294.603Ictidomys_tridecemlineatus
ENSSDUG00000020466polr2a8294.413ENSJJAG00000013049Polr2a8294.603Jaculus_jaculus
ENSSDUG00000020466polr2a82100.000ENSKMAG00000016343polr2a86100.000Kryptolebias_marmoratus
ENSSDUG00000020466polr2a9998.779ENSLBEG00000027652polr2a10098.779Labrus_bergylta
ENSSDUG00000020466polr2a8085.642ENSLACG00000012071POLR2A8185.714Latimeria_chalumnae
ENSSDUG00000020466polr2a8997.227ENSLOCG00000013863polr2a9796.772Lepisosteus_oculatus
ENSSDUG00000020466polr2a9991.166ENSLAFG00000008626-9794.420Loxodonta_africana
ENSSDUG00000020466polr2a5193.258ENSMFAG00000007042-9993.258Macaca_fascicularis
ENSSDUG00000020466polr2a8294.413ENSMMUG00000023620-9194.420Macaca_mulatta
ENSSDUG00000020466polr2a8293.979ENSMNEG00000040407-8293.986Macaca_nemestrina
ENSSDUG00000020466polr2a8090.078ENSMLEG00000030263-9993.258Mandrillus_leucophaeus
ENSSDUG00000020466polr2a10099.288ENSMAMG00000003351polr2a10099.288Mastacembelus_armatus
ENSSDUG00000020466polr2a10098.779ENSMZEG00005021429polr2a10098.779Maylandia_zebra
ENSSDUG00000020466polr2a5194.088ENSMAUG00000021055-9994.088Mesocricetus_auratus
ENSSDUG00000020466polr2a8294.351ENSMICG00000013372-9893.654Microcebus_murinus
ENSSDUG00000020466polr2a9992.132ENSMOCG00000018279Polr2a10092.142Microtus_ochrogaster
ENSSDUG00000020466polr2a9097.953ENSMMOG00000012515polr2a9297.953Mola_mola
ENSSDUG00000020466polr2a8294.289ENSMODG00000007009-8294.296Monodelphis_domestica
ENSSDUG00000020466polr2a9495.849ENSMALG00000008716polr2a9998.856Monopterus_albus
ENSSDUG00000020466polr2a8294.413MGP_CAROLIEiJ_G0016587Polr2a8294.603Mus_caroli
ENSSDUG00000020466polr2a8294.413ENSMUSG00000005198Polr2a8294.603Mus_musculus
ENSSDUG00000020466polr2a8292.274MGP_PahariEiJ_G0017718Polr2a8292.284Mus_pahari
ENSSDUG00000020466polr2a8294.413MGP_SPRETEiJ_G0017423Polr2a8294.603Mus_spretus
ENSSDUG00000020466polr2a8294.413ENSMPUG00000009648-8294.420Mustela_putorius_furo
ENSSDUG00000020466polr2a8293.924ENSMLUG00000009088-8293.932Myotis_lucifugus
ENSSDUG00000020466polr2a8294.413ENSNGAG00000002543Polr2a8294.603Nannospalax_galili
ENSSDUG00000020466polr2a10098.807ENSNBRG00000002005polr2a10098.807Neolamprologus_brichardi
ENSSDUG00000020466polr2a8194.596ENSNLEG00000009460-8294.603Nomascus_leucogenys
ENSSDUG00000020466polr2a9495.316ENSMEUG00000008611-9395.316Notamacropus_eugenii
ENSSDUG00000020466polr2a8094.125ENSOPRG00000015116-9994.125Ochotona_princeps
ENSSDUG00000020466polr2a8794.322ENSODEG00000017674-8589.951Octodon_degus
ENSSDUG00000020466polr2a10099.034ENSONIG00000009231polr2a10099.034Oreochromis_niloticus
ENSSDUG00000020466polr2a9990.345ENSOCUG00000017929-10094.296Oryctolagus_cuniculus
ENSSDUG00000020466polr2a10098.340ENSORLG00000006431polr2a10098.340Oryzias_latipes
ENSSDUG00000020466polr2a10098.340ENSORLG00020010235polr2a10098.340Oryzias_latipes_hni
ENSSDUG00000020466polr2a10098.237ENSORLG00015007075polr2a10098.237Oryzias_latipes_hsok
ENSSDUG00000020466polr2a9895.644ENSOMEG00000010713polr2a10098.009Oryzias_melastigma
ENSSDUG00000020466polr2a8294.413ENSOGAG00000033608-8294.420Otolemur_garnettii
ENSSDUG00000020466polr2a9194.413ENSOARG00000013874-9091.692Ovis_aries
ENSSDUG00000020466polr2a8194.498ENSPPAG00000043734-8990.154Pan_paniscus
ENSSDUG00000020466polr2a8194.596ENSPTRG00000008691POLR2A8294.603Pan_troglodytes
ENSSDUG00000020466polr2a8293.731ENSPANG00000024099-8293.905Papio_anubis
ENSSDUG00000020466polr2a7795.656ENSPKIG00000005727polr2a8595.656Paramormyrops_kingsleyae
ENSSDUG00000020466polr2a9892.831ENSPSIG00000014006POLR2A10092.751Pelodiscus_sinensis
ENSSDUG00000020466polr2a10098.007ENSPMGG00000019734polr2a10098.007Periophthalmus_magnuspinnatus
ENSSDUG00000020466polr2a8294.413ENSPEMG00000012521Polr2a8294.603Peromyscus_maniculatus_bairdii
ENSSDUG00000020466polr2a8694.293ENSPCIG00000028851-8294.293Phascolarctos_cinereus
ENSSDUG00000020466polr2a9998.575ENSPFOG00000007890polr2a9998.575Poecilia_formosa
ENSSDUG00000020466polr2a9998.575ENSPLAG00000007399polr2a9998.575Poecilia_latipinna
ENSSDUG00000020466polr2a10098.600ENSPMEG00000002071polr2a9998.600Poecilia_mexicana
ENSSDUG00000020466polr2a10098.600ENSPREG00000013122polr2a10098.600Poecilia_reticulata
ENSSDUG00000020466polr2a8294.413ENSPPYG00000007924-8294.420Pongo_abelii
ENSSDUG00000020466polr2a7495.263ENSPCAG00000006951-7495.263Procavia_capensis
ENSSDUG00000020466polr2a8194.596ENSPCOG00000025260-8294.603Propithecus_coquereli
ENSSDUG00000020466polr2a8294.103ENSPVAG00000005069-8294.110Pteropus_vampyrus
ENSSDUG00000020466polr2a10098.728ENSPNYG00000022340polr2a10098.728Pundamilia_nyererei
ENSSDUG00000020466polr2a10098.067ENSPNAG00000011237polr2a10098.067Pygocentrus_nattereri
ENSSDUG00000020466polr2a8294.351ENSRNOG00000028834Polr2a8294.358Rattus_norvegicus
ENSSDUG00000020466polr2a8294.041ENSRBIG00000002471-9194.048Rhinopithecus_bieti
ENSSDUG00000020466polr2a8294.413ENSRROG00000029583-8993.552Rhinopithecus_roxellana
ENSSDUG00000020466polr2a8450.522YDL140CRPO219983.544Saccharomyces_cerevisiae
ENSSDUG00000020466polr2a8294.413ENSSBOG00000000808-8294.603Saimiri_boliviensis_boliviensis
ENSSDUG00000020466polr2a9394.289ENSSHAG00000002858-8494.296Sarcophilus_harrisii
ENSSDUG00000020466polr2a9997.668ENSSFOG00015023275polr2a10097.668Scleropages_formosus
ENSSDUG00000020466polr2a10096.338ENSSMAG00000009137polr2a10095.829Scophthalmus_maximus
ENSSDUG00000020466polr2a10099.949ENSSLDG00000020613polr2a10099.949Seriola_lalandi_dorsalis
ENSSDUG00000020466polr2a9590.072ENSSARG00000005875-9990.892Sorex_araneus
ENSSDUG00000020466polr2a100100.000ENSSPAG00000016741polr2a95100.000Stegastes_partitus
ENSSDUG00000020466polr2a8293.482ENSSSCG00000028278-8293.490Sus_scrofa
ENSSDUG00000020466polr2a9892.940ENSTRUG00000012320polr2a8192.940Takifugu_rubripes
ENSSDUG00000020466polr2a9495.800ENSTNIG00000010136polr2a10095.528Tetraodon_nigroviridis
ENSSDUG00000020466polr2a7694.898ENSTBEG00000013294-5894.898Tupaia_belangeri
ENSSDUG00000020466polr2a8292.737ENSTTRG00000014273-8292.746Tursiops_truncatus
ENSSDUG00000020466polr2a9394.166ENSUAMG00000014866-10091.466Ursus_americanus
ENSSDUG00000020466polr2a7491.602ENSUMAG00000015732-8391.061Ursus_maritimus
ENSSDUG00000020466polr2a6598.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSSDUG00000020466polr2a8294.351ENSVVUG00000027878-8394.358Vulpes_vulpes
ENSSDUG00000020466polr2a8194.336ENSXETG00000012465polr2a8294.343Xenopus_tropicalis
ENSSDUG00000020466polr2a9697.691ENSXCOG00000001804polr2a10097.691Xiphophorus_couchianus
ENSSDUG00000020466polr2a10098.548ENSXMAG00000015687polr2a10098.548Xiphophorus_maculatus

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