EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000020470 (Gene tree)
Gene ID: 111219413
Gene Symbol: pde12
Alias: fc58c05|fi42f03|wu:fc58c05|wu:fi42f03|zgc:136374
Full Name: phosphodiesterase 12
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5355 bases
Position: chrBDQW01000066.1:2963955-2969309
Accession: 111219413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000028359	Exo_endo_phos	PF03372.23	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000028850	-	2749	XM_022742080	ENSSDUP00000028359	591 (aa)	XP_022597801	UPI000BBECA9D

Gene Model

Click here to download ENSSDUG00000020470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020470	pde12	94	59.585	ENSG00000174840	PDE12	95	59.725	Homo_sapiens
ENSSDUG00000020470	pde12	99	82.107	ENSAPOG00000018806	pde12	99	82.107	Acanthochromis_polyacanthus
ENSSDUG00000020470	pde12	94	58.916	ENSAMEG00000011802	PDE12	99	58.916	Ailuropoda_melanoleuca
ENSSDUG00000020470	pde12	100	81.145	ENSACIG00000014918	pde12	100	81.145	Amphilophus_citrinellus
ENSSDUG00000020470	pde12	99	83.729	ENSAOCG00000016376	pde12	99	83.729	Amphiprion_ocellaris
ENSSDUG00000020470	pde12	99	83.729	ENSAPEG00000000756	pde12	99	83.729	Amphiprion_percula
ENSSDUG00000020470	pde12	100	84.264	ENSATEG00000003072	pde12	100	84.264	Anabas_testudineus
ENSSDUG00000020470	pde12	94	55.166	ENSACAG00000003067	PDE12	95	54.359	Anolis_carolinensis
ENSSDUG00000020470	pde12	94	59.619	ENSANAG00000011815	PDE12	95	59.792	Aotus_nancymaae
ENSSDUG00000020470	pde12	100	81.419	ENSACLG00000010127	pde12	100	81.419	Astatotilapia_calliptera
ENSSDUG00000020470	pde12	99	64.073	ENSAMXG00000020765	pde12	99	64.073	Astyanax_mexicanus
ENSSDUG00000020470	pde12	95	59.310	ENSBTAG00000015563	PDE12	95	59.655	Bos_taurus
ENSSDUG00000020470	pde12	94	59.585	ENSCJAG00000019905	PDE12	95	59.585	Callithrix_jacchus
ENSSDUG00000020470	pde12	94	57.679	ENSCAFG00000007792	PDE12	94	58.944	Canis_familiaris
ENSSDUG00000020470	pde12	94	57.732	ENSCAFG00020006692	PDE12	94	58.944	Canis_lupus_dingo
ENSSDUG00000020470	pde12	95	59.898	ENSCHIG00000014202	PDE12	95	59.966	Capra_hircus
ENSSDUG00000020470	pde12	94	59.036	ENSTSYG00000025750	PDE12	95	59.005	Carlito_syrichta
ENSSDUG00000020470	pde12	94	59.758	ENSCPOG00000001620	PDE12	95	59.758	Cavia_porcellus
ENSSDUG00000020470	pde12	94	52.166	ENSCCAG00000031290	PDE12	94	52.166	Cebus_capucinus
ENSSDUG00000020470	pde12	94	59.240	ENSCATG00000044539	PDE12	95	59.655	Cercocebus_atys
ENSSDUG00000020470	pde12	94	57.539	ENSCLAG00000004864	PDE12	95	59.310	Chinchilla_lanigera
ENSSDUG00000020470	pde12	94	59.516	ENSCSAG00000012275	PDE12	95	59.689	Chlorocebus_sabaeus
ENSSDUG00000020470	pde12	84	64.578	ENSCHOG00000002188	-	83	64.578	Choloepus_hoffmanni
ENSSDUG00000020470	pde12	66	64.010	ENSCHOG00000012173	-	93	64.010	Choloepus_hoffmanni
ENSSDUG00000020470	pde12	94	58.377	ENSCPBG00000012353	PDE12	91	59.083	Chrysemys_picta_bellii
ENSSDUG00000020470	pde12	93	35.575	ENSCING00000006903	-	100	36.364	Ciona_intestinalis
ENSSDUG00000020470	pde12	94	59.413	ENSCANG00000038723	PDE12	95	59.552	Colobus_angolensis_palliatus
ENSSDUG00000020470	pde12	94	58.579	ENSCGRG00001021836	Pde12	94	59.240	Cricetulus_griseus_chok1gshd
ENSSDUG00000020470	pde12	94	58.609	ENSCGRG00000012319	Pde12	94	58.925	Cricetulus_griseus_crigri
ENSSDUG00000020470	pde12	94	79.391	ENSCSEG00000018538	pde12	100	79.391	Cynoglossus_semilaevis
ENSSDUG00000020470	pde12	100	65.372	ENSCVAG00000003624	pde12	100	65.372	Cyprinodon_variegatus
ENSSDUG00000020470	pde12	98	60.967	ENSDARG00000030964	pde12	95	60.967	Danio_rerio
ENSSDUG00000020470	pde12	94	58.065	ENSDNOG00000048413	PDE12	95	58.065	Dasypus_novemcinctus
ENSSDUG00000020470	pde12	94	58.579	ENSDORG00000004313	Pde12	99	56.979	Dipodomys_ordii
ENSSDUG00000020470	pde12	94	34.130	FBgn0051759	CG31759	99	34.130	Drosophila_melanogaster
ENSSDUG00000020470	pde12	70	43.750	ENSEBUG00000004803	pde12	77	43.750	Eptatretus_burgeri
ENSSDUG00000020470	pde12	94	59.413	ENSEASG00005000644	PDE12	95	59.691	Equus_asinus_asinus
ENSSDUG00000020470	pde12	94	59.585	ENSECAG00000005326	PDE12	95	59.863	Equus_caballus
ENSSDUG00000020470	pde12	53	61.850	ENSEEUG00000010406	-	54	61.850	Erinaceus_europaeus
ENSSDUG00000020470	pde12	99	66.216	ENSELUG00000014391	pde12	98	66.385	Esox_lucius
ENSSDUG00000020470	pde12	94	58.507	ENSFCAG00000031696	PDE12	95	58.591	Felis_catus
ENSSDUG00000020470	pde12	81	60.499	ENSFALG00000008401	PDE12	99	60.499	Ficedula_albicollis
ENSSDUG00000020470	pde12	95	59.215	ENSFDAG00000021278	PDE12	95	59.114	Fukomys_damarensis
ENSSDUG00000020470	pde12	94	77.396	ENSFHEG00000018967	pde12	91	76.703	Fundulus_heteroclitus
ENSSDUG00000020470	pde12	95	66.489	ENSGMOG00000018041	pde12	99	66.489	Gadus_morhua
ENSSDUG00000020470	pde12	94	59.541	ENSGALG00000052355	PDE12	96	59.123	Gallus_gallus
ENSSDUG00000020470	pde12	99	77.627	ENSGAFG00000002045	pde12	99	77.627	Gambusia_affinis
ENSSDUG00000020470	pde12	100	80.776	ENSGACG00000003914	pde12	100	81.450	Gasterosteus_aculeatus
ENSSDUG00000020470	pde12	98	57.023	ENSGAGG00000010266	PDE12	96	57.692	Gopherus_agassizii
ENSSDUG00000020470	pde12	94	59.585	ENSGGOG00000003312	PDE12	95	59.725	Gorilla_gorilla
ENSSDUG00000020470	pde12	100	82.264	ENSHBUG00000023370	pde12	100	82.264	Haplochromis_burtoni
ENSSDUG00000020470	pde12	95	59.044	ENSHGLG00000005661	PDE12	95	59.284	Heterocephalus_glaber_female
ENSSDUG00000020470	pde12	95	58.874	ENSHGLG00100001136	PDE12	95	58.773	Heterocephalus_glaber_male
ENSSDUG00000020470	pde12	100	73.134	ENSHCOG00000013749	pde12	100	73.134	Hippocampus_comes
ENSSDUG00000020470	pde12	98	63.621	ENSIPUG00000007123	Pde12	97	63.621	Ictalurus_punctatus
ENSSDUG00000020470	pde12	94	58.377	ENSSTOG00000007861	PDE12	96	57.912	Ictidomys_tridecemlineatus
ENSSDUG00000020470	pde12	94	57.167	ENSJJAG00000006038	Pde12	96	57.571	Jaculus_jaculus
ENSSDUG00000020470	pde12	99	81.695	ENSKMAG00000018523	pde12	99	81.695	Kryptolebias_marmoratus
ENSSDUG00000020470	pde12	96	77.547	ENSLBEG00000026775	pde12	100	78.536	Labrus_bergylta
ENSSDUG00000020470	pde12	96	82.496	ENSLBEG00000009762	PDE12	100	83.306	Labrus_bergylta
ENSSDUG00000020470	pde12	95	64.401	ENSLACG00000015492	PDE12	94	64.401	Latimeria_chalumnae
ENSSDUG00000020470	pde12	95	64.884	ENSLOCG00000013277	pde12	94	64.884	Lepisosteus_oculatus
ENSSDUG00000020470	pde12	92	59.011	ENSLAFG00000002821	PDE12	99	60.000	Loxodonta_africana
ENSSDUG00000020470	pde12	94	59.585	ENSMFAG00000030966	PDE12	95	59.725	Macaca_fascicularis
ENSSDUG00000020470	pde12	94	59.585	ENSMMUG00000004052	PDE12	95	59.725	Macaca_mulatta
ENSSDUG00000020470	pde12	94	59.585	ENSMNEG00000030068	PDE12	95	59.725	Macaca_nemestrina
ENSSDUG00000020470	pde12	94	59.585	ENSMLEG00000036137	PDE12	95	59.725	Mandrillus_leucophaeus
ENSSDUG00000020470	pde12	100	85.956	ENSMAMG00000014415	pde12	100	85.956	Mastacembelus_armatus
ENSSDUG00000020470	pde12	96	78.947	ENSMZEG00005028202	-	99	79.433	Maylandia_zebra
ENSSDUG00000020470	pde12	100	82.095	ENSMZEG00005016132	pde12	100	82.095	Maylandia_zebra
ENSSDUG00000020470	pde12	53	66.352	ENSMGAG00000006449	PDE12	98	66.352	Meleagris_gallopavo
ENSSDUG00000020470	pde12	94	57.143	ENSMAUG00000000442	Pde12	95	57.143	Mesocricetus_auratus
ENSSDUG00000020470	pde12	94	58.621	ENSMICG00000005723	PDE12	95	58.591	Microcebus_murinus
ENSSDUG00000020470	pde12	94	58.421	ENSMOCG00000020734	Pde12	94	60.070	Microtus_ochrogaster
ENSSDUG00000020470	pde12	100	83.418	ENSMMOG00000013636	pde12	100	83.418	Mola_mola
ENSSDUG00000020470	pde12	94	57.618	ENSMODG00000000155	PDE12	95	57.793	Monodelphis_domestica
ENSSDUG00000020470	pde12	100	82.741	ENSMALG00000022647	pde12	100	82.741	Monopterus_albus
ENSSDUG00000020470	pde12	94	59.932	MGP_CAROLIEiJ_G0019032	Pde12	94	59.862	Mus_caroli
ENSSDUG00000020470	pde12	94	60.274	ENSMUSG00000043702	Pde12	94	60.208	Mus_musculus
ENSSDUG00000020470	pde12	94	60.208	MGP_PahariEiJ_G0030049	Pde12	94	60.208	Mus_pahari
ENSSDUG00000020470	pde12	94	60.103	MGP_SPRETEiJ_G0019916	Pde12	94	60.035	Mus_spretus
ENSSDUG00000020470	pde12	94	57.759	ENSMPUG00000016869	PDE12	95	58.377	Mustela_putorius_furo
ENSSDUG00000020470	pde12	94	58.752	ENSMLUG00000026487	PDE12	95	59.445	Myotis_lucifugus
ENSSDUG00000020470	pde12	96	58.219	ENSNGAG00000001228	Pde12	96	58.219	Nannospalax_galili
ENSSDUG00000020470	pde12	99	73.898	ENSNBRG00000015769	pde12	69	73.898	Neolamprologus_brichardi
ENSSDUG00000020470	pde12	94	59.585	ENSNLEG00000007269	-	95	59.725	Nomascus_leucogenys
ENSSDUG00000020470	pde12	94	55.789	ENSNLEG00000034833	-	94	55.944	Nomascus_leucogenys
ENSSDUG00000020470	pde12	93	56.272	ENSMEUG00000006786	PDE12	94	57.295	Notamacropus_eugenii
ENSSDUG00000020470	pde12	94	58.591	ENSOPRG00000015273	PDE12	95	59.794	Ochotona_princeps
ENSSDUG00000020470	pde12	94	59.240	ENSODEG00000006268	PDE12	96	59.091	Octodon_degus
ENSSDUG00000020470	pde12	94	83.513	ENSONIG00000004293	pde12	100	83.513	Oreochromis_niloticus
ENSSDUG00000020470	pde12	88	55.882	ENSOANG00000012885	PDE12	98	57.090	Ornithorhynchus_anatinus
ENSSDUG00000020470	pde12	94	59.826	ENSOCUG00000000823	PDE12	95	59.966	Oryctolagus_cuniculus
ENSSDUG00000020470	pde12	100	75.169	ENSORLG00000017444	pde12	100	75.169	Oryzias_latipes
ENSSDUG00000020470	pde12	100	74.662	ENSORLG00020010469	pde12	100	74.662	Oryzias_latipes_hni
ENSSDUG00000020470	pde12	100	75.338	ENSORLG00015004093	pde12	100	75.338	Oryzias_latipes_hsok
ENSSDUG00000020470	pde12	100	74.788	ENSOMEG00000020900	pde12	100	74.788	Oryzias_melastigma
ENSSDUG00000020470	pde12	94	58.549	ENSOGAG00000024093	PDE12	95	58.895	Otolemur_garnettii
ENSSDUG00000020470	pde12	90	59.099	ENSOARG00000013642	PDE12	99	59.459	Ovis_aries
ENSSDUG00000020470	pde12	94	59.240	ENSPPAG00000034712	PDE12	95	59.380	Pan_paniscus
ENSSDUG00000020470	pde12	94	58.333	ENSPPRG00000011738	PDE12	95	58.419	Panthera_pardus
ENSSDUG00000020470	pde12	83	58.614	ENSPTIG00000019166	PDE12	95	58.743	Panthera_tigris_altaica
ENSSDUG00000020470	pde12	94	59.413	ENSPTRG00000030221	PDE12	95	59.552	Pan_troglodytes
ENSSDUG00000020470	pde12	94	59.413	ENSPANG00000007324	PDE12	95	59.552	Papio_anubis
ENSSDUG00000020470	pde12	98	64.372	ENSPKIG00000025354	pde12	97	64.372	Paramormyrops_kingsleyae
ENSSDUG00000020470	pde12	94	58.421	ENSPSIG00000004926	PDE12	91	59.019	Pelodiscus_sinensis
ENSSDUG00000020470	pde12	100	65.936	ENSPMGG00000006742	pde12	97	68.449	Periophthalmus_magnuspinnatus
ENSSDUG00000020470	pde12	80	62.085	ENSPEMG00000007259	Pde12	91	61.814	Peromyscus_maniculatus_bairdii
ENSSDUG00000020470	pde12	99	79.698	ENSPFOG00000011864	pde12	99	79.698	Poecilia_formosa
ENSSDUG00000020470	pde12	73	82.639	ENSPLAG00000023871	pde12	80	82.639	Poecilia_latipinna
ENSSDUG00000020470	pde12	99	80.169	ENSPMEG00000005674	pde12	99	80.169	Poecilia_mexicana
ENSSDUG00000020470	pde12	99	80.508	ENSPREG00000022831	pde12	99	80.508	Poecilia_reticulata
ENSSDUG00000020470	pde12	97	58.431	ENSPPYG00000013769	PDE12	98	58.431	Pongo_abelii
ENSSDUG00000020470	pde12	94	58.448	ENSPCOG00000026004	PDE12	95	58.419	Propithecus_coquereli
ENSSDUG00000020470	pde12	94	58.783	ENSPVAG00000008885	PDE12	95	59.130	Pteropus_vampyrus
ENSSDUG00000020470	pde12	100	82.095	ENSPNYG00000013258	pde12	100	82.095	Pundamilia_nyererei
ENSSDUG00000020470	pde12	95	67.082	ENSPNAG00000029032	pde12	95	67.972	Pygocentrus_nattereri
ENSSDUG00000020470	pde12	94	60.103	ENSRNOG00000059442	Pde12	94	60.034	Rattus_norvegicus
ENSSDUG00000020470	pde12	94	59.585	ENSRBIG00000040704	PDE12	95	59.758	Rhinopithecus_bieti
ENSSDUG00000020470	pde12	94	59.585	ENSRROG00000031279	PDE12	95	59.758	Rhinopithecus_roxellana
ENSSDUG00000020470	pde12	94	59.091	ENSSBOG00000023974	PDE12	94	60.174	Saimiri_boliviensis_boliviensis
ENSSDUG00000020470	pde12	80	69.851	ENSSFOG00015003468	pde12	88	69.851	Scleropages_formosus
ENSSDUG00000020470	pde12	96	81.787	ENSSMAG00000003258	pde12	96	82.723	Scophthalmus_maximus
ENSSDUG00000020470	pde12	100	94.585	ENSSLDG00000019833	pde12	100	94.585	Seriola_lalandi_dorsalis
ENSSDUG00000020470	pde12	94	59.337	ENSSARG00000007201	PDE12	95	59.619	Sorex_araneus
ENSSDUG00000020470	pde12	99	82.881	ENSSPAG00000014980	pde12	99	82.881	Stegastes_partitus
ENSSDUG00000020470	pde12	54	56.875	ENSSSCG00000034476	-	74	56.875	Sus_scrofa
ENSSDUG00000020470	pde12	94	59.067	ENSSSCG00000011465	-	95	59.413	Sus_scrofa
ENSSDUG00000020470	pde12	63	64.324	ENSTGUG00000007290	PDE12	99	64.324	Taeniopygia_guttata
ENSSDUG00000020470	pde12	100	77.365	ENSTRUG00000005159	pde12	99	77.703	Takifugu_rubripes
ENSSDUG00000020470	pde12	99	75.763	ENSTNIG00000017497	pde12	100	75.763	Tetraodon_nigroviridis
ENSSDUG00000020470	pde12	77	64.706	ENSTBEG00000008202	PDE12	77	64.706	Tupaia_belangeri
ENSSDUG00000020470	pde12	94	59.413	ENSTTRG00000014707	PDE12	95	59.758	Tursiops_truncatus
ENSSDUG00000020470	pde12	70	51.551	ENSUAMG00000008368	-	91	52.029	Ursus_americanus
ENSSDUG00000020470	pde12	94	58.406	ENSUAMG00000020634	-	95	58.722	Ursus_americanus
ENSSDUG00000020470	pde12	73	60.274	ENSUMAG00000021906	PDE12	99	60.407	Ursus_maritimus
ENSSDUG00000020470	pde12	94	58.549	ENSVVUG00000020335	PDE12	92	58.632	Vulpes_vulpes
ENSSDUG00000020470	pde12	95	50.626	ENSXETG00000008653	pde12	97	50.626	Xenopus_tropicalis
ENSSDUG00000020470	pde12	97	79.965	ENSXCOG00000000407	pde12	99	79.965	Xiphophorus_couchianus
ENSSDUG00000020470	pde12	99	80.678	ENSXMAG00000013370	pde12	100	80.678	Xiphophorus_maculatus