EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000020500 (Gene tree)
Gene ID: 111228039
Gene Symbol: phkg1a
Alias: zgc:153009
Full Name: phosphorylase kinase catalytic subunit gamma 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 9664 bases
Position: chrBDQW01000199.1:223988-233651
Accession: 111228039
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000028404	RIO1	PF01163.22	0.00018	1	1
ENSSDUP00000028389	RIO1	PF01163.22	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000028895	-	2330	XM_022753815	ENSSDUP00000028404	394 (aa)	XP_022609536	UPI000BBEA5E0
ENSSDUT00000028880	-	2235	-	ENSSDUP00000028389	401 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000020500's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu04020	Calcium signaling pathway	KEGG
sdu04910	Insulin signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020500's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000020500	phkg1a	78	32.508	ENSSDUG00000008929	dapk2b	85	34.528
ENSSDUG00000020500	phkg1a	80	35.329	ENSSDUG00000012176	dapk3	71	35.329
ENSSDUG00000020500	phkg1a	68	34.572	ENSSDUG00000008040	CAMK1G	74	34.572
ENSSDUG00000020500	phkg1a	67	34.201	ENSSDUG00000004939	camk1gb	51	34.201
ENSSDUG00000020500	phkg1a	68	33.091	ENSSDUG00000016262	rps6ka4	67	33.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020500	phkg1a	100	90.355	ENSAPOG00000014226	phkg1a	100	90.355	Acanthochromis_polyacanthus
ENSSDUG00000020500	phkg1a	100	91.371	ENSAOCG00000015642	phkg1a	100	91.371	Amphiprion_ocellaris
ENSSDUG00000020500	phkg1a	100	91.117	ENSAPEG00000013744	phkg1a	100	91.117	Amphiprion_percula
ENSSDUG00000020500	phkg1a	100	88.071	ENSCSEG00000009748	phkg1a	100	88.071	Cynoglossus_semilaevis
ENSSDUG00000020500	phkg1a	98	74.286	ENSFALG00000006773	PHKG1	99	74.286	Ficedula_albicollis
ENSSDUG00000020500	phkg1a	100	83.503	ENSIPUG00000007850	PHKG1	100	83.503	Ictalurus_punctatus
ENSSDUG00000020500	phkg1a	96	73.810	ENSMGAG00000004428	PHKG1	99	72.868	Meleagris_gallopavo
ENSSDUG00000020500	phkg1a	100	86.548	ENSORLG00015000078	phkg1a	100	86.548	Oryzias_latipes_hsok
ENSSDUG00000020500	phkg1a	100	85.279	ENSPNAG00000007377	phkg1a	100	85.279	Pygocentrus_nattereri
ENSSDUG00000020500	phkg1a	100	92.132	ENSSMAG00000016659	phkg1a	100	92.132	Scophthalmus_maximus
ENSSDUG00000020500	phkg1a	100	99.746	ENSSLDG00000016024	phkg1a	100	99.746	Seriola_lalandi_dorsalis
ENSSDUG00000020500	phkg1a	98	74.286	ENSTGUG00000005156	PHKG1	99	74.286	Taeniopygia_guttata
ENSSDUG00000020500	phkg1a	98	90.181	ENSTNIG00000002064	phkg1a	99	90.181	Tetraodon_nigroviridis