EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000020558 (Gene tree)
Gene ID: 111228061
Gene Symbol: im:7138535
Alias: -
Full Name: protein FAM98B-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3293 bases
Position: chrBDQW01000199.1:238208-241500
Accession: 111228061
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000028490	DUF2465	PF10239.9	1.1e-49	1	1
ENSSDUP00000028519	DUF2465	PF10239.9	3.9e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000029012	-	1047	-	ENSSDUP00000028519	348 (aa)	-	-
ENSSDUT00000028983	-	1544	XM_022753845	ENSSDUP00000028490	347 (aa)	XP_022609566	UPI000BBEDAE0

Gene Model

Click here to download ENSSDUG00000020558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000020558	im:7138535	78	30.068	ENSSDUG00000022080	-	58	31.250
ENSSDUG00000020558	im:7138535	51	36.458	ENSSDUG00000015289	fam98b	63	36.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020558	im:7138535	69	32.296	ENSG00000130244	FAM98C	66	32.157	Homo_sapiens
ENSSDUG00000020558	im:7138535	91	30.994	ENSAPOG00000011449	fam98b	86	31.461	Acanthochromis_polyacanthus
ENSSDUG00000020558	im:7138535	98	68.306	ENSAPOG00000014173	-	98	68.306	Acanthochromis_polyacanthus
ENSSDUG00000020558	im:7138535	76	34.767	ENSAMEG00000010326	FAM98C	69	33.700	Ailuropoda_melanoleuca
ENSSDUG00000020558	im:7138535	100	71.470	ENSACIG00000002526	im:7138535	98	72.107	Amphilophus_citrinellus
ENSSDUG00000020558	im:7138535	91	30.294	ENSACIG00000015069	fam98b	85	30.532	Amphilophus_citrinellus
ENSSDUG00000020558	im:7138535	91	31.105	ENSAOCG00000018313	fam98b	86	31.025	Amphiprion_ocellaris
ENSSDUG00000020558	im:7138535	98	74.561	ENSAOCG00000002680	-	97	74.561	Amphiprion_ocellaris
ENSSDUG00000020558	im:7138535	91	31.105	ENSAPEG00000016398	fam98b	86	31.025	Amphiprion_percula
ENSSDUG00000020558	im:7138535	98	74.561	ENSAPEG00000013731	-	97	74.561	Amphiprion_percula
ENSSDUG00000020558	im:7138535	98	71.429	ENSATEG00000010695	-	98	71.429	Anabas_testudineus
ENSSDUG00000020558	im:7138535	83	33.117	ENSATEG00000011057	fam98b	80	32.628	Anabas_testudineus
ENSSDUG00000020558	im:7138535	83	34.615	ENSACAG00000002418	FAM98C	84	34.862	Anolis_carolinensis
ENSSDUG00000020558	im:7138535	55	36.765	ENSANAG00000035244	FAM98C	70	31.752	Aotus_nancymaae
ENSSDUG00000020558	im:7138535	67	32.365	ENSACLG00000013626	fam98b	59	32.558	Astatotilapia_calliptera
ENSSDUG00000020558	im:7138535	96	59.403	ENSACLG00000018753	-	93	59.403	Astatotilapia_calliptera
ENSSDUG00000020558	im:7138535	93	70.186	ENSACLG00000020293	-	91	69.436	Astatotilapia_calliptera
ENSSDUG00000020558	im:7138535	91	30.814	ENSAMXG00000014694	fam98b	64	35.069	Astyanax_mexicanus
ENSSDUG00000020558	im:7138535	98	53.488	ENSAMXG00000042035	im:7138535	97	53.488	Astyanax_mexicanus
ENSSDUG00000020558	im:7138535	76	33.929	ENSBTAG00000039593	FAM98C	63	33.835	Bos_taurus
ENSSDUG00000020558	im:7138535	73	33.457	ENSCAFG00000005919	FAM98C	82	30.854	Canis_familiaris
ENSSDUG00000020558	im:7138535	76	34.058	ENSCAFG00020017778	FAM98C	97	39.568	Canis_lupus_dingo
ENSSDUG00000020558	im:7138535	76	33.333	ENSCHIG00000019659	FAM98C	69	32.721	Capra_hircus
ENSSDUG00000020558	im:7138535	78	30.584	ENSTSYG00000034922	FAM98A	58	31.707	Carlito_syrichta
ENSSDUG00000020558	im:7138535	73	31.579	ENSCCAG00000032150	FAM98C	68	31.579	Cebus_capucinus
ENSSDUG00000020558	im:7138535	50	36.898	ENSCATG00000023670	FAM98C	69	31.343	Cercocebus_atys
ENSSDUG00000020558	im:7138535	50	36.757	ENSCSAG00000004058	FAM98C	100	35.354	Chlorocebus_sabaeus
ENSSDUG00000020558	im:7138535	67	37.037	ENSCPBG00000008728	-	95	37.500	Chrysemys_picta_bellii
ENSSDUG00000020558	im:7138535	50	36.757	ENSCANG00000026868	FAM98C	94	36.757	Colobus_angolensis_palliatus
ENSSDUG00000020558	im:7138535	73	33.459	ENSCGRG00001013657	Fam98c	70	33.582	Cricetulus_griseus_chok1gshd
ENSSDUG00000020558	im:7138535	100	71.388	ENSCSEG00000009775	im:7138535	98	71.304	Cynoglossus_semilaevis
ENSSDUG00000020558	im:7138535	83	33.333	ENSCSEG00000004831	fam98b	71	33.642	Cynoglossus_semilaevis
ENSSDUG00000020558	im:7138535	78	30.070	ENSCVAG00000003248	fam98b	77	31.761	Cyprinodon_variegatus
ENSSDUG00000020558	im:7138535	83	57.986	ENSCVAG00000007841	-	68	63.673	Cyprinodon_variegatus
ENSSDUG00000020558	im:7138535	100	49.438	ENSDARG00000057245	im:7138535	96	49.709	Danio_rerio
ENSSDUG00000020558	im:7138535	82	32.450	ENSDARG00000060068	fam98b	80	32.381	Danio_rerio
ENSSDUG00000020558	im:7138535	51	31.183	ENSDNOG00000034425	-	58	30.622	Dasypus_novemcinctus
ENSSDUG00000020558	im:7138535	70	30.916	ENSDORG00000012253	Fam98a	53	32.441	Dipodomys_ordii
ENSSDUG00000020558	im:7138535	56	36.232	ENSECAG00000021399	-	54	31.786	Equus_caballus
ENSSDUG00000020558	im:7138535	82	31.090	ENSELUG00000013165	fam98a	56	31.529	Esox_lucius
ENSSDUG00000020558	im:7138535	100	55.807	ENSELUG00000019550	im:7138535	98	56.936	Esox_lucius
ENSSDUG00000020558	im:7138535	83	31.699	ENSELUG00000006690	fam98b	68	32.384	Esox_lucius
ENSSDUG00000020558	im:7138535	96	30.481	ENSFCAG00000000826	FAM98C	97	30.481	Felis_catus
ENSSDUG00000020558	im:7138535	91	69.565	ENSFHEG00000005365	-	99	67.521	Fundulus_heteroclitus
ENSSDUG00000020558	im:7138535	91	30.294	ENSFHEG00000020445	fam98b	85	30.769	Fundulus_heteroclitus
ENSSDUG00000020558	im:7138535	87	56.250	ENSGMOG00000011664	-	98	56.707	Gadus_morhua
ENSSDUG00000020558	im:7138535	91	31.471	ENSGAFG00000019645	fam98b	88	31.389	Gambusia_affinis
ENSSDUG00000020558	im:7138535	99	68.195	ENSGAFG00000010684	-	97	68.529	Gambusia_affinis
ENSSDUG00000020558	im:7138535	99	69.429	ENSGACG00000008979	-	98	70.930	Gasterosteus_aculeatus
ENSSDUG00000020558	im:7138535	76	30.742	ENSGACG00000010534	fam98b	78	30.303	Gasterosteus_aculeatus
ENSSDUG00000020558	im:7138535	89	36.778	ENSGAGG00000016487	FAM98C	89	36.646	Gopherus_agassizii
ENSSDUG00000020558	im:7138535	69	32.296	ENSGGOG00000004470	FAM98C	69	31.343	Gorilla_gorilla
ENSSDUG00000020558	im:7138535	63	66.364	ENSHBUG00000018179	-	92	66.364	Haplochromis_burtoni
ENSSDUG00000020558	im:7138535	67	32.780	ENSHBUG00000017779	fam98b	59	32.946	Haplochromis_burtoni
ENSSDUG00000020558	im:7138535	70	67.213	ENSHBUG00000016825	-	80	67.213	Haplochromis_burtoni
ENSSDUG00000020558	im:7138535	100	60.807	ENSHCOG00000017023	im:7138535	98	61.721	Hippocampus_comes
ENSSDUG00000020558	im:7138535	99	52.312	ENSIPUG00000024006	im:7138535	98	52.212	Ictalurus_punctatus
ENSSDUG00000020558	im:7138535	74	35.055	ENSIPUG00000006869	fam98b	65	36.042	Ictalurus_punctatus
ENSSDUG00000020558	im:7138535	84	31.847	ENSSTOG00000022450	FAM98C	91	31.503	Ictidomys_tridecemlineatus
ENSSDUG00000020558	im:7138535	99	68.986	ENSKMAG00000015503	im:7138535	97	70.796	Kryptolebias_marmoratus
ENSSDUG00000020558	im:7138535	83	31.250	ENSKMAG00000011017	fam98b	78	31.034	Kryptolebias_marmoratus
ENSSDUG00000020558	im:7138535	91	73.817	ENSLBEG00000026478	im:7138535	94	72.836	Labrus_bergylta
ENSSDUG00000020558	im:7138535	83	32.154	ENSLOCG00000012257	fam98b	80	32.515	Lepisosteus_oculatus
ENSSDUG00000020558	im:7138535	74	36.029	ENSLAFG00000020798	FAM98C	95	35.361	Loxodonta_africana
ENSSDUG00000020558	im:7138535	50	37.097	ENSMMUG00000020468	FAM98C	99	35.678	Macaca_mulatta
ENSSDUG00000020558	im:7138535	50	36.898	ENSMNEG00000041959	FAM98C	69	31.343	Macaca_nemestrina
ENSSDUG00000020558	im:7138535	50	36.757	ENSMLEG00000042221	FAM98C	100	35.354	Mandrillus_leucophaeus
ENSSDUG00000020558	im:7138535	100	75.499	ENSMAMG00000009488	im:7138535	98	75.510	Mastacembelus_armatus
ENSSDUG00000020558	im:7138535	83	31.579	ENSMAMG00000005919	fam98b	78	31.875	Mastacembelus_armatus
ENSSDUG00000020558	im:7138535	93	70.497	ENSMZEG00005015389	-	98	69.733	Maylandia_zebra
ENSSDUG00000020558	im:7138535	87	67.110	ENSMZEG00005015997	-	98	66.456	Maylandia_zebra
ENSSDUG00000020558	im:7138535	67	32.365	ENSMZEG00005002623	fam98b	59	32.558	Maylandia_zebra
ENSSDUG00000020558	im:7138535	76	33.333	ENSMICG00000004244	FAM98C	69	33.086	Microcebus_murinus
ENSSDUG00000020558	im:7138535	75	34.182	ENSMOCG00000018846	Fam98c	71	33.829	Microtus_ochrogaster
ENSSDUG00000020558	im:7138535	74	31.047	ENSMMOG00000007979	fam98a	55	31.047	Mola_mola
ENSSDUG00000020558	im:7138535	100	75.072	ENSMMOG00000012054	im:7138535	98	74.780	Mola_mola
ENSSDUG00000020558	im:7138535	70	31.008	ENSMODG00000013175	-	95	31.008	Monodelphis_domestica
ENSSDUG00000020558	im:7138535	98	75.510	ENSMALG00000005360	-	98	75.510	Monopterus_albus
ENSSDUG00000020558	im:7138535	78	30.068	ENSMALG00000021529	fam98a	61	31.454	Monopterus_albus
ENSSDUG00000020558	im:7138535	74	32.727	ENSMALG00000016464	fam98b	63	32.872	Monopterus_albus
ENSSDUG00000020558	im:7138535	75	33.935	MGP_CAROLIEiJ_G0029473	Fam98c	96	40.876	Mus_caroli
ENSSDUG00000020558	im:7138535	75	33.935	ENSMUSG00000030590	Fam98c	96	40.876	Mus_musculus
ENSSDUG00000020558	im:7138535	73	34.201	MGP_PahariEiJ_G0012707	Fam98c	96	40.146	Mus_pahari
ENSSDUG00000020558	im:7138535	75	34.058	MGP_SPRETEiJ_G0030569	Fam98c	94	31.343	Mus_spretus
ENSSDUG00000020558	im:7138535	76	33.574	ENSMPUG00000017827	FAM98C	67	33.459	Mustela_putorius_furo
ENSSDUG00000020558	im:7138535	78	30.169	ENSMLUG00000002455	FAM98A	57	31.627	Myotis_lucifugus
ENSSDUG00000020558	im:7138535	55	38.049	ENSNGAG00000023101	Fam98c	56	37.688	Nannospalax_galili
ENSSDUG00000020558	im:7138535	93	65.839	ENSNBRG00000008282	-	98	65.282	Neolamprologus_brichardi
ENSSDUG00000020558	im:7138535	70	32.296	ENSOPRG00000008937	FAM98C	66	32.296	Ochotona_princeps
ENSSDUG00000020558	im:7138535	93	67.702	ENSONIG00000008152	-	96	67.062	Oreochromis_niloticus
ENSSDUG00000020558	im:7138535	91	30.904	ENSONIG00000001415	fam98b	58	33.846	Oreochromis_niloticus
ENSSDUG00000020558	im:7138535	92	70.533	ENSONIG00000006268	-	98	68.843	Oreochromis_niloticus
ENSSDUG00000020558	im:7138535	61	34.247	ENSORLG00000012990	fam98b	91	31.549	Oryzias_latipes
ENSSDUG00000020558	im:7138535	100	64.470	ENSORLG00000007729	-	98	65.192	Oryzias_latipes
ENSSDUG00000020558	im:7138535	100	65.043	ENSORLG00020021618	-	98	65.487	Oryzias_latipes_hni
ENSSDUG00000020558	im:7138535	61	33.790	ENSORLG00020017980	fam98b	91	30.704	Oryzias_latipes_hni
ENSSDUG00000020558	im:7138535	100	65.418	ENSORLG00015002830	-	98	65.875	Oryzias_latipes_hsok
ENSSDUG00000020558	im:7138535	97	65.373	ENSOMEG00000016172	im:7138535	97	65.373	Oryzias_melastigma
ENSSDUG00000020558	im:7138535	71	34.100	ENSOGAG00000025904	FAM98C	67	34.100	Otolemur_garnettii
ENSSDUG00000020558	im:7138535	68	33.465	ENSOARG00000005634	FAM98C	69	33.579	Ovis_aries
ENSSDUG00000020558	im:7138535	69	32.296	ENSPPAG00000043372	FAM98C	69	31.343	Pan_paniscus
ENSSDUG00000020558	im:7138535	98	31.053	ENSPPRG00000010257	FAM98C	97	30.481	Panthera_pardus
ENSSDUG00000020558	im:7138535	69	32.296	ENSPTRG00000010929	FAM98C	69	31.343	Pan_troglodytes
ENSSDUG00000020558	im:7138535	69	32.296	ENSPTRG00000049914	-	69	31.343	Pan_troglodytes
ENSSDUG00000020558	im:7138535	50	36.898	ENSPANG00000007584	FAM98C	69	31.343	Papio_anubis
ENSSDUG00000020558	im:7138535	78	30.743	ENSPKIG00000009038	fam98a	62	31.965	Paramormyrops_kingsleyae
ENSSDUG00000020558	im:7138535	75	33.094	ENSPKIG00000022087	FAM98B	79	33.094	Paramormyrops_kingsleyae
ENSSDUG00000020558	im:7138535	91	50.621	ENSPKIG00000017343	im:7138535	98	50.585	Paramormyrops_kingsleyae
ENSSDUG00000020558	im:7138535	98	51.312	ENSPMGG00000021240	-	98	51.603	Periophthalmus_magnuspinnatus
ENSSDUG00000020558	im:7138535	100	67.898	ENSPFOG00000015605	im:7138535	96	67.836	Poecilia_formosa
ENSSDUG00000020558	im:7138535	91	31.176	ENSPFOG00000014774	fam98b	85	31.534	Poecilia_formosa
ENSSDUG00000020558	im:7138535	100	68.182	ENSPLAG00000001683	im:7138535	98	68.129	Poecilia_latipinna
ENSSDUG00000020558	im:7138535	91	31.176	ENSPLAG00000020372	fam98b	86	31.534	Poecilia_latipinna
ENSSDUG00000020558	im:7138535	100	68.286	ENSPMEG00000014084	im:7138535	98	68.235	Poecilia_mexicana
ENSSDUG00000020558	im:7138535	91	31.176	ENSPMEG00000010960	fam98b	86	31.534	Poecilia_mexicana
ENSSDUG00000020558	im:7138535	100	68.946	ENSPREG00000022142	-	98	68.915	Poecilia_reticulata
ENSSDUG00000020558	im:7138535	91	30.882	ENSPREG00000007461	fam98b	82	31.250	Poecilia_reticulata
ENSSDUG00000020558	im:7138535	70	30.153	ENSPREG00000017792	fam98a	55	31.741	Poecilia_reticulata
ENSSDUG00000020558	im:7138535	64	30.000	ENSPCOG00000025891	FAM98B	66	32.432	Propithecus_coquereli
ENSSDUG00000020558	im:7138535	83	30.990	ENSPCOG00000021155	FAM98A	58	31.024	Propithecus_coquereli
ENSSDUG00000020558	im:7138535	73	33.456	ENSPCOG00000024380	FAM98C	71	33.210	Propithecus_coquereli
ENSSDUG00000020558	im:7138535	62	58.796	ENSPNYG00000003712	-	88	56.682	Pundamilia_nyererei
ENSSDUG00000020558	im:7138535	91	31.429	ENSPNAG00000008893	fam98b	85	31.111	Pygocentrus_nattereri
ENSSDUG00000020558	im:7138535	78	30.068	ENSPNAG00000011154	fam98a	55	32.110	Pygocentrus_nattereri
ENSSDUG00000020558	im:7138535	98	52.507	ENSPNAG00000019766	im:7138535	97	52.507	Pygocentrus_nattereri
ENSSDUG00000020558	im:7138535	75	34.545	ENSRNOG00000024036	Fam98c	71	34.201	Rattus_norvegicus
ENSSDUG00000020558	im:7138535	50	36.898	ENSRBIG00000036368	-	64	36.898	Rhinopithecus_bieti
ENSSDUG00000020558	im:7138535	69	32.157	ENSRROG00000017020	FAM98C	69	31.343	Rhinopithecus_roxellana
ENSSDUG00000020558	im:7138535	51	36.458	ENSSBOG00000034217	FAM98C	64	36.458	Saimiri_boliviensis_boliviensis
ENSSDUG00000020558	im:7138535	55	35.437	ENSSHAG00000002208	-	79	35.638	Sarcophilus_harrisii
ENSSDUG00000020558	im:7138535	97	50.568	ENSSFOG00015007019	im:7138535	97	50.852	Scleropages_formosus
ENSSDUG00000020558	im:7138535	75	35.915	ENSSFOG00015010673	fam98b	91	32.320	Scleropages_formosus
ENSSDUG00000020558	im:7138535	100	79.202	ENSSMAG00000016618	-	98	79.360	Scophthalmus_maximus
ENSSDUG00000020558	im:7138535	83	31.908	ENSSMAG00000018911	fam98b	80	32.288	Scophthalmus_maximus
ENSSDUG00000020558	im:7138535	100	98.271	ENSSLDG00000016057	-	100	98.271	Seriola_lalandi_dorsalis
ENSSDUG00000020558	im:7138535	83	30.645	ENSSLDG00000007822	fam98b	77	31.515	Seriola_lalandi_dorsalis
ENSSDUG00000020558	im:7138535	91	31.579	ENSSPAG00000015480	fam98b	83	31.534	Stegastes_partitus
ENSSDUG00000020558	im:7138535	98	71.930	ENSSPAG00000004694	im:7138535	97	71.930	Stegastes_partitus
ENSSDUG00000020558	im:7138535	77	33.452	ENSSSCG00000002959	FAM98C	71	32.609	Sus_scrofa
ENSSDUG00000020558	im:7138535	83	32.492	ENSTRUG00000013778	fam98b	89	31.405	Takifugu_rubripes
ENSSDUG00000020558	im:7138535	98	67.059	ENSTRUG00000015519	im:7138535	98	67.059	Takifugu_rubripes
ENSSDUG00000020558	im:7138535	85	32.075	ENSTNIG00000017243	fam98b	83	31.420	Tetraodon_nigroviridis
ENSSDUG00000020558	im:7138535	98	65.588	ENSTNIG00000019278	im:7138535	96	66.471	Tetraodon_nigroviridis
ENSSDUG00000020558	im:7138535	76	34.058	ENSUAMG00000014001	FAM98C	69	32.963	Ursus_americanus
ENSSDUG00000020558	im:7138535	83	31.908	ENSXCOG00000000576	fam98b	76	32.278	Xiphophorus_couchianus
ENSSDUG00000020558	im:7138535	100	66.952	ENSXCOG00000012756	im:7138535	99	68.605	Xiphophorus_couchianus
ENSSDUG00000020558	im:7138535	100	67.143	ENSXMAG00000008723	im:7138535	99	68.805	Xiphophorus_maculatus
ENSSDUG00000020558	im:7138535	91	30.435	ENSXMAG00000010344	fam98b	84	30.812	Xiphophorus_maculatus