EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000020595 (Gene tree)
Gene ID: 111237524
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 708-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 8479 bases
Position: chrBDQW01000917.1:11082-19560
Accession: 111237524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000028547	zf-C2H2	PF00096.26	4.6e-50	1	7
ENSSDUP00000028547	zf-C2H2	PF00096.26	4.6e-50	2	7
ENSSDUP00000028547	zf-C2H2	PF00096.26	4.6e-50	3	7
ENSSDUP00000028547	zf-C2H2	PF00096.26	4.6e-50	4	7
ENSSDUP00000028547	zf-C2H2	PF00096.26	4.6e-50	5	7
ENSSDUP00000028547	zf-C2H2	PF00096.26	4.6e-50	6	7
ENSSDUP00000028547	zf-C2H2	PF00096.26	4.6e-50	7	7
ENSSDUP00000028531	zf-C2H2	PF00096.26	3.2e-32	1	5
ENSSDUP00000028531	zf-C2H2	PF00096.26	3.2e-32	2	5
ENSSDUP00000028531	zf-C2H2	PF00096.26	3.2e-32	3	5
ENSSDUP00000028531	zf-C2H2	PF00096.26	3.2e-32	4	5
ENSSDUP00000028531	zf-C2H2	PF00096.26	3.2e-32	5	5
ENSSDUP00000028564	zf-C2H2	PF00096.26	4.3e-30	1	5
ENSSDUP00000028564	zf-C2H2	PF00096.26	4.3e-30	2	5
ENSSDUP00000028564	zf-C2H2	PF00096.26	4.3e-30	3	5
ENSSDUP00000028564	zf-C2H2	PF00096.26	4.3e-30	4	5
ENSSDUP00000028564	zf-C2H2	PF00096.26	4.3e-30	5	5
ENSSDUP00000028531	zf-met	PF12874.7	3.6e-09	1	3
ENSSDUP00000028531	zf-met	PF12874.7	3.6e-09	2	3
ENSSDUP00000028531	zf-met	PF12874.7	3.6e-09	3	3
ENSSDUP00000028564	zf-met	PF12874.7	2.6e-06	1	2
ENSSDUP00000028564	zf-met	PF12874.7	2.6e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000029039	-	3640	XM_022766648	ENSSDUP00000028547	696 (aa)	XP_022622369	UPI000BBE6E96
ENSSDUT00000029025	-	957	-	ENSSDUP00000028531	318 (aa)	-	-
ENSSDUT00000029058	-	897	-	ENSSDUP00000028564	298 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000020595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020595's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000020595	-	89	50.311	ENSSDUG00000006808	-	91	49.693
ENSSDUG00000020595	-	94	36.090	ENSSDUG00000007752	scrt1b	69	35.821
ENSSDUG00000020595	-	96	38.783	ENSSDUG00000002195	-	95	57.407
ENSSDUG00000020595	-	94	36.719	ENSSDUG00000018060	snai2	64	38.596
ENSSDUG00000020595	-	86	48.276	ENSSDUG00000009534	-	79	46.667
ENSSDUG00000020595	-	83	48.165	ENSSDUG00000015013	-	66	46.939
ENSSDUG00000020595	-	84	41.509	ENSSDUG00000013048	-	65	33.876
ENSSDUG00000020595	-	96	44.898	ENSSDUG00000000909	-	55	44.295
ENSSDUG00000020595	-	90	45.062	ENSSDUG00000004892	-	98	37.681
ENSSDUG00000020595	-	85	48.291	ENSSDUG00000015204	-	93	50.218
ENSSDUG00000020595	-	98	35.976	ENSSDUG00000008329	-	87	45.455
ENSSDUG00000020595	-	85	47.586	ENSSDUG00000023765	-	74	47.656
ENSSDUG00000020595	-	88	43.192	ENSSDUG00000023764	-	95	46.320
ENSSDUG00000020595	-	86	45.270	ENSSDUG00000013904	-	70	45.270
ENSSDUG00000020595	-	91	42.292	ENSSDUG00000015191	-	97	45.484
ENSSDUG00000020595	-	87	47.917	ENSSDUG00000020810	-	75	47.917
ENSSDUG00000020595	-	86	37.402	ENSSDUG00000022412	znf648	73	40.698
ENSSDUG00000020595	-	86	42.424	ENSSDUG00000004089	-	96	44.872
ENSSDUG00000020595	-	85	47.368	ENSSDUG00000004867	-	95	52.174
ENSSDUG00000020595	-	87	37.358	ENSSDUG00000000705	-	63	43.972
ENSSDUG00000020595	-	88	51.176	ENSSDUG00000009425	-	95	51.176
ENSSDUG00000020595	-	88	45.813	ENSSDUG00000009421	-	85	46.377
ENSSDUG00000020595	-	96	37.072	ENSSDUG00000000786	-	98	54.762
ENSSDUG00000020595	-	82	41.593	ENSSDUG00000005323	-	97	41.593
ENSSDUG00000020595	-	96	33.803	ENSSDUG00000000871	-	91	37.607
ENSSDUG00000020595	-	86	34.302	ENSSDUG00000001918	znf366	52	34.348
ENSSDUG00000020595	-	91	36.634	ENSSDUG00000009223	zbtb41	66	32.099
ENSSDUG00000020595	-	87	39.759	ENSSDUG00000011604	gfi1b	53	41.104
ENSSDUG00000020595	-	95	38.571	ENSSDUG00000014540	znf341	52	38.028
ENSSDUG00000020595	-	87	43.787	ENSSDUG00000022035	-	53	43.787
ENSSDUG00000020595	-	97	47.222	ENSSDUG00000009601	-	99	48.016
ENSSDUG00000020595	-	98	48.864	ENSSDUG00000011170	znf236	62	41.600
ENSSDUG00000020595	-	99	45.902	ENSSDUG00000002675	znf646	77	45.902
ENSSDUG00000020595	-	99	35.556	ENSSDUG00000014574	znf526	63	33.333
ENSSDUG00000020595	-	94	43.411	ENSSDUG00000008943	-	98	43.478
ENSSDUG00000020595	-	81	37.405	ENSSDUG00000001637	scrt2	69	37.594
ENSSDUG00000020595	-	97	41.954	ENSSDUG00000022170	zbtb49	53	38.667
ENSSDUG00000020595	-	52	46.552	ENSSDUG00000020419	-	66	46.552
ENSSDUG00000020595	-	89	42.289	ENSSDUG00000020788	-	88	44.344
ENSSDUG00000020595	-	93	42.384	ENSSDUG00000011654	gfi1aa	50	40.476
ENSSDUG00000020595	-	88	46.094	ENSSDUG00000015182	-	66	48.945
ENSSDUG00000020595	-	94	45.000	ENSSDUG00000015622	-	99	45.810
ENSSDUG00000020595	-	91	39.357	ENSSDUG00000016734	-	73	38.267
ENSSDUG00000020595	-	90	34.272	ENSSDUG00000018835	PRDM15	51	32.906
ENSSDUG00000020595	-	90	43.243	ENSSDUG00000022701	znf652	50	43.243
ENSSDUG00000020595	-	84	41.633	ENSSDUG00000002488	-	63	44.105
ENSSDUG00000020595	-	98	48.458	ENSSDUG00000009577	-	83	48.458
ENSSDUG00000020595	-	85	49.254	ENSSDUG00000019911	-	59	42.748
ENSSDUG00000020595	-	89	48.819	ENSSDUG00000015254	-	97	44.335
ENSSDUG00000020595	-	89	44.262	ENSSDUG00000020805	-	88	45.122
ENSSDUG00000020595	-	85	47.024	ENSSDUG00000004650	-	96	50.000
ENSSDUG00000020595	-	91	34.615	ENSSDUG00000003003	znf319b	81	35.398
ENSSDUG00000020595	-	95	40.094	ENSSDUG00000020397	prdm5	81	39.367
ENSSDUG00000020595	-	96	44.538	ENSSDUG00000000946	-	98	46.725
ENSSDUG00000020595	-	89	43.147	ENSSDUG00000006426	-	95	45.833
ENSSDUG00000020595	-	95	44.253	ENSSDUG00000011244	-	93	44.086
ENSSDUG00000020595	-	87	41.016	ENSSDUG00000015159	-	86	42.678
ENSSDUG00000020595	-	86	42.128	ENSSDUG00000000799	-	95	34.356
ENSSDUG00000020595	-	88	40.541	ENSSDUG00000006463	-	88	40.541
ENSSDUG00000020595	-	96	42.917	ENSSDUG00000000695	-	76	42.917
ENSSDUG00000020595	-	83	32.852	ENSSDUG00000010305	-	67	32.812
ENSSDUG00000020595	-	88	35.374	ENSSDUG00000006740	-	73	36.913
ENSSDUG00000020595	-	92	37.313	ENSSDUG00000019932	ZNF319	88	37.313
ENSSDUG00000020595	-	90	44.444	ENSSDUG00000009439	-	98	45.024
ENSSDUG00000020595	-	77	38.686	ENSSDUG00000000889	-	76	41.111
ENSSDUG00000020595	-	90	42.500	ENSSDUG00000012926	-	84	44.828
ENSSDUG00000020595	-	93	38.075	ENSSDUG00000016450	-	70	40.084
ENSSDUG00000020595	-	86	42.466	ENSSDUG00000009553	-	66	44.186
ENSSDUG00000020595	-	88	35.000	ENSSDUG00000017250	-	65	36.364
ENSSDUG00000020595	-	83	43.333	ENSSDUG00000019933	snai1a	54	43.333
ENSSDUG00000020595	-	85	43.333	ENSSDUG00000000748	sall1b	50	40.299
ENSSDUG00000020595	-	95	45.106	ENSSDUG00000007336	-	98	45.106
ENSSDUG00000020595	-	94	39.113	ENSSDUG00000005401	-	91	47.619
ENSSDUG00000020595	-	92	43.750	ENSSDUG00000022914	-	63	43.750
ENSSDUG00000020595	-	95	42.353	ENSSDUG00000002174	-	77	42.353
ENSSDUG00000020595	-	94	50.000	ENSSDUG00000008682	-	99	50.000
ENSSDUG00000020595	-	77	39.344	ENSSDUG00000013335	-	74	36.000
ENSSDUG00000020595	-	85	44.643	ENSSDUG00000009563	-	80	46.330
ENSSDUG00000020595	-	86	45.732	ENSSDUG00000001263	-	80	45.732
ENSSDUG00000020595	-	97	47.368	ENSSDUG00000004835	-	75	47.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020595	-	97	45.122	ENSACIG00000017647	-	98	45.122	Amphilophus_citrinellus
ENSSDUG00000020595	-	97	42.105	ENSAOCG00000003277	-	79	51.786	Amphiprion_ocellaris
ENSSDUG00000020595	-	100	39.713	ENSAPEG00000016601	-	89	39.713	Amphiprion_percula
ENSSDUG00000020595	-	92	43.972	ENSACLG00000005615	-	62	42.640	Astatotilapia_calliptera
ENSSDUG00000020595	-	99	58.515	ENSACLG00000015989	-	98	59.084	Astatotilapia_calliptera
ENSSDUG00000020595	-	85	44.700	ENSCSAVG00000002179	-	100	44.700	Ciona_savignyi
ENSSDUG00000020595	-	87	43.077	ENSCGRG00001004047	-	65	46.154	Cricetulus_griseus_chok1gshd
ENSSDUG00000020595	-	95	47.248	ENSCSEG00000001771	-	69	47.248	Cynoglossus_semilaevis
ENSSDUG00000020595	-	96	44.309	ENSEBUG00000011244	-	87	44.105	Eptatretus_burgeri
ENSSDUG00000020595	-	87	45.082	ENSEBUG00000002589	-	76	47.887	Eptatretus_burgeri
ENSSDUG00000020595	-	86	44.796	ENSEBUG00000002537	-	88	44.796	Eptatretus_burgeri
ENSSDUG00000020595	-	89	44.550	ENSHBUG00000012758	-	91	45.245	Haplochromis_burtoni
ENSSDUG00000020595	-	92	42.640	ENSHBUG00000020071	-	62	42.640	Haplochromis_burtoni
ENSSDUG00000020595	-	99	58.661	ENSHBUG00000016546	-	98	59.232	Haplochromis_burtoni
ENSSDUG00000020595	-	99	58.515	ENSMZEG00005027844	-	98	59.084	Maylandia_zebra
ENSSDUG00000020595	-	92	40.467	ENSMZEG00005020731	-	89	40.467	Maylandia_zebra
ENSSDUG00000020595	-	86	43.775	MGP_CAROLIEiJ_G0029612	Zfp141	58	47.590	Mus_caroli
ENSSDUG00000020595	-	86	43.981	ENSMUSG00000092416	Zfp141	58	48.795	Mus_musculus
ENSSDUG00000020595	-	84	48.795	MGP_SPRETEiJ_G0030709	-	85	48.795	Mus_spretus
ENSSDUG00000020595	-	82	45.294	ENSNBRG00000023229	-	80	46.448	Neolamprologus_brichardi
ENSSDUG00000020595	-	90	48.387	ENSONIG00000006238	-	100	48.387	Oreochromis_niloticus
ENSSDUG00000020595	-	86	43.426	ENSONIG00000018188	-	100	43.426	Oreochromis_niloticus
ENSSDUG00000020595	-	92	59.854	ENSONIG00000014100	-	96	61.339	Oreochromis_niloticus
ENSSDUG00000020595	-	92	44.828	ENSPFOG00000007708	-	99	42.604	Poecilia_formosa
ENSSDUG00000020595	-	93	36.735	ENSPLAG00000010448	-	62	41.346	Poecilia_latipinna
ENSSDUG00000020595	-	85	41.036	ENSPCAG00000001613	-	75	42.731	Procavia_capensis
ENSSDUG00000020595	-	99	58.079	ENSPNYG00000005671	-	98	58.641	Pundamilia_nyererei
ENSSDUG00000020595	-	93	46.256	ENSPNAG00000015131	-	96	46.256	Pygocentrus_nattereri
ENSSDUG00000020595	-	93	48.178	ENSSFOG00015000652	ZNF775	84	48.996	Scleropages_formosus
ENSSDUG00000020595	-	86	45.614	ENSSPUG00000007064	-	99	47.030	Sphenodon_punctatus
ENSSDUG00000020595	-	86	42.735	ENSSPUG00000007092	-	50	42.735	Sphenodon_punctatus
ENSSDUG00000020595	-	85	41.985	ENSSPAG00000009587	-	96	41.975	Stegastes_partitus
ENSSDUG00000020595	-	87	37.879	ENSSSCG00000032098	-	92	37.377	Sus_scrofa
ENSSDUG00000020595	-	84	44.928	ENSTTRG00000004891	-	68	44.928	Tursiops_truncatus
ENSSDUG00000020595	-	99	38.384	ENSXETG00000015125	-	98	40.476	Xenopus_tropicalis
ENSSDUG00000020595	-	85	45.128	ENSXETG00000030967	-	94	46.667	Xenopus_tropicalis