EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000020645 (Gene tree)
Gene ID: 111237530
Gene Symbol: rbm46
Alias: fe11d09|wu:fe11d09|zgc:153695
Full Name: probable RNA-binding protein 46
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 18211 bases
Position: chrBDQW01000917.1:202916-221126
Accession: 111237530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000028629	DND1_DSRM	PF14709.7	4.9e-20	1	1
ENSSDUP00000028606	DND1_DSRM	PF14709.7	8.3e-20	1	1
ENSSDUP00000028629	RRM_1	PF00076.22	1.8e-35	1	3
ENSSDUP00000028629	RRM_1	PF00076.22	1.8e-35	2	3
ENSSDUP00000028629	RRM_1	PF00076.22	1.8e-35	3	3
ENSSDUP00000028606	RRM_1	PF00076.22	6.5e-35	1	3
ENSSDUP00000028606	RRM_1	PF00076.22	6.5e-35	2	3
ENSSDUP00000028606	RRM_1	PF00076.22	6.5e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000029122	-	1491	-	ENSSDUP00000028629	496 (aa)	-	-
ENSSDUT00000029099	-	5970	XM_022766657	ENSSDUP00000028606	681 (aa)	XP_022622378	-

Gene Model

Click here to download ENSSDUG00000020645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020645's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000020645	rbm46	88	64.931	ENSSDUG00000013930	a1cf	85	63.192
ENSSDUG00000020645	rbm46	59	68.136	ENSSDUG00000022684	rbm47	50	67.119
ENSSDUG00000020645	rbm46	58	55.172	ENSSDUG00000017716	syncripl	52	54.483

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020645	rbm46	91	64.693	ENSG00000151962	RBM46	92	82.114	Homo_sapiens
ENSSDUG00000020645	rbm46	89	81.996	ENSAPOG00000009209	rbm46	95	77.246	Acanthochromis_polyacanthus
ENSSDUG00000020645	rbm46	89	66.739	ENSAMEG00000013290	RBM46	86	66.739	Ailuropoda_melanoleuca
ENSSDUG00000020645	rbm46	91	77.538	ENSACIG00000014500	rbm46	88	88.562	Amphilophus_citrinellus
ENSSDUG00000020645	rbm46	88	85.877	ENSAOCG00000001892	-	93	82.609	Amphiprion_ocellaris
ENSSDUG00000020645	rbm46	88	85.877	ENSAPEG00000017762	rbm46	97	87.037	Amphiprion_percula
ENSSDUG00000020645	rbm46	93	83.983	ENSATEG00000010775	rbm46	90	91.111	Anabas_testudineus
ENSSDUG00000020645	rbm46	88	67.473	ENSAPLG00000005116	RBM46	97	67.473	Anas_platyrhynchos
ENSSDUG00000020645	rbm46	89	67.568	ENSACAG00000015599	RBM46	85	67.568	Anolis_carolinensis
ENSSDUG00000020645	rbm46	91	64.905	ENSANAG00000029193	RBM46	97	66.307	Aotus_nancymaae
ENSSDUG00000020645	rbm46	96	76.494	ENSACLG00000016153	rbm46	90	79.478	Astatotilapia_calliptera
ENSSDUG00000020645	rbm46	87	65.733	ENSAMXG00000020892	-	91	64.257	Astyanax_mexicanus
ENSSDUG00000020645	rbm46	87	72.286	ENSAMXG00000009397	rbm46	97	72.286	Astyanax_mexicanus
ENSSDUG00000020645	rbm46	89	67.031	ENSBTAG00000001696	RBM46	94	66.957	Bos_taurus
ENSSDUG00000020645	rbm46	90	65.598	ENSCJAG00000001768	RBM46	98	65.806	Callithrix_jacchus
ENSSDUG00000020645	rbm46	89	67.031	ENSCAFG00000008473	RBM46	94	66.957	Canis_familiaris
ENSSDUG00000020645	rbm46	89	67.031	ENSCAFG00020002468	RBM46	93	66.739	Canis_lupus_dingo
ENSSDUG00000020645	rbm46	89	67.174	ENSCHIG00000000502	RBM46	94	67.174	Capra_hircus
ENSSDUG00000020645	rbm46	89	67.538	ENSTSYG00000010435	RBM46	97	67.756	Carlito_syrichta
ENSSDUG00000020645	rbm46	89	65.944	ENSCAPG00000011928	-	94	65.944	Cavia_aperea
ENSSDUG00000020645	rbm46	58	81.185	ENSCAPG00000011841	-	79	79.522	Cavia_aperea
ENSSDUG00000020645	rbm46	89	66.017	ENSCPOG00000010284	-	97	66.017	Cavia_porcellus
ENSSDUG00000020645	rbm46	86	67.338	ENSCPOG00000020396	-	90	66.154	Cavia_porcellus
ENSSDUG00000020645	rbm46	89	63.420	ENSCPOG00000019272	-	92	58.541	Cavia_porcellus
ENSSDUG00000020645	rbm46	89	55.531	ENSCCAG00000001323	-	95	55.531	Cebus_capucinus
ENSSDUG00000020645	rbm46	89	66.307	ENSCCAG00000027619	-	97	66.307	Cebus_capucinus
ENSSDUG00000020645	rbm46	89	65.875	ENSCATG00000040148	RBM46	97	65.875	Cercocebus_atys
ENSSDUG00000020645	rbm46	89	66.450	ENSCLAG00000005846	-	97	66.450	Chinchilla_lanigera
ENSSDUG00000020645	rbm46	86	67.627	ENSCLAG00000011886	-	86	67.406	Chinchilla_lanigera
ENSSDUG00000020645	rbm46	89	66.017	ENSCSAG00000003263	RBM46	91	61.811	Chlorocebus_sabaeus
ENSSDUG00000020645	rbm46	89	66.594	ENSCHOG00000003429	RBM46	86	66.594	Choloepus_hoffmanni
ENSSDUG00000020645	rbm46	84	66.895	ENSCPBG00000009314	RBM46	95	66.895	Chrysemys_picta_bellii
ENSSDUG00000020645	rbm46	89	66.091	ENSCANG00000039065	RBM46	97	66.091	Colobus_angolensis_palliatus
ENSSDUG00000020645	rbm46	89	67.320	ENSCGRG00001016714	Rbm46	97	67.320	Cricetulus_griseus_chok1gshd
ENSSDUG00000020645	rbm46	89	67.320	ENSCGRG00000011738	Rbm46	97	67.320	Cricetulus_griseus_crigri
ENSSDUG00000020645	rbm46	89	67.634	ENSCSEG00000005530	rbm46	98	67.634	Cynoglossus_semilaevis
ENSSDUG00000020645	rbm46	88	75.893	ENSCVAG00000021013	rbm46	94	75.893	Cyprinodon_variegatus
ENSSDUG00000020645	rbm46	89	70.241	ENSDARG00000079452	rbm46	93	66.272	Danio_rerio
ENSSDUG00000020645	rbm46	89	67.686	ENSDNOG00000016195	RBM46	86	67.686	Dasypus_novemcinctus
ENSSDUG00000020645	rbm46	89	66.307	ENSDORG00000006405	Rbm46	97	66.307	Dipodomys_ordii
ENSSDUG00000020645	rbm46	89	67.031	ENSETEG00000014902	RBM46	86	66.594	Echinops_telfairi
ENSSDUG00000020645	rbm46	89	66.523	ENSEASG00005015821	RBM46	92	60.769	Equus_asinus_asinus
ENSSDUG00000020645	rbm46	89	66.523	ENSECAG00000007649	RBM46	94	66.523	Equus_caballus
ENSSDUG00000020645	rbm46	91	63.347	ENSEEUG00000011824	RBM46	92	59.038	Erinaceus_europaeus
ENSSDUG00000020645	rbm46	76	72.680	ENSELUG00000008166	rbm46	99	72.680	Esox_lucius
ENSSDUG00000020645	rbm46	92	65.823	ENSFCAG00000029812	RBM46	98	66.955	Felis_catus
ENSSDUG00000020645	rbm46	89	65.293	ENSFALG00000013157	RBM46	90	65.293	Ficedula_albicollis
ENSSDUG00000020645	rbm46	89	64.147	ENSFDAG00000019281	-	91	60.433	Fukomys_damarensis
ENSSDUG00000020645	rbm46	86	65.410	ENSFDAG00000006445	-	90	64.551	Fukomys_damarensis
ENSSDUG00000020645	rbm46	76	78.158	ENSFHEG00000013257	rbm46	87	78.158	Fundulus_heteroclitus
ENSSDUG00000020645	rbm46	89	61.438	ENSGALG00000009278	RBM46	96	61.438	Gallus_gallus
ENSSDUG00000020645	rbm46	67	91.000	ENSGAFG00000020245	rbm46	90	79.508	Gambusia_affinis
ENSSDUG00000020645	rbm46	92	65.336	ENSGAGG00000002019	RBM46	87	67.028	Gopherus_agassizii
ENSSDUG00000020645	rbm46	91	64.693	ENSGGOG00000001876	RBM46	97	66.091	Gorilla_gorilla
ENSSDUG00000020645	rbm46	92	75.817	ENSHBUG00000009609	rbm46	98	78.747	Haplochromis_burtoni
ENSSDUG00000020645	rbm46	89	55.876	ENSHGLG00000002940	-	84	64.331	Heterocephalus_glaber_female
ENSSDUG00000020645	rbm46	82	60.095	ENSHGLG00000010742	-	82	59.102	Heterocephalus_glaber_female
ENSSDUG00000020645	rbm46	85	66.287	ENSHGLG00000002463	-	97	67.371	Heterocephalus_glaber_female
ENSSDUG00000020645	rbm46	89	52.941	ENSHGLG00100018987	-	94	48.077	Heterocephalus_glaber_male
ENSSDUG00000020645	rbm46	82	60.095	ENSHGLG00100004977	-	82	59.102	Heterocephalus_glaber_male
ENSSDUG00000020645	rbm46	89	65.801	ENSHGLG00100012752	-	97	65.801	Heterocephalus_glaber_male
ENSSDUG00000020645	rbm46	90	55.357	ENSHCOG00000012998	rbm46	92	55.188	Hippocampus_comes
ENSSDUG00000020645	rbm46	90	67.629	ENSIPUG00000024038	rbm46	96	68.607	Ictalurus_punctatus
ENSSDUG00000020645	rbm46	89	67.102	ENSSTOG00000007918	RBM46	97	67.028	Ictidomys_tridecemlineatus
ENSSDUG00000020645	rbm46	88	68.282	ENSJJAG00000003902	Rbm46	97	68.282	Jaculus_jaculus
ENSSDUG00000020645	rbm46	91	83.333	ENSKMAG00000015127	rbm46	87	82.819	Kryptolebias_marmoratus
ENSSDUG00000020645	rbm46	87	68.653	ENSLACG00000002062	RBM46	92	61.923	Latimeria_chalumnae
ENSSDUG00000020645	rbm46	87	70.156	ENSLOCG00000008298	rbm46	95	70.721	Lepisosteus_oculatus
ENSSDUG00000020645	rbm46	89	67.102	ENSLAFG00000015448	RBM46	98	67.028	Loxodonta_africana
ENSSDUG00000020645	rbm46	89	66.091	ENSMFAG00000043485	RBM46	97	66.091	Macaca_fascicularis
ENSSDUG00000020645	rbm46	89	66.017	ENSMMUG00000021147	RBM46	94	66.017	Macaca_mulatta
ENSSDUG00000020645	rbm46	89	66.091	ENSMNEG00000002787	RBM46	97	66.091	Macaca_nemestrina
ENSSDUG00000020645	rbm46	89	65.875	ENSMLEG00000029756	RBM46	97	65.875	Mandrillus_leucophaeus
ENSSDUG00000020645	rbm46	88	85.393	ENSMAMG00000009093	rbm46	89	85.393	Mastacembelus_armatus
ENSSDUG00000020645	rbm46	94	74.949	ENSMZEG00005027849	rbm46	94	81.839	Maylandia_zebra
ENSSDUG00000020645	rbm46	89	62.092	ENSMGAG00000001457	RBM46	97	62.092	Meleagris_gallopavo
ENSSDUG00000020645	rbm46	89	67.467	ENSMAUG00000009911	Rbm46	97	67.320	Mesocricetus_auratus
ENSSDUG00000020645	rbm46	89	66.091	ENSMICG00000042747	RBM46	97	66.091	Microcebus_murinus
ENSSDUG00000020645	rbm46	89	67.538	ENSMOCG00000001188	Rbm46	97	67.538	Microtus_ochrogaster
ENSSDUG00000020645	rbm46	94	77.433	ENSMMOG00000011214	rbm46	90	77.966	Mola_mola
ENSSDUG00000020645	rbm46	89	67.609	ENSMODG00000001302	RBM46	78	67.609	Monodelphis_domestica
ENSSDUG00000020645	rbm46	88	78.348	ENSMALG00000006185	rbm46	96	79.101	Monopterus_albus
ENSSDUG00000020645	rbm46	89	67.467	MGP_CAROLIEiJ_G0025101	Rbm46	97	67.320	Mus_caroli
ENSSDUG00000020645	rbm46	89	67.538	ENSMUSG00000033882	Rbm46	97	67.538	Mus_musculus
ENSSDUG00000020645	rbm46	89	66.307	MGP_PahariEiJ_G0026544	Rbm46	97	66.307	Mus_pahari
ENSSDUG00000020645	rbm46	89	67.904	MGP_SPRETEiJ_G0026043	Rbm46	97	67.756	Mus_spretus
ENSSDUG00000020645	rbm46	89	67.031	ENSMPUG00000005670	RBM46	94	66.957	Mustela_putorius_furo
ENSSDUG00000020645	rbm46	89	67.320	ENSMLUG00000003221	RBM46	86	67.320	Myotis_lucifugus
ENSSDUG00000020645	rbm46	89	67.102	ENSNGAG00000004231	Rbm46	97	67.102	Nannospalax_galili
ENSSDUG00000020645	rbm46	92	80.879	ENSNBRG00000000273	rbm46	89	86.850	Neolamprologus_brichardi
ENSSDUG00000020645	rbm46	91	64.632	ENSNLEG00000006184	RBM46	97	65.875	Nomascus_leucogenys
ENSSDUG00000020645	rbm46	80	67.303	ENSMEUG00000013328	RBM46	99	66.828	Notamacropus_eugenii
ENSSDUG00000020645	rbm46	55	78.022	ENSOPRG00000007136	RBM46	96	79.121	Ochotona_princeps
ENSSDUG00000020645	rbm46	91	65.678	ENSODEG00000000735	-	97	66.883	Octodon_degus
ENSSDUG00000020645	rbm46	86	68.000	ENSODEG00000018002	-	88	66.740	Octodon_degus
ENSSDUG00000020645	rbm46	88	76.316	ENSONIG00000014096	rbm46	97	78.319	Oreochromis_niloticus
ENSSDUG00000020645	rbm46	95	63.450	ENSOANG00000002141	RBM46	95	65.665	Ornithorhynchus_anatinus
ENSSDUG00000020645	rbm46	89	66.234	ENSOCUG00000017859	RBM46	92	60.962	Oryctolagus_cuniculus
ENSSDUG00000020645	rbm46	94	71.186	ENSORLG00000002429	rbm46	91	74.157	Oryzias_latipes
ENSSDUG00000020645	rbm46	89	72.331	ENSORLG00020022154	rbm46	90	70.135	Oryzias_latipes_hni
ENSSDUG00000020645	rbm46	94	72.246	ENSORLG00015020234	rbm46	94	72.318	Oryzias_latipes_hsok
ENSSDUG00000020645	rbm46	86	71.365	ENSOMEG00000022580	rbm46	98	66.359	Oryzias_melastigma
ENSSDUG00000020645	rbm46	89	67.031	ENSOGAG00000005647	RBM46	86	67.031	Otolemur_garnettii
ENSSDUG00000020645	rbm46	89	67.249	ENSOARG00000016406	RBM46	94	67.174	Ovis_aries
ENSSDUG00000020645	rbm46	89	66.091	ENSPPAG00000043236	RBM46	97	66.091	Pan_paniscus
ENSSDUG00000020645	rbm46	90	66.309	ENSPPRG00000009416	RBM46	98	66.739	Panthera_pardus
ENSSDUG00000020645	rbm46	90	66.309	ENSPTIG00000017449	RBM46	98	66.739	Panthera_tigris_altaica
ENSSDUG00000020645	rbm46	89	66.091	ENSPTRG00000016538	RBM46	97	66.091	Pan_troglodytes
ENSSDUG00000020645	rbm46	89	66.091	ENSPANG00000004186	RBM46	97	66.091	Papio_anubis
ENSSDUG00000020645	rbm46	87	69.401	ENSPKIG00000015334	rbm46	81	67.695	Paramormyrops_kingsleyae
ENSSDUG00000020645	rbm46	89	65.944	ENSPSIG00000006429	RBM46	93	65.944	Pelodiscus_sinensis
ENSSDUG00000020645	rbm46	91	74.945	ENSPMGG00000019872	rbm46	91	91.544	Periophthalmus_magnuspinnatus
ENSSDUG00000020645	rbm46	89	67.320	ENSPEMG00000013899	Rbm46	97	67.320	Peromyscus_maniculatus_bairdii
ENSSDUG00000020645	rbm46	89	67.826	ENSPCIG00000029626	RBM46	94	67.826	Phascolarctos_cinereus
ENSSDUG00000020645	rbm46	89	65.725	ENSPFOG00000001079	rbm46	77	90.323	Poecilia_formosa
ENSSDUG00000020645	rbm46	92	80.086	ENSPLAG00000004541	rbm46	92	76.838	Poecilia_latipinna
ENSSDUG00000020645	rbm46	92	80.086	ENSPMEG00000015724	rbm46	93	82.500	Poecilia_mexicana
ENSSDUG00000020645	rbm46	92	80.086	ENSPREG00000014464	rbm46	97	80.931	Poecilia_reticulata
ENSSDUG00000020645	rbm46	89	66.017	ENSPPYG00000015144	RBM46	92	60.577	Pongo_abelii
ENSSDUG00000020645	rbm46	91	62.260	ENSPCAG00000003110	RBM46	92	58.654	Procavia_capensis
ENSSDUG00000020645	rbm46	90	64.957	ENSPCOG00000024347	RBM46	98	65.376	Propithecus_coquereli
ENSSDUG00000020645	rbm46	89	67.031	ENSPVAG00000008376	RBM46	86	67.031	Pteropus_vampyrus
ENSSDUG00000020645	rbm46	87	71.490	ENSPNAG00000025312	rbm46	91	70.648	Pygocentrus_nattereri
ENSSDUG00000020645	rbm46	89	67.467	ENSRNOG00000025823	Rbm46	86	67.249	Rattus_norvegicus
ENSSDUG00000020645	rbm46	89	65.875	ENSRBIG00000032583	RBM46	97	65.875	Rhinopithecus_bieti
ENSSDUG00000020645	rbm46	89	65.659	ENSRROG00000044288	RBM46	97	65.659	Rhinopithecus_roxellana
ENSSDUG00000020645	rbm46	89	66.091	ENSSBOG00000033028	RBM46	97	66.091	Saimiri_boliviensis_boliviensis
ENSSDUG00000020645	rbm46	89	67.609	ENSSHAG00000012596	RBM46	86	67.609	Sarcophilus_harrisii
ENSSDUG00000020645	rbm46	88	68.750	ENSSFOG00015000087	rbm46	88	65.844	Scleropages_formosus
ENSSDUG00000020645	rbm46	87	78.522	ENSSMAG00000017042	rbm46	93	78.522	Scophthalmus_maximus
ENSSDUG00000020645	rbm46	89	66.594	ENSSARG00000006520	RBM46	91	61.811	Sorex_araneus
ENSSDUG00000020645	rbm46	89	67.896	ENSSPUG00000012525	-	85	68.043	Sphenodon_punctatus
ENSSDUG00000020645	rbm46	90	66.667	ENSSPUG00000004773	-	96	66.883	Sphenodon_punctatus
ENSSDUG00000020645	rbm46	89	79.186	ENSSPAG00000013697	rbm46	96	79.186	Stegastes_partitus
ENSSDUG00000020645	rbm46	92	65.466	ENSSSCG00000008994	RBM46	94	66.522	Sus_scrofa
ENSSDUG00000020645	rbm46	86	66.219	ENSTGUG00000005307	RBM46	95	66.219	Taeniopygia_guttata
ENSSDUG00000020645	rbm46	93	77.970	ENSTRUG00000004237	rbm46	95	78.728	Takifugu_rubripes
ENSSDUG00000020645	rbm46	89	74.672	ENSTNIG00000008714	rbm46	97	68.275	Tetraodon_nigroviridis
ENSSDUG00000020645	rbm46	91	63.636	ENSTBEG00000013949	RBM46	92	59.203	Tupaia_belangeri
ENSSDUG00000020645	rbm46	89	67.387	ENSTTRG00000001239	RBM46	92	62.718	Tursiops_truncatus
ENSSDUG00000020645	rbm46	89	67.031	ENSUAMG00000026593	RBM46	94	66.957	Ursus_americanus
ENSSDUG00000020645	rbm46	89	66.739	ENSUMAG00000016442	RBM46	94	66.957	Ursus_maritimus
ENSSDUG00000020645	rbm46	89	67.102	ENSVVUG00000024957	RBM46	97	67.028	Vulpes_vulpes
ENSSDUG00000020645	rbm46	63	64.650	ENSXETG00000032067	-	84	63.407	Xenopus_tropicalis
ENSSDUG00000020645	rbm46	90	44.351	ENSXETG00000032344	-	89	43.478	Xenopus_tropicalis
ENSSDUG00000020645	rbm46	90	62.876	ENSXETG00000022412	-	89	60.040	Xenopus_tropicalis
ENSSDUG00000020645	rbm46	88	78.091	ENSXMAG00000008237	rbm46	91	78.261	Xiphophorus_maculatus