EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000020690 (Gene tree)
Gene ID: 111216577
Gene Symbol: smarca5
Alias: SWI/SNF related|matrix associated|actin dependent regulator of chromatin A5|chunp6878|fb26d12|fb49g04|im:7146484|wu:fb26d12|wu:fb49g04|zgc:158434
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 11153 bases
Position: chrBDQW01000035.1:5558046-5569198
Accession: 111216577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000028671	ResIII	PF04851.15	3.6e-11	1	1
ENSSDUP00000028671	DEAD	PF00270.29	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000029165	-	6756	XM_022738126	ENSSDUP00000028671	1032 (aa)	XP_022593847	UPI000BBE1D2E

Gene Model

Click here to download ENSSDUG00000020690's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020690's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000020690	smarca5	53	41.894	ENSSDUG00000019831	chd1l	61	42.077
ENSSDUG00000020690	smarca5	53	40.800	ENSSDUG00000016924	hells	80	40.480

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020690	smarca5	96	82.525	ENSG00000102038	SMARCA1	93	83.198	Homo_sapiens
ENSSDUG00000020690	smarca5	100	97.973	ENSAPOG00000016035	smarca5	100	97.973	Acanthochromis_polyacanthus
ENSSDUG00000020690	smarca5	96	81.637	ENSAMEG00000015218	SMARCA1	93	82.193	Ailuropoda_melanoleuca
ENSSDUG00000020690	smarca5	87	97.669	ENSACIG00000016982	smarca5	100	97.669	Amphilophus_citrinellus
ENSSDUG00000020690	smarca5	100	97.973	ENSAOCG00000015578	smarca5	100	97.973	Amphiprion_ocellaris
ENSSDUG00000020690	smarca5	100	97.973	ENSAPEG00000011117	smarca5	100	97.973	Amphiprion_percula
ENSSDUG00000020690	smarca5	100	97.971	ENSATEG00000012894	smarca5	100	97.971	Anabas_testudineus
ENSSDUG00000020690	smarca5	95	83.809	ENSAPLG00000013149	SMARCA1	99	83.809	Anas_platyrhynchos
ENSSDUG00000020690	smarca5	95	83.891	ENSACAG00000011376	SMARCA1	94	84.216	Anolis_carolinensis
ENSSDUG00000020690	smarca5	96	77.778	ENSANAG00000023098	SMARCA1	93	78.411	Aotus_nancymaae
ENSSDUG00000020690	smarca5	100	97.297	ENSACLG00000025356	smarca5	100	97.297	Astatotilapia_calliptera
ENSSDUG00000020690	smarca5	100	91.530	ENSAMXG00000005709	smarca5	100	91.225	Astyanax_mexicanus
ENSSDUG00000020690	smarca5	90	84.425	ENSAMXG00000011227	smarca1	99	85.525	Astyanax_mexicanus
ENSSDUG00000020690	smarca5	95	82.875	ENSBTAG00000002292	SMARCA1	91	83.141	Bos_taurus
ENSSDUG00000020690	smarca5	95	63.454	WBGene00002169	isw-1	95	63.674	Caenorhabditis_elegans
ENSSDUG00000020690	smarca5	96	82.745	ENSCJAG00000002868	SMARCA1	93	83.198	Callithrix_jacchus
ENSSDUG00000020690	smarca5	96	73.684	ENSCAFG00000018673	SMARCA1	99	75.176	Canis_familiaris
ENSSDUG00000020690	smarca5	96	82.727	ENSCAFG00020001751	SMARCA1	93	83.299	Canis_lupus_dingo
ENSSDUG00000020690	smarca5	95	82.573	ENSCHIG00000009837	SMARCA1	92	82.892	Capra_hircus
ENSSDUG00000020690	smarca5	96	82.727	ENSTSYG00000004240	SMARCA1	94	84.161	Carlito_syrichta
ENSSDUG00000020690	smarca5	96	81.627	ENSCPOG00000013601	SMARCA1	93	82.186	Cavia_porcellus
ENSSDUG00000020690	smarca5	96	79.899	ENSCCAG00000030817	SMARCA1	93	80.550	Cebus_capucinus
ENSSDUG00000020690	smarca5	94	83.644	ENSCATG00000015921	SMARCA1	93	82.193	Cercocebus_atys
ENSSDUG00000020690	smarca5	96	81.919	ENSCLAG00000002171	SMARCA1	93	82.485	Chinchilla_lanigera
ENSSDUG00000020690	smarca5	96	82.525	ENSCSAG00000008460	SMARCA1	93	83.198	Chlorocebus_sabaeus
ENSSDUG00000020690	smarca5	95	83.688	ENSCPBG00000001146	SMARCA1	93	84.012	Chrysemys_picta_bellii
ENSSDUG00000020690	smarca5	96	73.857	ENSCING00000004110	swi/snf	99	73.637	Ciona_intestinalis
ENSSDUG00000020690	smarca5	98	72.665	ENSCSAVG00000004620	-	99	75.615	Ciona_savignyi
ENSSDUG00000020690	smarca5	96	82.626	ENSCANG00000007183	SMARCA1	93	83.299	Colobus_angolensis_palliatus
ENSSDUG00000020690	smarca5	97	80.981	ENSCGRG00001010776	Smarca1	97	79.610	Cricetulus_griseus_chok1gshd
ENSSDUG00000020690	smarca5	95	81.282	ENSCGRG00000015301	Smarca1	94	82.595	Cricetulus_griseus_crigri
ENSSDUG00000020690	smarca5	100	96.712	ENSCSEG00000000328	smarca5	100	96.712	Cynoglossus_semilaevis
ENSSDUG00000020690	smarca5	100	96.522	ENSCVAG00000008668	smarca5	100	96.522	Cyprinodon_variegatus
ENSSDUG00000020690	smarca5	100	91.040	ENSDARG00000052348	smarca5	100	90.637	Danio_rerio
ENSSDUG00000020690	smarca5	94	82.849	ENSDARG00000012776	smarca1	96	82.849	Danio_rerio
ENSSDUG00000020690	smarca5	95	82.822	ENSDNOG00000004315	SMARCA1	91	84.093	Dasypus_novemcinctus
ENSSDUG00000020690	smarca5	96	82.093	ENSDORG00000009270	Smarca1	90	84.305	Dipodomys_ordii
ENSSDUG00000020690	smarca5	95	74.597	FBgn0011604	Iswi	99	72.560	Drosophila_melanogaster
ENSSDUG00000020690	smarca5	79	81.818	ENSETEG00000017426	SMARCA1	83	81.818	Echinops_telfairi
ENSSDUG00000020690	smarca5	97	80.933	ENSEBUG00000001239	smarca5	99	80.933	Eptatretus_burgeri
ENSSDUG00000020690	smarca5	96	78.068	ENSEASG00005008218	SMARCA1	99	79.352	Equus_asinus_asinus
ENSSDUG00000020690	smarca5	96	82.626	ENSECAG00000012106	SMARCA1	92	83.198	Equus_caballus
ENSSDUG00000020690	smarca5	77	84.437	ENSEEUG00000014927	SMARCA1	80	84.437	Erinaceus_europaeus
ENSSDUG00000020690	smarca5	94	84.016	ENSELUG00000010515	smarca1	95	85.059	Esox_lucius
ENSSDUG00000020690	smarca5	97	82.036	ENSFCAG00000018496	SMARCA1	93	83.198	Felis_catus
ENSSDUG00000020690	smarca5	88	85.120	ENSFALG00000000209	SMARCA1	98	85.120	Ficedula_albicollis
ENSSDUG00000020690	smarca5	95	81.407	ENSFDAG00000009818	SMARCA1	94	82.723	Fukomys_damarensis
ENSSDUG00000020690	smarca5	100	94.933	ENSFHEG00000007687	smarca5	100	94.455	Fundulus_heteroclitus
ENSSDUG00000020690	smarca5	96	82.863	ENSGALG00000008431	SMARCA1	95	84.807	Gallus_gallus
ENSSDUG00000020690	smarca5	100	96.908	ENSGAFG00000017731	smarca5	100	96.908	Gambusia_affinis
ENSSDUG00000020690	smarca5	94	84.259	ENSGAGG00000023575	SMARCA1	99	84.259	Gopherus_agassizii
ENSSDUG00000020690	smarca5	70	96.000	ENSGGOG00000012841	-	92	79.270	Gorilla_gorilla
ENSSDUG00000020690	smarca5	96	81.717	ENSHGLG00000003080	SMARCA1	93	82.281	Heterocephalus_glaber_female
ENSSDUG00000020690	smarca5	96	81.225	ENSHGLG00100001102	SMARCA1	99	81.781	Heterocephalus_glaber_male
ENSSDUG00000020690	smarca5	100	96.911	ENSHCOG00000005458	smarca5	100	96.911	Hippocampus_comes
ENSSDUG00000020690	smarca5	100	91.191	ENSIPUG00000005229	SMARCA5	99	92.942	Ictalurus_punctatus
ENSSDUG00000020690	smarca5	97	81.962	ENSIPUG00000016905	Smarca1	99	84.119	Ictalurus_punctatus
ENSSDUG00000020690	smarca5	96	82.525	ENSSTOG00000014524	SMARCA1	97	81.437	Ictidomys_tridecemlineatus
ENSSDUG00000020690	smarca5	96	81.206	ENSJJAG00000002593	Smarca1	93	81.763	Jaculus_jaculus
ENSSDUG00000020690	smarca5	100	96.812	ENSKMAG00000003777	smarca5	100	96.812	Kryptolebias_marmoratus
ENSSDUG00000020690	smarca5	100	96.035	ENSLBEG00000018112	smarca5	100	95.938	Labrus_bergylta
ENSSDUG00000020690	smarca5	94	95.902	ENSLBEG00000013295	SMARCA1	100	97.975	Labrus_bergylta
ENSSDUG00000020690	smarca5	94	85.052	ENSLACG00000016697	SMARCA1	95	85.052	Latimeria_chalumnae
ENSSDUG00000020690	smarca5	95	85.408	ENSLOCG00000014591	smarca1	95	85.408	Lepisosteus_oculatus
ENSSDUG00000020690	smarca5	96	81.526	ENSLAFG00000000896	SMARCA1	98	82.085	Loxodonta_africana
ENSSDUG00000020690	smarca5	96	82.525	ENSMFAG00000002117	SMARCA1	94	84.233	Macaca_fascicularis
ENSSDUG00000020690	smarca5	94	83.644	ENSMMUG00000008818	SMARCA1	97	84.452	Macaca_mulatta
ENSSDUG00000020690	smarca5	94	83.644	ENSMNEG00000041768	SMARCA1	94	84.233	Macaca_nemestrina
ENSSDUG00000020690	smarca5	96	82.525	ENSMLEG00000043198	SMARCA1	93	83.198	Mandrillus_leucophaeus
ENSSDUG00000020690	smarca5	100	97.498	ENSMAMG00000014294	smarca5	100	97.498	Mastacembelus_armatus
ENSSDUG00000020690	smarca5	100	97.297	ENSMZEG00005009369	smarca5	100	97.297	Maylandia_zebra
ENSSDUG00000020690	smarca5	95	82.797	ENSMGAG00000007042	SMARCA1	98	82.797	Meleagris_gallopavo
ENSSDUG00000020690	smarca5	94	81.633	ENSMAUG00000008133	Smarca1	93	81.128	Mesocricetus_auratus
ENSSDUG00000020690	smarca5	96	82.929	ENSMICG00000015768	SMARCA1	93	83.503	Microcebus_murinus
ENSSDUG00000020690	smarca5	96	81.106	ENSMOCG00000009464	Smarca1	93	81.662	Microtus_ochrogaster
ENSSDUG00000020690	smarca5	96	96.673	ENSMMOG00000005547	smarca5	99	96.673	Mola_mola
ENSSDUG00000020690	smarca5	94	83.795	ENSMODG00000013187	-	94	83.795	Monodelphis_domestica
ENSSDUG00000020690	smarca5	100	98.162	ENSMALG00000002081	smarca5	100	98.162	Monopterus_albus
ENSSDUG00000020690	smarca5	96	81.307	MGP_CAROLIEiJ_G0033034	Smarca1	92	82.197	Mus_caroli
ENSSDUG00000020690	smarca5	96	81.407	ENSMUSG00000031099	Smarca1	93	81.966	Mus_musculus
ENSSDUG00000020690	smarca5	95	81.579	MGP_PahariEiJ_G0031579	Smarca1	92	82.245	Mus_pahari
ENSSDUG00000020690	smarca5	96	81.407	MGP_SPRETEiJ_G0034192	Smarca1	93	81.966	Mus_spretus
ENSSDUG00000020690	smarca5	96	81.737	ENSMPUG00000017423	SMARCA1	88	82.294	Mustela_putorius_furo
ENSSDUG00000020690	smarca5	97	80.020	ENSMLUG00000029614	SMARCA1	93	80.723	Myotis_lucifugus
ENSSDUG00000020690	smarca5	94	82.698	ENSNGAG00000006492	Smarca1	91	82.723	Nannospalax_galili
ENSSDUG00000020690	smarca5	96	98.087	ENSNBRG00000004463	smarca5	99	98.087	Neolamprologus_brichardi
ENSSDUG00000020690	smarca5	96	80.838	ENSNLEG00000015179	SMARCA1	94	83.510	Nomascus_leucogenys
ENSSDUG00000020690	smarca5	89	75.888	ENSMEUG00000008819	SMARCA1	97	75.888	Notamacropus_eugenii
ENSSDUG00000020690	smarca5	96	80.616	ENSODEG00000012163	SMARCA1	91	82.723	Octodon_degus
ENSSDUG00000020690	smarca5	100	97.394	ENSONIG00000009993	smarca5	100	97.394	Oreochromis_niloticus
ENSSDUG00000020690	smarca5	94	84.568	ENSOANG00000002862	SMARCA1	99	84.568	Ornithorhynchus_anatinus
ENSSDUG00000020690	smarca5	95	82.877	ENSOCUG00000001047	SMARCA1	93	83.198	Oryctolagus_cuniculus
ENSSDUG00000020690	smarca5	100	96.439	ENSORLG00000021998	smarca5	100	96.439	Oryzias_latipes
ENSSDUG00000020690	smarca5	100	96.532	ENSORLG00020017679	smarca5	100	96.532	Oryzias_latipes_hni
ENSSDUG00000020690	smarca5	100	96.818	ENSORLG00015017210	smarca5	100	96.818	Oryzias_latipes_hsok
ENSSDUG00000020690	smarca5	100	96.911	ENSOMEG00000000086	smarca5	100	96.911	Oryzias_melastigma
ENSSDUG00000020690	smarca5	93	83.162	ENSOGAG00000004399	SMARCA1	91	83.560	Otolemur_garnettii
ENSSDUG00000020690	smarca5	94	83.129	ENSOARG00000014638	SMARCA1	99	83.129	Ovis_aries
ENSSDUG00000020690	smarca5	96	82.525	ENSPPAG00000034647	SMARCA1	93	83.198	Pan_paniscus
ENSSDUG00000020690	smarca5	97	82.136	ENSPPRG00000008929	SMARCA1	93	83.299	Panthera_pardus
ENSSDUG00000020690	smarca5	96	80.933	ENSPTIG00000000915	SMARCA1	96	81.481	Panthera_tigris_altaica
ENSSDUG00000020690	smarca5	96	82.525	ENSPTRG00000049876	SMARCA1	93	82.193	Pan_troglodytes
ENSSDUG00000020690	smarca5	96	82.525	ENSPANG00000003871	SMARCA1	93	83.198	Papio_anubis
ENSSDUG00000020690	smarca5	95	81.735	ENSPKIG00000013411	smarca1	96	83.701	Paramormyrops_kingsleyae
ENSSDUG00000020690	smarca5	94	84.259	ENSPSIG00000010101	SMARCA1	99	84.259	Pelodiscus_sinensis
ENSSDUG00000020690	smarca5	94	82.492	ENSPEMG00000017503	Smarca1	91	82.513	Peromyscus_maniculatus_bairdii
ENSSDUG00000020690	smarca5	94	84.221	ENSPCIG00000015460	SMARCA1	96	84.221	Phascolarctos_cinereus
ENSSDUG00000020690	smarca5	100	97.198	ENSPFOG00000007649	smarca5	100	97.198	Poecilia_formosa
ENSSDUG00000020690	smarca5	100	97.198	ENSPLAG00000003363	smarca5	100	97.198	Poecilia_latipinna
ENSSDUG00000020690	smarca5	100	97.101	ENSPMEG00000019849	smarca5	100	97.101	Poecilia_mexicana
ENSSDUG00000020690	smarca5	100	97.005	ENSPREG00000023250	smarca5	100	97.005	Poecilia_reticulata
ENSSDUG00000020690	smarca5	96	79.697	ENSPPYG00000020703	SMARCA1	93	80.346	Pongo_abelii
ENSSDUG00000020690	smarca5	75	78.125	ENSPCOG00000020722	SMARCA1	93	80.267	Propithecus_coquereli
ENSSDUG00000020690	smarca5	88	82.968	ENSPVAG00000003805	SMARCA1	84	83.049	Pteropus_vampyrus
ENSSDUG00000020690	smarca5	58	98.677	ENSPNYG00000012299	smarca5	92	98.677	Pundamilia_nyererei
ENSSDUG00000020690	smarca5	96	81.616	ENSRNOG00000003762	Smarca1	93	82.179	Rattus_norvegicus
ENSSDUG00000020690	smarca5	96	82.626	ENSRROG00000034167	SMARCA1	93	83.299	Rhinopithecus_roxellana
ENSSDUG00000020690	smarca5	99	79.347	ENSSBOG00000020641	SMARCA1	99	83.333	Saimiri_boliviensis_boliviensis
ENSSDUG00000020690	smarca5	94	79.115	ENSSHAG00000013518	SMARCA1	99	79.115	Sarcophilus_harrisii
ENSSDUG00000020690	smarca5	95	93.163	ENSSFOG00015016794	smarca5	100	93.402	Scleropages_formosus
ENSSDUG00000020690	smarca5	95	84.146	ENSSFOG00015009043	smarca1	96	84.318	Scleropages_formosus
ENSSDUG00000020690	smarca5	100	97.195	ENSSMAG00000004801	smarca5	100	97.195	Scophthalmus_maximus
ENSSDUG00000020690	smarca5	100	100.000	ENSSLDG00000025190	smarca5	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000020690	smarca5	79	84.698	ENSSARG00000000842	SMARCA1	81	84.698	Sorex_araneus
ENSSDUG00000020690	smarca5	96	82.863	ENSSPUG00000000590	SMARCA1	93	84.703	Sphenodon_punctatus
ENSSDUG00000020690	smarca5	100	97.683	ENSSPAG00000002894	smarca5	100	97.683	Stegastes_partitus
ENSSDUG00000020690	smarca5	94	83.333	ENSSSCG00000012649	SMARCA1	97	80.853	Sus_scrofa
ENSSDUG00000020690	smarca5	95	83.605	ENSTGUG00000003899	-	99	83.605	Taeniopygia_guttata
ENSSDUG00000020690	smarca5	100	95.845	ENSTRUG00000014094	smarca5	100	95.845	Takifugu_rubripes
ENSSDUG00000020690	smarca5	98	94.882	ENSTNIG00000017717	smarca5	97	95.248	Tetraodon_nigroviridis
ENSSDUG00000020690	smarca5	86	82.262	ENSTBEG00000014973	SMARCA1	89	82.300	Tupaia_belangeri
ENSSDUG00000020690	smarca5	94	79.469	ENSTTRG00000006168	SMARCA1	96	80.126	Tursiops_truncatus
ENSSDUG00000020690	smarca5	96	82.424	ENSUAMG00000020201	SMARCA1	93	82.994	Ursus_americanus
ENSSDUG00000020690	smarca5	97	77.634	ENSUMAG00000004073	SMARCA1	98	83.933	Ursus_maritimus
ENSSDUG00000020690	smarca5	74	86.513	ENSVPAG00000010492	-	77	86.851	Vicugna_pacos
ENSSDUG00000020690	smarca5	96	82.727	ENSVVUG00000008878	SMARCA1	98	84.771	Vulpes_vulpes
ENSSDUG00000020690	smarca5	95	83.418	ENSXETG00000001526	smarca1	98	83.742	Xenopus_tropicalis
ENSSDUG00000020690	smarca5	97	96.925	ENSXCOG00000011170	smarca5	100	96.925	Xiphophorus_couchianus
ENSSDUG00000020690	smarca5	100	96.812	ENSXMAG00000009678	smarca5	100	96.812	Xiphophorus_maculatus