EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000020708 (Gene tree)
Gene ID: -
Gene Symbol: elavl3
Alias: elav-related C|elavC|elrc|etID309927.3|huc|id:ibd1248|wu:fb77b03|zHuC
Full Name: ELAV like RNA binding protein 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 8467 bases
Position: chrBDQW01000044.1:2410346-2418812
Accession: 111217428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000028699	RRM_5	PF13893.6	1.7e-12	1	2
ENSSDUP00000028699	RRM_5	PF13893.6	1.7e-12	2	2
ENSSDUP00000028699	RRM_1	PF00076.22	1.4e-64	1	3
ENSSDUP00000028699	RRM_1	PF00076.22	1.4e-64	2	3
ENSSDUP00000028699	RRM_1	PF00076.22	1.4e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000029192	-	1035	XM_022739290	ENSSDUP00000028699	344 (aa)	XP_022595011	-

Gene Model

Click here to download ENSSDUG00000020708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020708's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000020708	elavl3	99	79.178	ENSSDUG00000008140	ELAVL2	94	79.178
ENSSDUG00000020708	elavl3	51	32.787	ENSSDUG00000020602	rbms1a	55	32.338
ENSSDUG00000020708	elavl3	88	35.632	ENSSDUG00000018695	celf3a	97	35.632
ENSSDUG00000020708	elavl3	99	81.148	ENSSDUG00000000045	elavl4	92	80.926
ENSSDUG00000020708	elavl3	81	42.105	ENSSDUG00000011558	celf1	54	42.553
ENSSDUG00000020708	elavl3	99	62.139	ENSSDUG00000015257	-	97	67.524
ENSSDUG00000020708	elavl3	74	41.860	ENSSDUG00000007239	celf3b	56	41.860
ENSSDUG00000020708	elavl3	90	73.163	ENSSDUG00000012465	elavl1a	90	73.163
ENSSDUG00000020708	elavl3	78	41.304	ENSSDUG00000015603	-	62	41.304
ENSSDUG00000020708	elavl3	78	42.553	ENSSDUG00000022515	-	64	42.553
ENSSDUG00000020708	elavl3	91	31.579	ENSSDUG00000011965	pabpc1b	59	30.921
ENSSDUG00000020708	elavl3	98	34.940	ENSSDUG00000022650	-	95	34.940
ENSSDUG00000020708	elavl3	68	36.667	ENSSDUG00000005666	rbms2a	53	36.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020708	elavl3	99	85.994	ENSG00000196361	ELAVL3	99	87.115	Homo_sapiens
ENSSDUG00000020708	elavl3	100	99.709	ENSAPOG00000017565	elavl3	100	99.709	Acanthochromis_polyacanthus
ENSSDUG00000020708	elavl3	99	85.994	ENSAMEG00000010487	ELAVL3	99	87.115	Ailuropoda_melanoleuca
ENSSDUG00000020708	elavl3	100	99.709	ENSACIG00000024190	elavl3	100	99.709	Amphilophus_citrinellus
ENSSDUG00000020708	elavl3	99	100.000	ENSAOCG00000005054	elavl3	99	100.000	Amphiprion_ocellaris
ENSSDUG00000020708	elavl3	99	100.000	ENSAPEG00000011145	elavl3	99	100.000	Amphiprion_percula
ENSSDUG00000020708	elavl3	99	100.000	ENSATEG00000020941	elavl3	99	100.000	Anabas_testudineus
ENSSDUG00000020708	elavl3	99	89.197	ENSACAG00000016958	ELAVL3	93	89.197	Anolis_carolinensis
ENSSDUG00000020708	elavl3	99	85.955	ENSANAG00000030798	ELAVL3	99	87.079	Aotus_nancymaae
ENSSDUG00000020708	elavl3	99	100.000	ENSACLG00000018260	elavl3	99	100.000	Astatotilapia_calliptera
ENSSDUG00000020708	elavl3	99	98.827	ENSAMXG00000040498	elavl3	99	98.827	Astyanax_mexicanus
ENSSDUG00000020708	elavl3	100	86.313	ENSBTAG00000014412	ELAVL3	100	87.430	Bos_taurus
ENSSDUG00000020708	elavl3	99	84.341	ENSCJAG00000005589	ELAVL3	99	85.440	Callithrix_jacchus
ENSSDUG00000020708	elavl3	99	84.341	ENSCAFG00000017350	ELAVL3	99	85.440	Canis_familiaris
ENSSDUG00000020708	elavl3	99	89.244	ENSCAFG00020004614	ELAVL3	97	90.407	Canis_lupus_dingo
ENSSDUG00000020708	elavl3	99	84.615	ENSCHIG00000003436	ELAVL3	100	85.714	Capra_hircus
ENSSDUG00000020708	elavl3	99	84.341	ENSTSYG00000036621	ELAVL3	99	85.440	Carlito_syrichta
ENSSDUG00000020708	elavl3	90	70.988	ENSCAPG00000017620	ELAVL3	99	72.222	Cavia_aperea
ENSSDUG00000020708	elavl3	90	70.988	ENSCPOG00000001793	ELAVL3	99	72.222	Cavia_porcellus
ENSSDUG00000020708	elavl3	99	85.754	ENSCCAG00000034350	ELAVL3	99	86.872	Cebus_capucinus
ENSSDUG00000020708	elavl3	99	84.341	ENSCATG00000044086	ELAVL3	99	85.440	Cercocebus_atys
ENSSDUG00000020708	elavl3	99	84.066	ENSCLAG00000016404	ELAVL3	100	85.165	Chinchilla_lanigera
ENSSDUG00000020708	elavl3	96	91.304	ENSCSAG00000006755	ELAVL3	100	91.304	Chlorocebus_sabaeus
ENSSDUG00000020708	elavl3	99	92.733	ENSCPBG00000023982	ELAVL3	99	89.356	Chrysemys_picta_bellii
ENSSDUG00000020708	elavl3	100	85.515	ENSCANG00000038728	ELAVL3	100	86.630	Colobus_angolensis_palliatus
ENSSDUG00000020708	elavl3	99	83.791	ENSCGRG00001018927	Elavl3	99	84.890	Cricetulus_griseus_chok1gshd
ENSSDUG00000020708	elavl3	99	83.791	ENSCGRG00000007158	Elavl3	99	84.890	Cricetulus_griseus_crigri
ENSSDUG00000020708	elavl3	99	99.120	ENSCSEG00000021095	elavl3	99	99.120	Cynoglossus_semilaevis
ENSSDUG00000020708	elavl3	100	99.419	ENSCVAG00000014060	elavl3	99	99.419	Cyprinodon_variegatus
ENSSDUG00000020708	elavl3	99	99.708	ENSDARG00000014420	elavl3	99	99.708	Danio_rerio
ENSSDUG00000020708	elavl3	99	84.314	ENSDORG00000002538	Elavl3	99	85.434	Dipodomys_ordii
ENSSDUG00000020708	elavl3	99	84.341	ENSEASG00005004561	ELAVL3	99	85.440	Equus_asinus_asinus
ENSSDUG00000020708	elavl3	98	89.971	ENSECAG00000020594	ELAVL3	100	91.150	Equus_caballus
ENSSDUG00000020708	elavl3	99	96.857	ENSELUG00000023043	elavl3	99	96.857	Esox_lucius
ENSSDUG00000020708	elavl3	99	84.341	ENSFCAG00000024763	ELAVL3	99	85.440	Felis_catus
ENSSDUG00000020708	elavl3	99	86.589	ENSFDAG00000008449	ELAVL3	99	86.589	Fukomys_damarensis
ENSSDUG00000020708	elavl3	100	99.419	ENSFHEG00000001675	elavl3	99	99.419	Fundulus_heteroclitus
ENSSDUG00000020708	elavl3	99	96.056	ENSGMOG00000003760	elavl3	99	96.056	Gadus_morhua
ENSSDUG00000020708	elavl3	51	62.295	ENSGALG00000054488	-	78	65.041	Gallus_gallus
ENSSDUG00000020708	elavl3	58	76.378	ENSGALG00000047364	-	100	76.378	Gallus_gallus
ENSSDUG00000020708	elavl3	99	96.338	ENSGAFG00000016015	elavl3	98	96.338	Gambusia_affinis
ENSSDUG00000020708	elavl3	99	97.429	ENSGACG00000013839	elavl3	99	97.429	Gasterosteus_aculeatus
ENSSDUG00000020708	elavl3	84	91.810	ENSGAGG00000016141	ELAVL3	95	91.810	Gopherus_agassizii
ENSSDUG00000020708	elavl3	99	84.341	ENSGGOG00000008635	ELAVL3	100	85.440	Gorilla_gorilla
ENSSDUG00000020708	elavl3	99	100.000	ENSHBUG00000020978	elavl3	99	100.000	Haplochromis_burtoni
ENSSDUG00000020708	elavl3	83	67.361	ENSHGLG00000019379	-	97	67.361	Heterocephalus_glaber_female
ENSSDUG00000020708	elavl3	100	84.384	ENSHGLG00000015199	ELAVL3	100	85.479	Heterocephalus_glaber_female
ENSSDUG00000020708	elavl3	94	82.659	ENSHGLG00100011200	ELAVL3	99	83.815	Heterocephalus_glaber_male
ENSSDUG00000020708	elavl3	99	97.708	ENSHCOG00000015894	elavl3	99	97.708	Hippocampus_comes
ENSSDUG00000020708	elavl3	99	99.123	ENSIPUG00000013002	elavl3	98	99.123	Ictalurus_punctatus
ENSSDUG00000020708	elavl3	99	84.341	ENSSTOG00000021111	ELAVL3	99	85.440	Ictidomys_tridecemlineatus
ENSSDUG00000020708	elavl3	99	85.165	ENSJJAG00000023513	Elavl3	100	85.165	Jaculus_jaculus
ENSSDUG00000020708	elavl3	100	99.709	ENSKMAG00000017412	elavl3	100	99.709	Kryptolebias_marmoratus
ENSSDUG00000020708	elavl3	100	99.709	ENSLBEG00000008073	elavl3	98	99.709	Labrus_bergylta
ENSSDUG00000020708	elavl3	99	93.094	ENSLOCG00000007647	elavl3	99	93.094	Lepisosteus_oculatus
ENSSDUG00000020708	elavl3	99	84.110	ENSLAFG00000005013	ELAVL3	99	85.205	Loxodonta_africana
ENSSDUG00000020708	elavl3	99	85.754	ENSMFAG00000003692	ELAVL3	99	86.872	Macaca_fascicularis
ENSSDUG00000020708	elavl3	99	85.754	ENSMMUG00000020616	ELAVL3	100	86.872	Macaca_mulatta
ENSSDUG00000020708	elavl3	100	85.794	ENSMNEG00000043973	ELAVL3	100	86.908	Macaca_nemestrina
ENSSDUG00000020708	elavl3	98	83.265	ENSMLEG00000013976	ELAVL3	100	83.265	Mandrillus_leucophaeus
ENSSDUG00000020708	elavl3	99	99.415	ENSMAMG00000011697	elavl3	99	99.415	Mastacembelus_armatus
ENSSDUG00000020708	elavl3	99	100.000	ENSMZEG00005019053	elavl3	99	100.000	Maylandia_zebra
ENSSDUG00000020708	elavl3	99	83.791	ENSMAUG00000016478	Elavl3	100	84.890	Mesocricetus_auratus
ENSSDUG00000020708	elavl3	99	84.341	ENSMICG00000016528	ELAVL3	100	85.440	Microcebus_murinus
ENSSDUG00000020708	elavl3	99	83.791	ENSMOCG00000002046	Elavl3	99	84.890	Microtus_ochrogaster
ENSSDUG00000020708	elavl3	99	100.000	ENSMMOG00000012154	elavl3	99	100.000	Mola_mola
ENSSDUG00000020708	elavl3	99	87.675	ENSMODG00000006653	ELAVL3	92	87.675	Monodelphis_domestica
ENSSDUG00000020708	elavl3	100	96.359	ENSMALG00000016659	elavl3	100	96.359	Monopterus_albus
ENSSDUG00000020708	elavl3	98	86.080	MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	Mus_caroli
ENSSDUG00000020708	elavl3	99	83.791	ENSMUSG00000003410	Elavl3	99	84.890	Mus_musculus
ENSSDUG00000020708	elavl3	98	85.795	MGP_PahariEiJ_G0014760	Elavl3	100	86.932	Mus_pahari
ENSSDUG00000020708	elavl3	99	84.066	ENSMPUG00000005040	ELAVL3	99	85.165	Mustela_putorius_furo
ENSSDUG00000020708	elavl3	99	85.479	ENSMLUG00000016320	ELAVL3	99	85.479	Myotis_lucifugus
ENSSDUG00000020708	elavl3	100	84.110	ENSNGAG00000000968	Elavl3	99	85.440	Nannospalax_galili
ENSSDUG00000020708	elavl3	99	96.348	ENSNBRG00000010319	elavl3	99	96.348	Neolamprologus_brichardi
ENSSDUG00000020708	elavl3	99	88.187	ENSMEUG00000016706	ELAVL3	100	88.187	Notamacropus_eugenii
ENSSDUG00000020708	elavl3	85	89.407	ENSOPRG00000007373	ELAVL3	96	89.407	Ochotona_princeps
ENSSDUG00000020708	elavl3	100	84.110	ENSODEG00000015790	ELAVL3	100	85.205	Octodon_degus
ENSSDUG00000020708	elavl3	99	96.348	ENSONIG00000001538	elavl3	99	96.348	Oreochromis_niloticus
ENSSDUG00000020708	elavl3	83	86.905	ENSOANG00000015046	ELAVL3	98	86.905	Ornithorhynchus_anatinus
ENSSDUG00000020708	elavl3	100	95.798	ENSORLG00000005379	elavl3	99	95.798	Oryzias_latipes
ENSSDUG00000020708	elavl3	100	99.419	ENSORLG00020004570	elavl3	99	100.000	Oryzias_latipes_hni
ENSSDUG00000020708	elavl3	99	96.307	ENSORLG00015000662	elavl3	98	96.307	Oryzias_latipes_hsok
ENSSDUG00000020708	elavl3	100	99.419	ENSOMEG00000023959	elavl3	99	99.419	Oryzias_melastigma
ENSSDUG00000020708	elavl3	99	84.341	ENSOGAG00000007072	ELAVL3	99	85.440	Otolemur_garnettii
ENSSDUG00000020708	elavl3	99	84.615	ENSOARG00000018464	ELAVL3	99	85.714	Ovis_aries
ENSSDUG00000020708	elavl3	99	84.341	ENSPPAG00000033972	ELAVL3	99	85.440	Pan_paniscus
ENSSDUG00000020708	elavl3	99	84.341	ENSPPRG00000005151	ELAVL3	99	85.440	Panthera_pardus
ENSSDUG00000020708	elavl3	98	84.366	ENSPTIG00000013610	ELAVL3	97	85.546	Panthera_tigris_altaica
ENSSDUG00000020708	elavl3	99	84.341	ENSPTRG00000010506	ELAVL3	99	85.440	Pan_troglodytes
ENSSDUG00000020708	elavl3	99	85.754	ENSPANG00000005849	ELAVL3	99	86.872	Papio_anubis
ENSSDUG00000020708	elavl3	99	99.123	ENSPKIG00000016207	elavl3	99	99.123	Paramormyrops_kingsleyae
ENSSDUG00000020708	elavl3	99	100.000	ENSPMGG00000002016	elavl3	99	100.000	Periophthalmus_magnuspinnatus
ENSSDUG00000020708	elavl3	98	91.599	ENSPFOG00000007754	elavl3	100	91.599	Poecilia_formosa
ENSSDUG00000020708	elavl3	99	100.000	ENSPLAG00000001547	elavl3	99	100.000	Poecilia_latipinna
ENSSDUG00000020708	elavl3	99	100.000	ENSPMEG00000010156	elavl3	99	100.000	Poecilia_mexicana
ENSSDUG00000020708	elavl3	100	99.419	ENSPREG00000006971	elavl3	99	99.419	Poecilia_reticulata
ENSSDUG00000020708	elavl3	84	80.224	ENSPPYG00000009583	-	98	81.343	Pongo_abelii
ENSSDUG00000020708	elavl3	83	88.182	ENSPCAG00000015952	ELAVL3	59	90.909	Procavia_capensis
ENSSDUG00000020708	elavl3	99	84.341	ENSPCOG00000023781	ELAVL3	99	85.440	Propithecus_coquereli
ENSSDUG00000020708	elavl3	99	84.341	ENSPVAG00000014893	ELAVL3	99	85.440	Pteropus_vampyrus
ENSSDUG00000020708	elavl3	99	100.000	ENSPNYG00000013186	elavl3	97	100.000	Pundamilia_nyererei
ENSSDUG00000020708	elavl3	99	99.415	ENSPNAG00000003633	elavl3	99	99.415	Pygocentrus_nattereri
ENSSDUG00000020708	elavl3	99	83.791	ENSRNOG00000013752	Elavl3	99	84.890	Rattus_norvegicus
ENSSDUG00000020708	elavl3	98	86.402	ENSRBIG00000034762	ELAVL3	99	87.535	Rhinopithecus_bieti
ENSSDUG00000020708	elavl3	90	86.000	ENSRROG00000034305	ELAVL3	95	90.909	Rhinopithecus_roxellana
ENSSDUG00000020708	elavl3	99	84.341	ENSSBOG00000030047	ELAVL3	100	89.103	Saimiri_boliviensis_boliviensis
ENSSDUG00000020708	elavl3	96	93.478	ENSSHAG00000005583	ELAVL3	100	93.478	Sarcophilus_harrisii
ENSSDUG00000020708	elavl3	94	99.068	ENSSFOG00015023630	elavl3	99	99.068	Scleropages_formosus
ENSSDUG00000020708	elavl3	99	99.123	ENSSMAG00000004671	elavl3	99	99.123	Scophthalmus_maximus
ENSSDUG00000020708	elavl3	100	100.000	ENSSLDG00000013769	elavl3	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000020708	elavl3	99	74.521	ENSSARG00000005949	ELAVL3	100	75.616	Sorex_araneus
ENSSDUG00000020708	elavl3	100	99.709	ENSSPAG00000000990	elavl3	100	99.709	Stegastes_partitus
ENSSDUG00000020708	elavl3	99	84.341	ENSSSCG00000013617	ELAVL3	99	85.440	Sus_scrofa
ENSSDUG00000020708	elavl3	99	100.000	ENSTRUG00000010719	elavl3	99	100.000	Takifugu_rubripes
ENSSDUG00000020708	elavl3	99	95.543	ENSTNIG00000018572	elavl3	99	95.543	Tetraodon_nigroviridis
ENSSDUG00000020708	elavl3	97	81.651	ENSTBEG00000006133	ELAVL3	100	82.875	Tupaia_belangeri
ENSSDUG00000020708	elavl3	99	84.066	ENSTTRG00000001789	ELAVL3	99	85.165	Tursiops_truncatus
ENSSDUG00000020708	elavl3	100	87.500	ENSUAMG00000000405	ELAVL3	99	88.636	Ursus_americanus
ENSSDUG00000020708	elavl3	98	82.667	ENSUMAG00000019546	ELAVL3	87	84.000	Ursus_maritimus
ENSSDUG00000020708	elavl3	99	85.994	ENSVVUG00000023733	ELAVL3	99	87.115	Vulpes_vulpes
ENSSDUG00000020708	elavl3	99	92.174	ENSXETG00000016741	elavl3	99	92.174	Xenopus_tropicalis
ENSSDUG00000020708	elavl3	100	99.419	ENSXMAG00000018287	elavl3	99	99.419	Xiphophorus_maculatus