EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000020774 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3324 bases
Position: chrBDQW01000917.1:295400-298723
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000028798	zf-C2H2	PF00096.26	4.5e-12	1	2
ENSSDUP00000028798	zf-C2H2	PF00096.26	4.5e-12	2	2
ENSSDUP00000028798	zf-met	PF12874.7	4.1e-08	1	2
ENSSDUP00000028798	zf-met	PF12874.7	4.1e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000029291	-	804	-	ENSSDUP00000028798	267 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000020774's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020774's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000020774	-	64	50.962	ENSSDUG00000000799	-	68	47.423
ENSSDUG00000020774	-	74	40.336	ENSSDUG00000015622	-	94	32.189
ENSSDUG00000020774	-	91	44.554	ENSSDUG00000009553	-	91	44.554
ENSSDUG00000020774	-	50	42.157	ENSSDUG00000020397	prdm5	86	42.157
ENSSDUG00000020774	-	86	63.878	ENSSDUG00000020783	-	74	63.878
ENSSDUG00000020774	-	91	48.837	ENSSDUG00000009425	-	88	48.837
ENSSDUG00000020774	-	70	46.535	ENSSDUG00000009421	-	100	46.535
ENSSDUG00000020774	-	76	45.098	ENSSDUG00000002174	-	80	46.078
ENSSDUG00000020774	-	50	53.571	ENSSDUG00000000889	-	74	53.571
ENSSDUG00000020774	-	83	47.525	ENSSDUG00000009534	-	86	47.059
ENSSDUG00000020774	-	51	45.098	ENSSDUG00000004089	-	95	43.333
ENSSDUG00000020774	-	76	46.591	ENSSDUG00000006426	-	99	46.591
ENSSDUG00000020774	-	91	42.373	ENSSDUG00000000786	-	92	47.619
ENSSDUG00000020774	-	72	49.462	ENSSDUG00000013904	-	66	49.462
ENSSDUG00000020774	-	86	48.485	ENSSDUG00000006740	-	76	48.485
ENSSDUG00000020774	-	84	50.526	ENSSDUG00000000946	-	95	58.696
ENSSDUG00000020774	-	84	53.191	ENSSDUG00000005401	-	99	47.959
ENSSDUG00000020774	-	78	46.535	ENSSDUG00000009601	-	99	46.535
ENSSDUG00000020774	-	76	48.571	ENSSDUG00000008682	-	98	48.571
ENSSDUG00000020774	-	92	50.495	ENSSDUG00000015182	-	92	50.000
ENSSDUG00000020774	-	81	42.553	ENSSDUG00000022035	-	81	42.553
ENSSDUG00000020774	-	90	54.000	ENSSDUG00000019911	-	83	54.000
ENSSDUG00000020774	-	81	45.631	ENSSDUG00000009563	-	97	45.631
ENSSDUG00000020774	-	82	70.796	ENSSDUG00000020788	-	96	70.796
ENSSDUG00000020774	-	82	62.452	ENSSDUG00000020810	-	97	62.452
ENSSDUG00000020774	-	75	45.205	ENSSDUG00000015254	-	89	49.180
ENSSDUG00000020774	-	54	51.064	ENSSDUG00000015204	-	96	51.064
ENSSDUG00000020774	-	82	42.466	ENSSDUG00000000686	-	64	42.466
ENSSDUG00000020774	-	51	47.525	ENSSDUG00000005323	-	91	47.525
ENSSDUG00000020774	-	53	50.000	ENSSDUG00000011244	-	82	50.000
ENSSDUG00000020774	-	76	45.556	ENSSDUG00000009439	-	96	45.556
ENSSDUG00000020774	-	79	48.739	ENSSDUG00000015191	-	99	48.739
ENSSDUG00000020774	-	50	45.238	ENSSDUG00000019932	ZNF319	84	45.238
ENSSDUG00000020774	-	61	39.167	ENSSDUG00000016450	-	52	39.362
ENSSDUG00000020774	-	60	46.154	ENSSDUG00000016734	-	51	46.154
ENSSDUG00000020774	-	83	50.000	ENSSDUG00000007336	-	98	50.000
ENSSDUG00000020774	-	83	45.631	ENSSDUG00000008329	-	82	45.631
ENSSDUG00000020774	-	92	47.619	ENSSDUG00000009577	-	91	47.619
ENSSDUG00000020774	-	84	51.485	ENSSDUG00000000838	-	82	51.485
ENSSDUG00000020774	-	50	40.000	ENSSDUG00000018060	snai2	66	40.000
ENSSDUG00000020774	-	76	46.667	ENSSDUG00000008943	-	100	46.667
ENSSDUG00000020774	-	63	47.619	ENSSDUG00000015159	-	92	47.619
ENSSDUG00000020774	-	54	46.512	ENSSDUG00000012926	-	93	46.512
ENSSDUG00000020774	-	82	46.809	ENSSDUG00000000695	-	64	46.809

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020774	-	69	36.979	ENSAPOG00000018429	-	74	34.513	Acanthochromis_polyacanthus
ENSSDUG00000020774	-	76	52.212	ENSAPOG00000019138	-	69	52.212	Acanthochromis_polyacanthus
ENSSDUG00000020774	-	65	40.331	ENSACIG00000004641	-	56	40.331	Amphilophus_citrinellus
ENSSDUG00000020774	-	65	40.217	ENSACIG00000006826	-	74	40.217	Amphilophus_citrinellus
ENSSDUG00000020774	-	87	40.000	ENSACIG00000007464	-	82	40.000	Amphilophus_citrinellus
ENSSDUG00000020774	-	77	45.977	ENSAOCG00000016897	-	84	45.977	Amphiprion_ocellaris
ENSSDUG00000020774	-	88	52.941	ENSAPEG00000018762	-	74	52.941	Amphiprion_percula
ENSSDUG00000020774	-	77	51.327	ENSAPEG00000001556	-	84	51.327	Amphiprion_percula
ENSSDUG00000020774	-	78	45.918	ENSATEG00000018931	-	96	43.363	Anabas_testudineus
ENSSDUG00000020774	-	83	56.701	ENSCSEG00000008525	-	88	56.701	Cynoglossus_semilaevis
ENSSDUG00000020774	-	83	52.326	ENSCSEG00000008528	-	72	52.326	Cynoglossus_semilaevis
ENSSDUG00000020774	-	76	50.980	ENSCSEG00000010453	-	86	50.980	Cynoglossus_semilaevis
ENSSDUG00000020774	-	53	34.752	ENSCVAG00000020141	-	89	35.374	Cyprinodon_variegatus
ENSSDUG00000020774	-	52	41.007	ENSCVAG00000012682	-	76	41.007	Cyprinodon_variegatus
ENSSDUG00000020774	-	69	44.715	ENSCVAG00000003250	-	68	44.715	Cyprinodon_variegatus
ENSSDUG00000020774	-	85	46.939	ENSCVAG00000006484	-	78	46.939	Cyprinodon_variegatus
ENSSDUG00000020774	-	78	47.191	ENSELUG00000012088	-	78	47.191	Esox_lucius
ENSSDUG00000020774	-	83	45.545	ENSELUG00000020882	-	78	45.545	Esox_lucius
ENSSDUG00000020774	-	82	46.296	ENSFHEG00000023184	-	95	46.296	Fundulus_heteroclitus
ENSSDUG00000020774	-	79	40.404	ENSGAFG00000012545	-	80	41.489	Gambusia_affinis
ENSSDUG00000020774	-	78	40.000	ENSGAFG00000001879	-	94	40.000	Gambusia_affinis
ENSSDUG00000020774	-	81	47.059	ENSGAFG00000008204	-	86	47.059	Gambusia_affinis
ENSSDUG00000020774	-	81	45.370	ENSGAFG00000011998	-	69	45.370	Gambusia_affinis
ENSSDUG00000020774	-	81	52.475	ENSHCOG00000001873	-	87	50.943	Hippocampus_comes
ENSSDUG00000020774	-	91	39.773	ENSHCOG00000008227	-	81	39.773	Hippocampus_comes
ENSSDUG00000020774	-	85	49.515	ENSHCOG00000013489	-	98	54.286	Hippocampus_comes
ENSSDUG00000020774	-	82	50.000	ENSHCOG00000015497	-	85	50.000	Hippocampus_comes
ENSSDUG00000020774	-	81	52.475	ENSHCOG00000008550	-	87	50.943	Hippocampus_comes
ENSSDUG00000020774	-	76	45.055	ENSHCOG00000008213	-	80	45.055	Hippocampus_comes
ENSSDUG00000020774	-	79	46.610	ENSHCOG00000019389	-	79	46.610	Hippocampus_comes
ENSSDUG00000020774	-	62	36.842	ENSKMAG00000014184	-	61	36.842	Kryptolebias_marmoratus
ENSSDUG00000020774	-	73	58.824	ENSLBEG00000011210	-	70	58.824	Labrus_bergylta
ENSSDUG00000020774	-	74	49.091	ENSLBEG00000006161	-	90	49.091	Labrus_bergylta
ENSSDUG00000020774	-	59	45.714	ENSLBEG00000007106	-	80	44.545	Labrus_bergylta
ENSSDUG00000020774	-	75	43.966	ENSMAMG00000017939	-	71	43.966	Mastacembelus_armatus
ENSSDUG00000020774	-	82	44.622	ENSMMOG00000017592	-	69	45.020	Mola_mola
ENSSDUG00000020774	-	53	43.564	ENSMALG00000004279	-	84	43.564	Monopterus_albus
ENSSDUG00000020774	-	74	42.079	ENSNBRG00000006112	-	61	42.079	Neolamprologus_brichardi
ENSSDUG00000020774	-	54	39.496	ENSONIG00000007967	-	55	39.496	Oreochromis_niloticus
ENSSDUG00000020774	-	51	46.364	ENSORLG00000002268	-	82	46.364	Oryzias_latipes
ENSSDUG00000020774	-	78	40.594	ENSORLG00020018921	-	94	40.594	Oryzias_latipes_hni
ENSSDUG00000020774	-	75	35.021	ENSORLG00020019227	-	76	35.021	Oryzias_latipes_hni
ENSSDUG00000020774	-	55	49.524	ENSPMGG00000009571	-	89	49.524	Periophthalmus_magnuspinnatus
ENSSDUG00000020774	-	79	48.101	ENSPMGG00000002661	-	93	48.101	Periophthalmus_magnuspinnatus
ENSSDUG00000020774	-	83	40.000	ENSPFOG00000009491	-	81	40.000	Poecilia_formosa
ENSSDUG00000020774	-	79	44.565	ENSPLAG00000010067	-	95	44.565	Poecilia_latipinna
ENSSDUG00000020774	-	83	40.000	ENSPMEG00000024117	-	81	40.000	Poecilia_mexicana
ENSSDUG00000020774	-	59	39.665	ENSSMAG00000004259	-	88	39.665	Scophthalmus_maximus
ENSSDUG00000020774	-	78	37.402	ENSSPAG00000005770	-	76	37.402	Stegastes_partitus
ENSSDUG00000020774	-	57	50.000	ENSXETG00000012506	znf91	99	50.000	Xenopus_tropicalis
ENSSDUG00000020774	-	75	44.545	ENSXCOG00000014360	-	95	43.636	Xiphophorus_couchianus
ENSSDUG00000020774	-	85	45.669	ENSXCOG00000003441	-	91	44.086	Xiphophorus_couchianus