EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000020847 (Gene tree)
Gene ID: 111220055
Gene Symbol: -
Alias: -
Full Name: myosin light chain kinase%2C smooth muscle-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 10950 bases
Position: chrBDQW01000068.1:8675913-8686862
Accession: 111220055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000028927	RIO1	PF01163.22	3e-06	1	1
ENSSDUP00000028905	RIO1	PF01163.22	3.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000029398	-	5321	-	ENSSDUP00000028905	851 (aa)	-	-
ENSSDUT00000029417	-	5303	XM_022743001	ENSSDUP00000028927	845 (aa)	XP_022598722	UPI000BBE36BA

Gene Model

Click here to download ENSSDUG00000020847's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu04020	Calcium signaling pathway	KEGG
sdu04270	Vascular smooth muscle contraction	KEGG
sdu04371	Apelin signaling pathway	KEGG
sdu04510	Focal adhesion	KEGG
sdu04810	Regulation of actin cytoskeleton	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020847	-	92	55.055	ENSAPOG00000023231	mylk5	94	55.177	Acanthochromis_polyacanthus
ENSSDUG00000020847	-	99	78.150	ENSAPOG00000019520	-	99	78.035	Acanthochromis_polyacanthus
ENSSDUG00000020847	-	99	71.277	ENSACIG00000024477	-	99	71.277	Amphilophus_citrinellus
ENSSDUG00000020847	-	99	52.822	ENSAOCG00000014130	mylk5	97	56.739	Amphiprion_ocellaris
ENSSDUG00000020847	-	99	78.150	ENSAOCG00000024465	-	99	78.150	Amphiprion_ocellaris
ENSSDUG00000020847	-	99	52.822	ENSAPEG00000017851	mylk5	97	56.795	Amphiprion_percula
ENSSDUG00000020847	-	99	76.303	ENSAPEG00000014652	-	99	76.303	Amphiprion_percula
ENSSDUG00000020847	-	92	56.098	ENSATEG00000002426	mylk5	93	56.098	Anabas_testudineus
ENSSDUG00000020847	-	99	71.953	ENSACLG00000007583	-	99	71.953	Astatotilapia_calliptera
ENSSDUG00000020847	-	92	55.612	ENSACLG00000003301	mylk5	99	54.988	Astatotilapia_calliptera
ENSSDUG00000020847	-	81	61.248	ENSAMXG00000019493	-	94	60.610	Astyanax_mexicanus
ENSSDUG00000020847	-	82	54.885	ENSCSEG00000017281	mylk5	94	55.362	Cynoglossus_semilaevis
ENSSDUG00000020847	-	99	70.127	ENSCVAG00000022136	-	99	70.127	Cyprinodon_variegatus
ENSSDUG00000020847	-	96	53.846	ENSCVAG00000022813	mylk5	99	53.846	Cyprinodon_variegatus
ENSSDUG00000020847	-	99	52.669	ENSFHEG00000011638	-	99	52.669	Fundulus_heteroclitus
ENSSDUG00000020847	-	99	68.548	ENSFHEG00000010974	-	99	68.548	Fundulus_heteroclitus
ENSSDUG00000020847	-	99	52.055	ENSGAFG00000000269	mylk5	99	52.055	Gambusia_affinis
ENSSDUG00000020847	-	77	56.672	ENSGACG00000008527	mylk5	99	56.672	Gasterosteus_aculeatus
ENSSDUG00000020847	-	99	69.059	ENSHBUG00000016459	-	99	69.059	Haplochromis_burtoni
ENSSDUG00000020847	-	92	55.472	ENSHBUG00000002257	mylk5	94	55.472	Haplochromis_burtoni
ENSSDUG00000020847	-	100	61.302	ENSHCOG00000015710	-	100	61.302	Hippocampus_comes
ENSSDUG00000020847	-	92	54.814	ENSIPUG00000012659	mylk5	96	54.814	Ictalurus_punctatus
ENSSDUG00000020847	-	99	53.396	ENSKMAG00000019605	mylk5	99	53.396	Kryptolebias_marmoratus
ENSSDUG00000020847	-	99	70.242	ENSKMAG00000016742	-	99	70.242	Kryptolebias_marmoratus
ENSSDUG00000020847	-	99	54.009	ENSLBEG00000003526	mylk5	99	54.009	Labrus_bergylta
ENSSDUG00000020847	-	99	74.912	ENSLBEG00000004115	-	99	74.912	Labrus_bergylta
ENSSDUG00000020847	-	99	51.981	ENSMAMG00000000610	mylk5	99	51.981	Mastacembelus_armatus
ENSSDUG00000020847	-	92	55.709	ENSMZEG00005022663	mylk5	95	55.709	Maylandia_zebra
ENSSDUG00000020847	-	92	54.465	ENSMMOG00000020584	mylk5	96	54.465	Mola_mola
ENSSDUG00000020847	-	92	54.668	ENSMALG00000004945	mylk5	94	54.668	Monopterus_albus
ENSSDUG00000020847	-	99	76.815	ENSMALG00000022416	-	95	76.815	Monopterus_albus
ENSSDUG00000020847	-	99	71.578	ENSONIG00000016230	-	99	71.578	Oreochromis_niloticus
ENSSDUG00000020847	-	92	55.377	ENSONIG00000001203	mylk5	98	65.639	Oreochromis_niloticus
ENSSDUG00000020847	-	53	65.639	ENSONIG00000019875	-	98	65.639	Oreochromis_niloticus
ENSSDUG00000020847	-	99	51.665	ENSPFOG00000013597	mylk5	99	51.665	Poecilia_formosa
ENSSDUG00000020847	-	99	52.169	ENSPLAG00000023779	mylk5	99	52.169	Poecilia_latipinna
ENSSDUG00000020847	-	99	52.431	ENSPMEG00000023897	mylk5	100	51.839	Poecilia_mexicana
ENSSDUG00000020847	-	75	60.508	ENSPREG00000009707	mylk5	88	60.508	Poecilia_reticulata
ENSSDUG00000020847	-	99	68.129	ENSPREG00000003222	-	99	68.129	Poecilia_reticulata
ENSSDUG00000020847	-	99	69.395	ENSPNYG00000019509	-	99	69.395	Pundamilia_nyererei
ENSSDUG00000020847	-	92	54.090	ENSPNYG00000010046	mylk5	95	54.136	Pundamilia_nyererei
ENSSDUG00000020847	-	78	63.843	ENSSFOG00015004885	-	92	63.843	Scleropages_formosus
ENSSDUG00000020847	-	99	81.398	ENSSMAG00000020328	-	99	81.398	Scophthalmus_maximus
ENSSDUG00000020847	-	92	54.590	ENSSMAG00000006784	mylk5	94	54.590	Scophthalmus_maximus
ENSSDUG00000020847	-	100	97.751	ENSSLDG00000019897	-	99	97.751	Seriola_lalandi_dorsalis
ENSSDUG00000020847	-	96	55.542	ENSSPAG00000020815	mylk5	99	55.542	Stegastes_partitus
ENSSDUG00000020847	-	99	78.152	ENSSPAG00000019068	-	99	78.152	Stegastes_partitus
ENSSDUG00000020847	-	99	50.342	ENSTRUG00000015150	mylk5	99	50.859	Takifugu_rubripes
ENSSDUG00000020847	-	59	79.669	ENSTNIG00000004928	-	100	79.669	Tetraodon_nigroviridis
ENSSDUG00000020847	-	70	56.814	ENSTNIG00000011699	mylk5	99	57.380	Tetraodon_nigroviridis
ENSSDUG00000020847	-	93	68.066	ENSXCOG00000005927	-	85	82.022	Xiphophorus_couchianus
ENSSDUG00000020847	-	99	51.712	ENSXMAG00000007789	mylk5	99	51.712	Xiphophorus_maculatus
ENSSDUG00000020847	-	86	68.758	ENSXMAG00000015589	-	94	68.758	Xiphophorus_maculatus