EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000020881 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 7567 bases
Position: chrBDQW01000319.1:2770849-2778415
Accession: 111231811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000028953	TUDOR	PF00567.24	6.9e-09	1	1
ENSSDUP00000028953	SMN	PF06003.12	1.9e-36	1	2
ENSSDUP00000028953	SMN	PF06003.12	1.9e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000029446	-	2721	XM_022759047	ENSSDUP00000028953	353 (aa)	XP_022614768	-

Gene Model

Click here to download ENSSDUG00000020881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020881's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020881	-	100	61.957	ENSAOCG00000006124	-	100	63.315	Amphiprion_ocellaris
ENSSDUG00000020881	-	63	66.087	ENSAPEG00000000852	-	65	66.087	Amphiprion_percula
ENSSDUG00000020881	-	100	62.162	ENSATEG00000005614	-	100	60.541	Anabas_testudineus
ENSSDUG00000020881	-	99	56.098	ENSACLG00000002833	-	100	55.616	Astatotilapia_calliptera
ENSSDUG00000020881	-	99	61.983	ENSMAMG00000016192	-	100	60.167	Mastacembelus_armatus
ENSSDUG00000020881	-	99	55.827	ENSMZEG00005003112	-	96	56.851	Maylandia_zebra
ENSSDUG00000020881	-	100	51.226	ENSMALG00000020522	-	100	50.954	Monopterus_albus
ENSSDUG00000020881	-	71	49.302	ENSPFOG00000022021	-	89	48.837	Poecilia_formosa
ENSSDUG00000020881	-	91	34.808	ENSSFOG00015022042	-	86	34.884	Scleropages_formosus
ENSSDUG00000020881	-	98	96.542	ENSSLDG00000013900	-	95	96.542	Seriola_lalandi_dorsalis