EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000020926 (Gene tree)
Gene ID: 111234351
Gene Symbol: sar1b
Alias: sara2|zgc:73204
Full Name: secretion associated Ras related GTPase 1B
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 8150 bases
Position: chrBDQW01000449.1:2667719-2675868
Accession: 111234351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000029033	MMR_HSR1	PF01926.23	4.9e-05	1	1
ENSSDUP00000029020	MMR_HSR1	PF01926.23	5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000029526	-	375	-	ENSSDUP00000029033	124 (aa)	-	-
ENSSDUT00000029513	-	4454	XM_022762386	ENSSDUP00000029020	198 (aa)	XP_022618107	UPI000BBE33FC

Gene Model

Click here to download ENSSDUG00000020926's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020926's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000020926	sar1b	80	34.343	ENSSDUG00000014675	-	73	32.331
ENSSDUG00000020926	sar1b	79	36.275	ENSSDUG00000017254	-	57	36.275
ENSSDUG00000020926	sar1b	72	35.955	ENSSDUG00000007515	ARL5B	50	35.955
ENSSDUG00000020926	sar1b	89	31.667	ENSSDUG00000013427	-	92	31.667
ENSSDUG00000020926	sar1b	79	35.354	ENSSDUG00000013898	arl1	56	35.354
ENSSDUG00000020926	sar1b	84	34.615	ENSSDUG00000007524	arf3b	56	34.615
ENSSDUG00000020926	sar1b	71	37.634	ENSSDUG00000000586	arl4aa	72	31.757
ENSSDUG00000020926	sar1b	80	35.644	ENSSDUG00000023723	-	93	34.615
ENSSDUG00000020926	sar1b	85	32.479	ENSSDUG00000006652	ARL6	82	31.410
ENSSDUG00000020926	sar1b	75	36.559	ENSSDUG00000005105	arf5	52	36.559
ENSSDUG00000020926	sar1b	98	87.705	ENSSDUG00000019629	-	100	84.848
ENSSDUG00000020926	sar1b	85	36.937	ENSSDUG00000012868	arl4cb	76	31.333
ENSSDUG00000020926	sar1b	93	30.270	ENSSDUG00000003943	arl3l2	93	30.270
ENSSDUG00000020926	sar1b	71	37.234	ENSSDUG00000011151	-	73	31.788
ENSSDUG00000020926	sar1b	100	84.848	ENSSDUG00000010773	sar1ab	100	84.848
ENSSDUG00000020926	sar1b	88	31.111	ENSSDUG00000010935	arl4d	84	31.111
ENSSDUG00000020926	sar1b	86	32.584	ENSSDUG00000017586	-	82	32.584
ENSSDUG00000020926	sar1b	74	34.783	ENSSDUG00000022640	arl5c	51	35.955
ENSSDUG00000020926	sar1b	79	38.384	ENSSDUG00000017356	-	55	38.384
ENSSDUG00000020926	sar1b	84	34.615	ENSSDUG00000013041	-	57	34.615
ENSSDUG00000020926	sar1b	80	33.333	ENSSDUG00000021397	arl2	59	32.407
ENSSDUG00000020926	sar1b	75	31.915	ENSSDUG00000004422	arl11	55	31.915
ENSSDUG00000020926	sar1b	93	33.043	ENSSDUG00000020599	-	60	33.043
ENSSDUG00000020926	sar1b	76	30.464	ENSSDUG00000021055	arl8ba	64	30.464
ENSSDUG00000020926	sar1b	82	34.951	ENSSDUG00000007780	arf2b	57	34.951

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020926	sar1b	94	91.379	ENSAPOG00000017891	-	100	85.354	Acanthochromis_polyacanthus
ENSSDUG00000020926	sar1b	100	94.949	ENSAPOG00000007186	sar1b	100	94.949	Acanthochromis_polyacanthus
ENSSDUG00000020926	sar1b	100	83.838	ENSACIG00000024513	-	100	83.838	Amphilophus_citrinellus
ENSSDUG00000020926	sar1b	100	95.455	ENSACIG00000013634	sar1b	100	95.455	Amphilophus_citrinellus
ENSSDUG00000020926	sar1b	94	91.379	ENSAOCG00000002627	-	100	85.354	Amphiprion_ocellaris
ENSSDUG00000020926	sar1b	100	95.455	ENSAOCG00000005888	sar1b	100	95.455	Amphiprion_ocellaris
ENSSDUG00000020926	sar1b	100	95.455	ENSAPEG00000022771	sar1b	100	95.455	Amphiprion_percula
ENSSDUG00000020926	sar1b	99	87.805	ENSAPEG00000019680	-	100	85.354	Amphiprion_percula
ENSSDUG00000020926	sar1b	100	94.949	ENSATEG00000012904	sar1b	100	94.949	Anabas_testudineus
ENSSDUG00000020926	sar1b	94	90.517	ENSATEG00000023368	-	100	83.838	Anabas_testudineus
ENSSDUG00000020926	sar1b	100	90.909	ENSACAG00000001470	-	100	90.909	Anolis_carolinensis
ENSSDUG00000020926	sar1b	100	84.848	ENSACLG00000005011	-	100	84.848	Astatotilapia_calliptera
ENSSDUG00000020926	sar1b	100	94.444	ENSACLG00000014649	sar1b	100	94.444	Astatotilapia_calliptera
ENSSDUG00000020926	sar1b	94	93.966	ENSAMXG00000018108	sar1b	84	93.162	Astyanax_mexicanus
ENSSDUG00000020926	sar1b	100	85.859	ENSAMXG00000034192	-	91	85.859	Astyanax_mexicanus
ENSSDUG00000020926	sar1b	100	84.343	ENSCSEG00000016976	-	100	84.343	Cynoglossus_semilaevis
ENSSDUG00000020926	sar1b	100	89.899	ENSCSEG00000015238	sar1b	97	89.899	Cynoglossus_semilaevis
ENSSDUG00000020926	sar1b	100	94.444	ENSCVAG00000022959	sar1b	100	94.444	Cyprinodon_variegatus
ENSSDUG00000020926	sar1b	100	93.939	ENSDARG00000103403	sar1b	100	93.939	Danio_rerio
ENSSDUG00000020926	sar1b	99	69.898	FBgn0038947	Sar1	99	69.898	Drosophila_melanogaster
ENSSDUG00000020926	sar1b	97	89.583	ENSEBUG00000011723	sar1b	97	89.583	Eptatretus_burgeri
ENSSDUG00000020926	sar1b	100	94.949	ENSELUG00000020912	sar1b	100	94.949	Esox_lucius
ENSSDUG00000020926	sar1b	100	94.949	ENSFHEG00000019865	sar1b	100	94.949	Fundulus_heteroclitus
ENSSDUG00000020926	sar1b	100	94.444	ENSGMOG00000008023	sar1b	100	94.444	Gadus_morhua
ENSSDUG00000020926	sar1b	100	93.939	ENSGAFG00000007081	sar1b	100	93.939	Gambusia_affinis
ENSSDUG00000020926	sar1b	100	92.424	ENSGACG00000001474	sar1b	100	92.424	Gasterosteus_aculeatus
ENSSDUG00000020926	sar1b	100	94.444	ENSHBUG00000000915	sar1b	100	94.444	Haplochromis_burtoni
ENSSDUG00000020926	sar1b	100	84.848	ENSHBUG00000018397	-	100	84.848	Haplochromis_burtoni
ENSSDUG00000020926	sar1b	100	94.444	ENSHCOG00000010953	sar1b	100	94.444	Hippocampus_comes
ENSSDUG00000020926	sar1b	98	87.603	ENSIPUG00000010046	sar1b	100	85.354	Ictalurus_punctatus
ENSSDUG00000020926	sar1b	100	92.424	ENSIPUG00000020925	sar1b	100	92.424	Ictalurus_punctatus
ENSSDUG00000020926	sar1b	100	84.343	ENSKMAG00000014875	-	100	84.343	Kryptolebias_marmoratus
ENSSDUG00000020926	sar1b	100	95.455	ENSKMAG00000019693	sar1b	100	95.455	Kryptolebias_marmoratus
ENSSDUG00000020926	sar1b	100	92.929	ENSLBEG00000027550	sar1b	100	92.929	Labrus_bergylta
ENSSDUG00000020926	sar1b	94	92.241	ENSLBEG00000016945	-	100	85.859	Labrus_bergylta
ENSSDUG00000020926	sar1b	100	72.864	ENSLACG00000017029	-	100	72.864	Latimeria_chalumnae
ENSSDUG00000020926	sar1b	100	87.374	ENSLACG00000010795	sar1b	100	87.374	Latimeria_chalumnae
ENSSDUG00000020926	sar1b	100	93.434	ENSLOCG00000010197	sar1b	100	93.434	Lepisosteus_oculatus
ENSSDUG00000020926	sar1b	100	90.909	ENSLOCG00000005214	-	100	90.909	Lepisosteus_oculatus
ENSSDUG00000020926	sar1b	100	94.949	ENSMAMG00000021732	sar1b	100	94.949	Mastacembelus_armatus
ENSSDUG00000020926	sar1b	100	84.848	ENSMZEG00005001012	-	100	84.848	Maylandia_zebra
ENSSDUG00000020926	sar1b	100	94.444	ENSMZEG00005008942	sar1b	100	94.444	Maylandia_zebra
ENSSDUG00000020926	sar1b	90	92.179	ENSMGAG00000005387	-	91	92.179	Meleagris_gallopavo
ENSSDUG00000020926	sar1b	94	90.517	ENSMMOG00000013803	-	100	84.343	Mola_mola
ENSSDUG00000020926	sar1b	100	95.455	ENSMALG00000016635	sar1b	97	93.407	Monopterus_albus
ENSSDUG00000020926	sar1b	100	84.848	ENSNBRG00000014004	-	100	84.848	Neolamprologus_brichardi
ENSSDUG00000020926	sar1b	100	94.949	ENSNBRG00000008013	sar1b	100	94.949	Neolamprologus_brichardi
ENSSDUG00000020926	sar1b	100	95.960	ENSONIG00000017278	sar1b	100	95.960	Oreochromis_niloticus
ENSSDUG00000020926	sar1b	100	93.939	ENSORLG00000000932	sar1b	100	93.939	Oryzias_latipes
ENSSDUG00000020926	sar1b	100	93.939	ENSORLG00020021985	sar1b	100	93.939	Oryzias_latipes_hni
ENSSDUG00000020926	sar1b	100	93.939	ENSORLG00015007044	sar1b	100	93.939	Oryzias_latipes_hsok
ENSSDUG00000020926	sar1b	100	94.444	ENSOMEG00000001052	sar1b	100	94.444	Oryzias_melastigma
ENSSDUG00000020926	sar1b	100	93.939	ENSPKIG00000017353	-	100	93.939	Paramormyrops_kingsleyae
ENSSDUG00000020926	sar1b	100	93.434	ENSPKIG00000010688	sar1b	100	93.434	Paramormyrops_kingsleyae
ENSSDUG00000020926	sar1b	94	95.690	ENSPMGG00000001234	sar1b	91	95.690	Periophthalmus_magnuspinnatus
ENSSDUG00000020926	sar1b	100	85.075	ENSPMAG00000003593	sar1b	100	85.075	Petromyzon_marinus
ENSSDUG00000020926	sar1b	100	93.939	ENSPFOG00000005666	sar1b	100	93.939	Poecilia_formosa
ENSSDUG00000020926	sar1b	100	94.444	ENSPLAG00000012223	sar1b	100	94.444	Poecilia_latipinna
ENSSDUG00000020926	sar1b	96	87.395	ENSPLAG00000001016	-	77	87.395	Poecilia_latipinna
ENSSDUG00000020926	sar1b	100	93.939	ENSPMEG00000016831	sar1b	100	93.939	Poecilia_mexicana
ENSSDUG00000020926	sar1b	100	93.939	ENSPREG00000005312	sar1b	90	93.939	Poecilia_reticulata
ENSSDUG00000020926	sar1b	97	84.127	ENSPREG00000002020	-	93	84.127	Poecilia_reticulata
ENSSDUG00000020926	sar1b	100	84.848	ENSPNYG00000021357	-	100	84.848	Pundamilia_nyererei
ENSSDUG00000020926	sar1b	100	94.444	ENSPNYG00000012440	sar1b	100	94.444	Pundamilia_nyererei
ENSSDUG00000020926	sar1b	100	93.434	ENSPNAG00000014683	sar1b	100	93.434	Pygocentrus_nattereri
ENSSDUG00000020926	sar1b	100	86.869	ENSPNAG00000001123	-	100	86.869	Pygocentrus_nattereri
ENSSDUG00000020926	sar1b	100	93.434	ENSSFOG00015020051	sar1b	100	93.434	Scleropages_formosus
ENSSDUG00000020926	sar1b	100	92.424	ENSSFOG00015018128	-	100	92.424	Scleropages_formosus
ENSSDUG00000020926	sar1b	100	85.354	ENSSMAG00000002165	-	100	85.354	Scophthalmus_maximus
ENSSDUG00000020926	sar1b	100	93.434	ENSSMAG00000007106	sar1b	80	93.434	Scophthalmus_maximus
ENSSDUG00000020926	sar1b	100	84.848	ENSSLDG00000024197	-	100	84.848	Seriola_lalandi_dorsalis
ENSSDUG00000020926	sar1b	100	100.000	ENSSLDG00000017052	sar1b	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000020926	sar1b	100	90.404	ENSSPUG00000010247	-	100	90.404	Sphenodon_punctatus
ENSSDUG00000020926	sar1b	94	91.379	ENSSPAG00000015626	-	100	84.848	Stegastes_partitus
ENSSDUG00000020926	sar1b	100	95.455	ENSSPAG00000017634	sar1b	100	95.455	Stegastes_partitus
ENSSDUG00000020926	sar1b	100	90.909	ENSTRUG00000023908	sar1b	100	90.909	Takifugu_rubripes
ENSSDUG00000020926	sar1b	100	92.424	ENSTNIG00000016097	sar1b	100	92.424	Tetraodon_nigroviridis
ENSSDUG00000020926	sar1b	93	87.826	ENSXCOG00000006154	-	81	85.000	Xiphophorus_couchianus
ENSSDUG00000020926	sar1b	90	93.820	ENSXCOG00000004160	sar1b	87	93.820	Xiphophorus_couchianus
ENSSDUG00000020926	sar1b	100	93.939	ENSXMAG00000008294	sar1b	100	93.939	Xiphophorus_maculatus