EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000020977 (Gene tree)
Gene ID: 111221922
Gene Symbol: lsm14b
Alias: zRAP55|zgc:55673
Full Name: protein LSM14 homolog B-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3288 bases
Position: chrBDQW01000088.1:8240104-8243391
Accession: 111221922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000029089	FDF	PF09532.10	3e-11	1	1
ENSSDUP00000029089	SM-ATX	PF14438.6	1.1e-08	1	1
ENSSDUP00000029089	LSM14	PF12701.7	1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000029583	-	2462	XM_022745516	ENSSDUP00000029089	374 (aa)	XP_022601237	-

Gene Model

Click here to download ENSSDUG00000020977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000020977's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000020977	lsm14b	92	40.704	ENSSDUG00000007229	lsm14ab	85	43.333
ENSSDUG00000020977	lsm14b	92	54.144	ENSSDUG00000022770	LSM14B	90	53.107
ENSSDUG00000020977	lsm14b	92	40.049	ENSSDUG00000000495	lsm14aa	86	40.662

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000020977	lsm14b	92	55.733	ENSG00000149657	LSM14B	100	53.846	Homo_sapiens
ENSSDUG00000020977	lsm14b	100	87.433	ENSAPOG00000001780	lsm14b	100	87.433	Acanthochromis_polyacanthus
ENSSDUG00000020977	lsm14b	91	48.284	ENSAMEG00000013430	LSM14B	91	47.891	Ailuropoda_melanoleuca
ENSSDUG00000020977	lsm14b	62	36.179	ENSACIG00000003147	LSM14B	87	36.626	Amphilophus_citrinellus
ENSSDUG00000020977	lsm14b	99	77.236	ENSACIG00000012266	lsm14b	99	75.610	Amphilophus_citrinellus
ENSSDUG00000020977	lsm14b	98	49.870	ENSAOCG00000006667	LSM14B	89	50.000	Amphiprion_ocellaris
ENSSDUG00000020977	lsm14b	100	88.770	ENSAOCG00000012380	lsm14b	100	88.770	Amphiprion_ocellaris
ENSSDUG00000020977	lsm14b	100	75.401	ENSAPEG00000023633	lsm14b	100	75.401	Amphiprion_percula
ENSSDUG00000020977	lsm14b	100	78.042	ENSATEG00000016603	lsm14b	100	81.481	Anabas_testudineus
ENSSDUG00000020977	lsm14b	66	43.836	ENSATEG00000015895	LSM14B	87	43.253	Anabas_testudineus
ENSSDUG00000020977	lsm14b	82	46.322	ENSAPLG00000013203	LSM14B	89	45.304	Anas_platyrhynchos
ENSSDUG00000020977	lsm14b	99	54.020	ENSACAG00000016195	LSM14B	90	55.125	Anolis_carolinensis
ENSSDUG00000020977	lsm14b	92	55.978	ENSANAG00000037915	LSM14B	90	55.647	Aotus_nancymaae
ENSSDUG00000020977	lsm14b	100	80.214	ENSACLG00000019663	lsm14b	100	80.214	Astatotilapia_calliptera
ENSSDUG00000020977	lsm14b	90	60.942	ENSAMXG00000002865	lsm14b	90	62.707	Astyanax_mexicanus
ENSSDUG00000020977	lsm14b	92	49.512	ENSBTAG00000021558	LSM14B	91	48.889	Bos_taurus
ENSSDUG00000020977	lsm14b	92	56.250	ENSCJAG00000014434	LSM14B	90	55.923	Callithrix_jacchus
ENSSDUG00000020977	lsm14b	82	45.135	ENSCAFG00000012518	LSM14B	89	44.236	Canis_familiaris
ENSSDUG00000020977	lsm14b	92	54.447	ENSCAFG00020022150	LSM14B	90	53.476	Canis_lupus_dingo
ENSSDUG00000020977	lsm14b	92	54.987	ENSCHIG00000010284	-	90	54.247	Capra_hircus
ENSSDUG00000020977	lsm14b	99	39.899	ENSCHIG00000022681	-	90	39.833	Capra_hircus
ENSSDUG00000020977	lsm14b	81	52.439	ENSTSYG00000031914	LSM14B	79	51.084	Carlito_syrichta
ENSSDUG00000020977	lsm14b	81	51.368	ENSCAPG00000013059	LSM14B	89	50.309	Cavia_aperea
ENSSDUG00000020977	lsm14b	81	51.524	ENSCPOG00000038080	LSM14B	89	50.464	Cavia_porcellus
ENSSDUG00000020977	lsm14b	92	55.946	ENSCCAG00000021267	LSM14B	90	55.647	Cebus_capucinus
ENSSDUG00000020977	lsm14b	92	40.000	ENSCCAG00000024900	-	76	39.418	Cebus_capucinus
ENSSDUG00000020977	lsm14b	92	56.000	ENSCATG00000036006	LSM14B	90	54.595	Cercocebus_atys
ENSSDUG00000020977	lsm14b	81	50.915	ENSCLAG00000003186	LSM14B	100	50.556	Chinchilla_lanigera
ENSSDUG00000020977	lsm14b	92	50.240	ENSCSAG00000015729	LSM14B	91	49.398	Chlorocebus_sabaeus
ENSSDUG00000020977	lsm14b	68	34.892	ENSCHOG00000006997	-	86	34.979	Choloepus_hoffmanni
ENSSDUG00000020977	lsm14b	91	50.248	ENSCPBG00000027065	LSM14B	91	50.376	Chrysemys_picta_bellii
ENSSDUG00000020977	lsm14b	81	51.775	ENSCANG00000036986	LSM14B	89	50.602	Colobus_angolensis_palliatus
ENSSDUG00000020977	lsm14b	92	55.435	ENSCGRG00001018399	Lsm14b	90	55.096	Cricetulus_griseus_chok1gshd
ENSSDUG00000020977	lsm14b	54	40.639	ENSCGRG00000002484	-	82	37.850	Cricetulus_griseus_crigri
ENSSDUG00000020977	lsm14b	61	39.310	ENSCGRG00000006111	-	90	39.007	Cricetulus_griseus_crigri
ENSSDUG00000020977	lsm14b	100	80.475	ENSCSEG00000004722	lsm14b	100	80.475	Cynoglossus_semilaevis
ENSSDUG00000020977	lsm14b	97	48.698	ENSCSEG00000020669	LSM14B	91	47.339	Cynoglossus_semilaevis
ENSSDUG00000020977	lsm14b	64	39.113	ENSCVAG00000012433	-	89	38.494	Cyprinodon_variegatus
ENSSDUG00000020977	lsm14b	99	57.614	ENSDARG00000025386	lsm14b	99	57.722	Danio_rerio
ENSSDUG00000020977	lsm14b	61	39.175	ENSDNOG00000025246	LSM14B	88	39.510	Dasypus_novemcinctus
ENSSDUG00000020977	lsm14b	82	50.453	ENSDORG00000016683	Lsm14b	78	50.000	Dipodomys_ordii
ENSSDUG00000020977	lsm14b	57	39.076	ENSETEG00000011188	-	99	40.239	Echinops_telfairi
ENSSDUG00000020977	lsm14b	93	45.232	ENSETEG00000001869	-	89	42.416	Echinops_telfairi
ENSSDUG00000020977	lsm14b	61	43.443	ENSEASG00005023218	LSM14B	88	38.732	Equus_asinus_asinus
ENSSDUG00000020977	lsm14b	92	54.987	ENSECAG00000010659	LSM14B	90	54.795	Equus_caballus
ENSSDUG00000020977	lsm14b	55	69.000	ENSEEUG00000007331	LSM14B	79	69.000	Erinaceus_europaeus
ENSSDUG00000020977	lsm14b	100	52.685	ENSELUG00000016299	LSM14B	100	52.041	Esox_lucius
ENSSDUG00000020977	lsm14b	99	64.508	ENSELUG00000005780	lsm14b	99	63.636	Esox_lucius
ENSSDUG00000020977	lsm14b	92	56.369	ENSFCAG00000003248	LSM14B	90	54.570	Felis_catus
ENSSDUG00000020977	lsm14b	82	46.322	ENSFALG00000010618	LSM14B	90	45.304	Ficedula_albicollis
ENSSDUG00000020977	lsm14b	81	51.692	ENSFDAG00000002214	LSM14B	89	50.938	Fukomys_damarensis
ENSSDUG00000020977	lsm14b	71	51.264	ENSFHEG00000003362	LSM14B	71	51.220	Fundulus_heteroclitus
ENSSDUG00000020977	lsm14b	100	75.668	ENSFHEG00000006237	lsm14b	100	75.668	Fundulus_heteroclitus
ENSSDUG00000020977	lsm14b	100	67.989	ENSGMOG00000017115	lsm14b	99	64.286	Gadus_morhua
ENSSDUG00000020977	lsm14b	91	54.472	ENSGALG00000005125	LSM14B	90	52.486	Gallus_gallus
ENSSDUG00000020977	lsm14b	100	70.479	ENSGAFG00000020318	lsm14b	100	70.479	Gambusia_affinis
ENSSDUG00000020977	lsm14b	64	40.157	ENSGAFG00000013723	LSM14B	85	37.607	Gambusia_affinis
ENSSDUG00000020977	lsm14b	99	79.787	ENSGACG00000009973	lsm14b	99	79.787	Gasterosteus_aculeatus
ENSSDUG00000020977	lsm14b	55	41.964	ENSGAGG00000004106	LSM14B	78	44.749	Gopherus_agassizii
ENSSDUG00000020977	lsm14b	82	51.183	ENSGGOG00000005630	LSM14B	85	49.850	Gorilla_gorilla
ENSSDUG00000020977	lsm14b	92	55.256	ENSHGLG00000015055	LSM14B	90	54.098	Heterocephalus_glaber_female
ENSSDUG00000020977	lsm14b	81	50.613	ENSHGLG00100015273	LSM14B	89	50.156	Heterocephalus_glaber_male
ENSSDUG00000020977	lsm14b	96	48.549	ENSHCOG00000018747	LSM14B	91	46.067	Hippocampus_comes
ENSSDUG00000020977	lsm14b	69	59.004	ENSHCOG00000004867	lsm14b	100	57.088	Hippocampus_comes
ENSSDUG00000020977	lsm14b	91	61.560	ENSIPUG00000014946	lsm14b	85	62.254	Ictalurus_punctatus
ENSSDUG00000020977	lsm14b	81	51.829	ENSSTOG00000020482	LSM14B	89	51.393	Ictidomys_tridecemlineatus
ENSSDUG00000020977	lsm14b	91	53.571	ENSJJAG00000012728	Lsm14b	89	50.418	Jaculus_jaculus
ENSSDUG00000020977	lsm14b	52	41.627	ENSKMAG00000012834	-	86	43.000	Kryptolebias_marmoratus
ENSSDUG00000020977	lsm14b	100	75.134	ENSKMAG00000017524	lsm14b	100	74.866	Kryptolebias_marmoratus
ENSSDUG00000020977	lsm14b	66	40.945	ENSLBEG00000007951	LSM14B	85	38.362	Labrus_bergylta
ENSSDUG00000020977	lsm14b	89	76.087	ENSLACG00000003849	LSM14B	78	76.087	Latimeria_chalumnae
ENSSDUG00000020977	lsm14b	90	59.718	ENSLOCG00000003746	lsm14b	99	58.824	Lepisosteus_oculatus
ENSSDUG00000020977	lsm14b	82	48.802	ENSLAFG00000007492	LSM14B	89	49.847	Loxodonta_africana
ENSSDUG00000020977	lsm14b	92	55.733	ENSMFAG00000041479	LSM14B	90	54.595	Macaca_fascicularis
ENSSDUG00000020977	lsm14b	92	55.733	ENSMMUG00000014084	LSM14B	90	54.595	Macaca_mulatta
ENSSDUG00000020977	lsm14b	92	55.733	ENSMNEG00000045573	LSM14B	90	54.595	Macaca_nemestrina
ENSSDUG00000020977	lsm14b	81	52.108	ENSMLEG00000040895	LSM14B	89	50.459	Mandrillus_leucophaeus
ENSSDUG00000020977	lsm14b	100	80.902	ENSMAMG00000020539	lsm14b	100	80.902	Mastacembelus_armatus
ENSSDUG00000020977	lsm14b	97	52.815	ENSMAMG00000024124	LSM14B	90	52.738	Mastacembelus_armatus
ENSSDUG00000020977	lsm14b	91	50.556	ENSMZEG00005026001	LSM14B	93	50.565	Maylandia_zebra
ENSSDUG00000020977	lsm14b	100	80.053	ENSMZEG00005000987	lsm14b	100	79.521	Maylandia_zebra
ENSSDUG00000020977	lsm14b	83	50.592	ENSMGAG00000005300	LSM14B	89	48.338	Meleagris_gallopavo
ENSSDUG00000020977	lsm14b	92	55.738	ENSMAUG00000020700	Lsm14b	90	53.552	Mesocricetus_auratus
ENSSDUG00000020977	lsm14b	92	55.978	ENSMICG00000014675	LSM14B	90	55.464	Microcebus_murinus
ENSSDUG00000020977	lsm14b	92	55.220	ENSMOCG00000020600	Lsm14b	90	54.875	Microtus_ochrogaster
ENSSDUG00000020977	lsm14b	62	38.376	ENSMOCG00000005119	-	91	36.981	Microtus_ochrogaster
ENSSDUG00000020977	lsm14b	90	73.077	ENSMMOG00000020042	lsm14b	93	73.077	Mola_mola
ENSSDUG00000020977	lsm14b	90	52.707	ENSMMOG00000017321	LSM14B	89	49.288	Mola_mola
ENSSDUG00000020977	lsm14b	61	41.463	ENSMODG00000016690	LSM14B	88	40.714	Monodelphis_domestica
ENSSDUG00000020977	lsm14b	92	49.451	ENSMALG00000022251	LSM14B	90	48.596	Monopterus_albus
ENSSDUG00000020977	lsm14b	100	78.877	ENSMALG00000004783	lsm14b	97	79.310	Monopterus_albus
ENSSDUG00000020977	lsm14b	92	54.918	MGP_CAROLIEiJ_G0024770	Lsm14b	90	54.571	Mus_caroli
ENSSDUG00000020977	lsm14b	92	54.918	ENSMUSG00000039108	Lsm14b	90	54.571	Mus_musculus
ENSSDUG00000020977	lsm14b	92	54.918	MGP_PahariEiJ_G0026214	Lsm14b	90	54.571	Mus_pahari
ENSSDUG00000020977	lsm14b	92	54.918	MGP_SPRETEiJ_G0025693	Lsm14b	90	54.571	Mus_spretus
ENSSDUG00000020977	lsm14b	86	45.078	ENSMPUG00000007584	LSM14B	91	44.357	Mustela_putorius_furo
ENSSDUG00000020977	lsm14b	91	55.956	ENSMLUG00000000304	LSM14B	90	54.743	Myotis_lucifugus
ENSSDUG00000020977	lsm14b	59	40.486	ENSNGAG00000016550	Lsm14b	84	40.952	Nannospalax_galili
ENSSDUG00000020977	lsm14b	81	51.506	ENSNLEG00000015757	LSM14B	89	50.153	Nomascus_leucogenys
ENSSDUG00000020977	lsm14b	66	75.524	ENSMEUG00000008267	-	65	75.524	Notamacropus_eugenii
ENSSDUG00000020977	lsm14b	92	55.526	ENSODEG00000004099	LSM14B	90	54.918	Octodon_degus
ENSSDUG00000020977	lsm14b	100	81.915	ENSONIG00000020318	lsm14b	100	81.600	Oreochromis_niloticus
ENSSDUG00000020977	lsm14b	74	54.965	ENSOANG00000003370	LSM14B	97	54.194	Ornithorhynchus_anatinus
ENSSDUG00000020977	lsm14b	81	51.198	ENSOCUG00000006279	LSM14B	89	49.850	Oryctolagus_cuniculus
ENSSDUG00000020977	lsm14b	100	78.342	ENSORLG00000013525	lsm14b	100	78.610	Oryzias_latipes
ENSSDUG00000020977	lsm14b	93	46.133	ENSORLG00000028353	LSM14B	91	46.307	Oryzias_latipes
ENSSDUG00000020977	lsm14b	62	35.135	ENSORLG00020018191	-	85	33.600	Oryzias_latipes_hni
ENSSDUG00000020977	lsm14b	100	78.342	ENSORLG00020020553	lsm14b	100	78.610	Oryzias_latipes_hni
ENSSDUG00000020977	lsm14b	93	46.409	ENSORLG00015013157	LSM14B	91	46.591	Oryzias_latipes_hsok
ENSSDUG00000020977	lsm14b	100	78.342	ENSORLG00015016862	lsm14b	100	78.610	Oryzias_latipes_hsok
ENSSDUG00000020977	lsm14b	100	78.075	ENSOMEG00000023917	lsm14b	100	78.342	Oryzias_melastigma
ENSSDUG00000020977	lsm14b	63	37.815	ENSOMEG00000000171	-	83	36.564	Oryzias_melastigma
ENSSDUG00000020977	lsm14b	92	49.756	ENSOGAG00000003915	LSM14B	91	49.383	Otolemur_garnettii
ENSSDUG00000020977	lsm14b	83	45.867	ENSOARG00000014706	LSM14B	88	45.580	Ovis_aries
ENSSDUG00000020977	lsm14b	82	51.183	ENSPPAG00000035799	LSM14B	85	49.850	Pan_paniscus
ENSSDUG00000020977	lsm14b	92	56.369	ENSPPRG00000009197	LSM14B	90	54.570	Panthera_pardus
ENSSDUG00000020977	lsm14b	61	43.320	ENSPTIG00000021518	LSM14B	91	38.832	Panthera_tigris_altaica
ENSSDUG00000020977	lsm14b	92	55.733	ENSPTRG00000013696	LSM14B	90	54.595	Pan_troglodytes
ENSSDUG00000020977	lsm14b	92	55.733	ENSPANG00000011747	LSM14B	90	54.595	Papio_anubis
ENSSDUG00000020977	lsm14b	99	59.542	ENSPKIG00000003275	lsm14b	94	74.766	Paramormyrops_kingsleyae
ENSSDUG00000020977	lsm14b	82	53.495	ENSPSIG00000014762	LSM14B	89	53.086	Pelodiscus_sinensis
ENSSDUG00000020977	lsm14b	91	55.647	ENSPEMG00000017688	Lsm14b	90	54.596	Peromyscus_maniculatus_bairdii
ENSSDUG00000020977	lsm14b	92	57.609	ENSPCIG00000013405	LSM14B	90	57.341	Phascolarctos_cinereus
ENSSDUG00000020977	lsm14b	100	75.467	ENSPFOG00000005631	lsm14b	100	75.467	Poecilia_formosa
ENSSDUG00000020977	lsm14b	100	74.933	ENSPLAG00000002449	lsm14b	100	74.933	Poecilia_latipinna
ENSSDUG00000020977	lsm14b	90	48.433	ENSPLAG00000005793	LSM14B	90	47.536	Poecilia_latipinna
ENSSDUG00000020977	lsm14b	100	75.200	ENSPMEG00000000745	lsm14b	100	75.200	Poecilia_mexicana
ENSSDUG00000020977	lsm14b	90	49.429	ENSPMEG00000022953	LSM14B	90	49.429	Poecilia_mexicana
ENSSDUG00000020977	lsm14b	62	38.889	ENSPREG00000007828	LSM14B	85	39.095	Poecilia_reticulata
ENSSDUG00000020977	lsm14b	92	50.135	ENSPPYG00000011194	LSM14B	90	50.959	Pongo_abelii
ENSSDUG00000020977	lsm14b	92	55.526	ENSPCOG00000013625	LSM14B	90	55.464	Propithecus_coquereli
ENSSDUG00000020977	lsm14b	72	43.493	ENSPVAG00000017918	LSM14B	100	43.731	Pteropus_vampyrus
ENSSDUG00000020977	lsm14b	90	62.817	ENSPNAG00000012777	lsm14b	99	58.398	Pygocentrus_nattereri
ENSSDUG00000020977	lsm14b	92	49.383	ENSRNOG00000054557	Lsm14b	91	49.000	Rattus_norvegicus
ENSSDUG00000020977	lsm14b	81	51.622	ENSRBIG00000033461	LSM14B	88	50.450	Rhinopithecus_bieti
ENSSDUG00000020977	lsm14b	83	52.754	ENSRROG00000042949	LSM14B	81	51.622	Rhinopithecus_roxellana
ENSSDUG00000020977	lsm14b	81	52.000	ENSSBOG00000032820	LSM14B	89	51.084	Saimiri_boliviensis_boliviensis
ENSSDUG00000020977	lsm14b	82	53.354	ENSSHAG00000015528	LSM14B	86	52.960	Sarcophilus_harrisii
ENSSDUG00000020977	lsm14b	91	61.173	ENSSFOG00015004627	lsm14b	91	61.173	Scleropages_formosus
ENSSDUG00000020977	lsm14b	100	90.212	ENSSMAG00000012725	lsm14b	100	90.212	Scophthalmus_maximus
ENSSDUG00000020977	lsm14b	99	51.145	ENSSMAG00000000135	LSM14B	90	51.117	Scophthalmus_maximus
ENSSDUG00000020977	lsm14b	61	47.200	ENSSLDG00000011354	-	87	45.783	Seriola_lalandi_dorsalis
ENSSDUG00000020977	lsm14b	53	39.013	ENSSARG00000007749	-	99	41.256	Sorex_araneus
ENSSDUG00000020977	lsm14b	89	52.975	ENSSPUG00000014360	LSM14B	96	52.975	Sphenodon_punctatus
ENSSDUG00000020977	lsm14b	66	41.176	ENSSPAG00000018854	-	86	38.956	Stegastes_partitus
ENSSDUG00000020977	lsm14b	100	83.690	ENSSPAG00000020915	lsm14b	100	82.353	Stegastes_partitus
ENSSDUG00000020977	lsm14b	92	55.978	ENSSSCG00000026052	LSM14B	75	55.096	Sus_scrofa
ENSSDUG00000020977	lsm14b	82	51.840	ENSTGUG00000007884	LSM14B	89	50.779	Taeniopygia_guttata
ENSSDUG00000020977	lsm14b	100	77.540	ENSTRUG00000011354	lsm14b	100	77.807	Takifugu_rubripes
ENSSDUG00000020977	lsm14b	92	53.611	ENSTRUG00000001529	LSM14B	90	53.541	Takifugu_rubripes
ENSSDUG00000020977	lsm14b	100	72.911	ENSTNIG00000002445	lsm14b	100	71.646	Tetraodon_nigroviridis
ENSSDUG00000020977	lsm14b	90	48.066	ENSUAMG00000025298	LSM14B	89	47.619	Ursus_americanus
ENSSDUG00000020977	lsm14b	90	48.066	ENSUMAG00000000480	LSM14B	89	47.619	Ursus_maritimus
ENSSDUG00000020977	lsm14b	82	50.755	ENSVVUG00000015920	LSM14B	88	49.102	Vulpes_vulpes
ENSSDUG00000020977	lsm14b	85	54.094	ENSXETG00000001997	lsm14b	99	53.801	Xenopus_tropicalis
ENSSDUG00000020977	lsm14b	100	74.064	ENSXMAG00000010013	lsm14b	100	74.064	Xiphophorus_maculatus