EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000021142 (Gene tree)
Gene ID: 111217231
Gene Symbol: larsb
Alias: cb667|lars|wu:fb36b12
Full Name: leucyl-tRNA synthetase
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 24995 bases
Position: chrBDQW01000040.1:5359046-5384040
Accession: 111217231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000029394	tRNA-synt_1g	PF09334.11	1.5e-16	1	2
ENSSDUP00000029394	tRNA-synt_1g	PF09334.11	1.5e-16	2	2
ENSSDUP00000029394	Anticodon_1	PF08264.13	2e-14	1	1
ENSSDUP00000029394	tRNA-synt_1	PF00133.22	9.5e-39	1	2
ENSSDUP00000029394	tRNA-synt_1	PF00133.22	9.5e-39	2	2
ENSSDUP00000029394	tRNA-synt_1e	PF01406.19	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000029889	-	5422	XM_022739008	ENSSDUP00000029394	1184 (aa)	XP_022594729	UPI000BBE96D7

Gene Model

Click here to download ENSSDUG00000021142's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000021142's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000021142	larsb	100	78.632	ENSG00000133706	LARS	100	79.362	Homo_sapiens
ENSSDUG00000021142	larsb	100	94.604	ENSAPOG00000010585	larsb	100	94.911	Acanthochromis_polyacanthus
ENSSDUG00000021142	larsb	99	78.970	ENSAMEG00000017584	LARS	100	78.970	Ailuropoda_melanoleuca
ENSSDUG00000021142	larsb	100	93.002	ENSACIG00000014026	larsb	100	93.002	Amphilophus_citrinellus
ENSSDUG00000021142	larsb	100	95.946	ENSAOCG00000016931	larsb	100	95.946	Amphiprion_ocellaris
ENSSDUG00000021142	larsb	100	96.030	ENSAPEG00000017720	larsb	100	96.030	Amphiprion_percula
ENSSDUG00000021142	larsb	100	90.051	ENSATEG00000010441	larsb	99	89.966	Anabas_testudineus
ENSSDUG00000021142	larsb	96	79.703	ENSAPLG00000008145	LARS	100	80.052	Anas_platyrhynchos
ENSSDUG00000021142	larsb	100	78.041	ENSACAG00000013916	LARS	100	78.125	Anolis_carolinensis
ENSSDUG00000021142	larsb	100	69.595	ENSANAG00000014375	LARS	100	69.595	Aotus_nancymaae
ENSSDUG00000021142	larsb	100	94.595	ENSACLG00000010881	larsb	100	94.595	Astatotilapia_calliptera
ENSSDUG00000021142	larsb	100	88.439	ENSAMXG00000019979	larsb	100	88.439	Astyanax_mexicanus
ENSSDUG00000021142	larsb	100	78.041	ENSBTAG00000006765	LARS	100	78.041	Bos_taurus
ENSSDUG00000021142	larsb	99	55.369	WBGene00003073	lars-1	99	55.369	Caenorhabditis_elegans
ENSSDUG00000021142	larsb	100	78.716	ENSCJAG00000021314	LARS	100	79.362	Callithrix_jacchus
ENSSDUG00000021142	larsb	100	79.392	ENSCAFG00000006431	LARS	100	79.392	Canis_familiaris
ENSSDUG00000021142	larsb	99	79.442	ENSCAFG00020025009	LARS	99	79.442	Canis_lupus_dingo
ENSSDUG00000021142	larsb	100	78.378	ENSCHIG00000014949	LARS	100	78.378	Capra_hircus
ENSSDUG00000021142	larsb	100	78.041	ENSTSYG00000001253	LARS	100	78.041	Carlito_syrichta
ENSSDUG00000021142	larsb	96	62.577	ENSCAPG00000015676	LARS	97	62.752	Cavia_aperea
ENSSDUG00000021142	larsb	100	77.111	ENSCPOG00000012329	LARS	100	77.111	Cavia_porcellus
ENSSDUG00000021142	larsb	100	78.970	ENSCCAG00000020789	LARS	100	78.970	Cebus_capucinus
ENSSDUG00000021142	larsb	97	78.938	ENSCATG00000033463	LARS	100	79.185	Cercocebus_atys
ENSSDUG00000021142	larsb	100	77.956	ENSCLAG00000011193	LARS	100	77.956	Chinchilla_lanigera
ENSSDUG00000021142	larsb	99	78.565	ENSCSAG00000012280	LARS	97	78.565	Chlorocebus_sabaeus
ENSSDUG00000021142	larsb	90	71.882	ENSCHOG00000009309	LARS	90	71.882	Choloepus_hoffmanni
ENSSDUG00000021142	larsb	99	80.220	ENSCPBG00000008415	LARS	99	81.076	Chrysemys_picta_bellii
ENSSDUG00000021142	larsb	98	65.039	ENSCING00000008535	-	98	64.353	Ciona_intestinalis
ENSSDUG00000021142	larsb	99	63.415	ENSCSAVG00000009040	-	100	67.762	Ciona_savignyi
ENSSDUG00000021142	larsb	100	78.632	ENSCANG00000031137	LARS	100	78.632	Colobus_angolensis_palliatus
ENSSDUG00000021142	larsb	93	73.066	ENSCGRG00001004647	Lars	99	73.066	Cricetulus_griseus_chok1gshd
ENSSDUG00000021142	larsb	100	74.768	ENSCGRG00000007284	Lars	100	74.768	Cricetulus_griseus_crigri
ENSSDUG00000021142	larsb	100	93.339	ENSCSEG00000014984	larsb	100	93.255	Cynoglossus_semilaevis
ENSSDUG00000021142	larsb	100	94.257	ENSCVAG00000014685	larsb	100	94.257	Cyprinodon_variegatus
ENSSDUG00000021142	larsb	67	88.110	ENSDARG00000019280	larsb	100	88.110	Danio_rerio
ENSSDUG00000021142	larsb	96	77.661	ENSDNOG00000017963	LARS	100	78.185	Dasypus_novemcinctus
ENSSDUG00000021142	larsb	100	73.609	ENSDORG00000014913	Lars	100	73.609	Dipodomys_ordii
ENSSDUG00000021142	larsb	99	58.305	FBgn0284253	LeuRS	99	58.725	Drosophila_melanogaster
ENSSDUG00000021142	larsb	94	64.004	ENSETEG00000003145	LARS	100	64.004	Echinops_telfairi
ENSSDUG00000021142	larsb	92	59.381	ENSEBUG00000014985	larsb	97	58.235	Eptatretus_burgeri
ENSSDUG00000021142	larsb	100	78.970	ENSEASG00005020569	LARS	100	79.339	Equus_asinus_asinus
ENSSDUG00000021142	larsb	100	78.885	ENSECAG00000008963	LARS	100	79.539	Equus_caballus
ENSSDUG00000021142	larsb	92	64.269	ENSEEUG00000014854	LARS	92	64.269	Erinaceus_europaeus
ENSSDUG00000021142	larsb	100	86.655	ENSELUG00000023311	larsb	100	86.655	Esox_lucius
ENSSDUG00000021142	larsb	99	78.849	ENSFCAG00000008715	LARS	100	80.262	Felis_catus
ENSSDUG00000021142	larsb	100	79.662	ENSFALG00000003209	LARS	93	79.747	Ficedula_albicollis
ENSSDUG00000021142	larsb	100	77.280	ENSFDAG00000020764	LARS	100	77.365	Fukomys_damarensis
ENSSDUG00000021142	larsb	91	93.553	ENSFHEG00000010437	larsb	100	93.553	Fundulus_heteroclitus
ENSSDUG00000021142	larsb	99	87.489	ENSGMOG00000013645	larsb	99	87.489	Gadus_morhua
ENSSDUG00000021142	larsb	100	80.185	ENSGALG00000007494	LARS	100	80.270	Gallus_gallus
ENSSDUG00000021142	larsb	100	92.905	ENSGAFG00000005029	larsb	100	92.905	Gambusia_affinis
ENSSDUG00000021142	larsb	99	91.455	ENSGACG00000020720	larsb	99	91.455	Gasterosteus_aculeatus
ENSSDUG00000021142	larsb	99	79.290	ENSGAGG00000002353	LARS	99	79.205	Gopherus_agassizii
ENSSDUG00000021142	larsb	100	78.547	ENSGGOG00000004103	LARS	100	78.547	Gorilla_gorilla
ENSSDUG00000021142	larsb	99	92.445	ENSHBUG00000003051	larsb	100	94.374	Haplochromis_burtoni
ENSSDUG00000021142	larsb	100	77.703	ENSHGLG00000006937	LARS	100	77.703	Heterocephalus_glaber_female
ENSSDUG00000021142	larsb	100	77.703	ENSHGLG00100002801	LARS	100	77.703	Heterocephalus_glaber_male
ENSSDUG00000021142	larsb	99	91.293	ENSHCOG00000003651	larsb	100	91.293	Hippocampus_comes
ENSSDUG00000021142	larsb	99	85.389	ENSIPUG00000010756	lars	100	85.751	Ictalurus_punctatus
ENSSDUG00000021142	larsb	100	78.463	ENSSTOG00000002356	LARS	100	78.463	Ictidomys_tridecemlineatus
ENSSDUG00000021142	larsb	100	77.196	ENSJJAG00000015265	Lars	100	77.196	Jaculus_jaculus
ENSSDUG00000021142	larsb	100	93.924	ENSKMAG00000009903	larsb	100	94.177	Kryptolebias_marmoratus
ENSSDUG00000021142	larsb	100	94.599	ENSLBEG00000025237	larsb	100	94.599	Labrus_bergylta
ENSSDUG00000021142	larsb	100	79.040	ENSLACG00000009321	LARS	100	79.545	Latimeria_chalumnae
ENSSDUG00000021142	larsb	99	83.601	ENSLOCG00000010442	larsb	100	83.432	Lepisosteus_oculatus
ENSSDUG00000021142	larsb	99	78.294	ENSLAFG00000000318	LARS	100	78.257	Loxodonta_africana
ENSSDUG00000021142	larsb	100	78.632	ENSMFAG00000038685	LARS	100	78.632	Macaca_fascicularis
ENSSDUG00000021142	larsb	100	78.632	ENSMMUG00000029787	LARS	100	78.632	Macaca_mulatta
ENSSDUG00000021142	larsb	99	76.650	ENSMNEG00000044014	LARS	99	76.650	Macaca_nemestrina
ENSSDUG00000021142	larsb	99	78.680	ENSMLEG00000037563	LARS	99	78.680	Mandrillus_leucophaeus
ENSSDUG00000021142	larsb	100	95.524	ENSMAMG00000021385	larsb	100	95.524	Mastacembelus_armatus
ENSSDUG00000021142	larsb	100	94.510	ENSMZEG00005002662	larsb	100	94.510	Maylandia_zebra
ENSSDUG00000021142	larsb	96	80.402	ENSMGAG00000009388	LARS	100	80.840	Meleagris_gallopavo
ENSSDUG00000021142	larsb	99	67.513	ENSMAUG00000003063	Lars	94	77.966	Mesocricetus_auratus
ENSSDUG00000021142	larsb	100	78.970	ENSMICG00000035589	-	100	78.970	Microcebus_murinus
ENSSDUG00000021142	larsb	100	65.456	ENSMICG00000035435	-	100	65.456	Microcebus_murinus
ENSSDUG00000021142	larsb	100	76.962	ENSMOCG00000002092	Lars	100	76.962	Microtus_ochrogaster
ENSSDUG00000021142	larsb	100	90.092	ENSMMOG00000013802	larsb	100	90.008	Mola_mola
ENSSDUG00000021142	larsb	99	73.181	ENSMODG00000010231	LARS	99	73.181	Monodelphis_domestica
ENSSDUG00000021142	larsb	99	91.926	ENSMALG00000018444	larsb	99	91.926	Monopterus_albus
ENSSDUG00000021142	larsb	100	76.962	MGP_CAROLIEiJ_G0022225	Lars	100	76.962	Mus_caroli
ENSSDUG00000021142	larsb	100	76.624	ENSMUSG00000024493	Lars	100	76.624	Mus_musculus
ENSSDUG00000021142	larsb	100	76.793	MGP_PahariEiJ_G0018958	Lars	100	76.793	Mus_pahari
ENSSDUG00000021142	larsb	100	76.962	MGP_SPRETEiJ_G0023135	Lars	100	76.962	Mus_spretus
ENSSDUG00000021142	larsb	100	78.970	ENSMPUG00000007844	LARS	100	78.970	Mustela_putorius_furo
ENSSDUG00000021142	larsb	99	78.022	ENSMLUG00000001125	LARS	100	78.022	Myotis_lucifugus
ENSSDUG00000021142	larsb	100	76.689	ENSNGAG00000011596	Lars	100	76.689	Nannospalax_galili
ENSSDUG00000021142	larsb	100	94.426	ENSNBRG00000005764	larsb	100	94.426	Neolamprologus_brichardi
ENSSDUG00000021142	larsb	99	78.257	ENSNLEG00000009816	LARS	99	78.257	Nomascus_leucogenys
ENSSDUG00000021142	larsb	53	81.982	ENSMEUG00000002332	-	60	74.913	Notamacropus_eugenii
ENSSDUG00000021142	larsb	78	81.720	ENSOPRG00000003076	LARS	83	81.720	Ochotona_princeps
ENSSDUG00000021142	larsb	99	75.465	ENSODEG00000004882	LARS	100	75.465	Octodon_degus
ENSSDUG00000021142	larsb	100	95.017	ENSONIG00000008493	larsb	100	95.017	Oreochromis_niloticus
ENSSDUG00000021142	larsb	100	75.946	ENSOANG00000005755	LARS	100	75.946	Ornithorhynchus_anatinus
ENSSDUG00000021142	larsb	100	78.547	ENSOCUG00000015684	LARS	100	78.547	Oryctolagus_cuniculus
ENSSDUG00000021142	larsb	100	93.750	ENSORLG00000001622	larsb	100	93.750	Oryzias_latipes
ENSSDUG00000021142	larsb	100	93.750	ENSORLG00020019950	larsb	100	93.750	Oryzias_latipes_hni
ENSSDUG00000021142	larsb	100	93.919	ENSORLG00015003895	larsb	100	93.919	Oryzias_latipes_hsok
ENSSDUG00000021142	larsb	100	93.750	ENSOMEG00000005677	larsb	100	93.750	Oryzias_melastigma
ENSSDUG00000021142	larsb	96	76.435	ENSOGAG00000008750	LARS	100	76.435	Otolemur_garnettii
ENSSDUG00000021142	larsb	99	78.191	ENSOARG00000002454	-	100	78.191	Ovis_aries
ENSSDUG00000021142	larsb	100	78.125	ENSOARG00000015911	-	99	78.125	Ovis_aries
ENSSDUG00000021142	larsb	99	78.596	ENSPPAG00000027964	LARS	99	78.596	Pan_paniscus
ENSSDUG00000021142	larsb	100	78.970	ENSPPRG00000023492	LARS	100	78.970	Panthera_pardus
ENSSDUG00000021142	larsb	100	78.885	ENSPTIG00000013110	LARS	100	78.885	Panthera_tigris_altaica
ENSSDUG00000021142	larsb	100	78.463	ENSPTRG00000017372	LARS	100	78.463	Pan_troglodytes
ENSSDUG00000021142	larsb	100	78.632	ENSPANG00000002663	LARS	100	78.632	Papio_anubis
ENSSDUG00000021142	larsb	98	84.542	ENSPKIG00000006650	larsb	99	81.987	Paramormyrops_kingsleyae
ENSSDUG00000021142	larsb	99	79.882	ENSPSIG00000015641	LARS	100	79.797	Pelodiscus_sinensis
ENSSDUG00000021142	larsb	68	93.750	ENSPMGG00000019556	LARS	100	93.750	Periophthalmus_magnuspinnatus
ENSSDUG00000021142	larsb	100	72.996	ENSPEMG00000010933	Lars	100	72.996	Peromyscus_maniculatus_bairdii
ENSSDUG00000021142	larsb	50	60.862	ENSPMAG00000005301	larsb	99	60.862	Petromyzon_marinus
ENSSDUG00000021142	larsb	100	77.365	ENSPCIG00000030572	LARS	100	77.365	Phascolarctos_cinereus
ENSSDUG00000021142	larsb	100	93.328	ENSPFOG00000002361	larsb	100	93.328	Poecilia_formosa
ENSSDUG00000021142	larsb	100	93.328	ENSPLAG00000016550	larsb	100	93.328	Poecilia_latipinna
ENSSDUG00000021142	larsb	100	93.243	ENSPMEG00000018422	larsb	100	93.243	Poecilia_mexicana
ENSSDUG00000021142	larsb	100	93.159	ENSPREG00000005668	larsb	100	93.159	Poecilia_reticulata
ENSSDUG00000021142	larsb	99	76.819	ENSPPYG00000015908	LARS	97	76.819	Pongo_abelii
ENSSDUG00000021142	larsb	89	71.875	ENSPCAG00000005621	LARS	99	71.875	Procavia_capensis
ENSSDUG00000021142	larsb	100	77.703	ENSPCOG00000019325	LARS	100	77.703	Propithecus_coquereli
ENSSDUG00000021142	larsb	96	68.118	ENSPVAG00000011237	LARS	100	70.429	Pteropus_vampyrus
ENSSDUG00000021142	larsb	100	94.341	ENSPNYG00000015254	larsb	100	94.341	Pundamilia_nyererei
ENSSDUG00000021142	larsb	100	86.824	ENSPNAG00000027191	larsb	100	86.824	Pygocentrus_nattereri
ENSSDUG00000021142	larsb	100	76.624	ENSRNOG00000018304	Lars	100	76.624	Rattus_norvegicus
ENSSDUG00000021142	larsb	94	77.469	ENSRBIG00000043198	LARS	99	77.469	Rhinopithecus_bieti
ENSSDUG00000021142	larsb	90	45.750	YPL160W	CDC60	99	45.750	Saccharomyces_cerevisiae
ENSSDUG00000021142	larsb	99	76.311	ENSSBOG00000026661	LARS	100	79.227	Saimiri_boliviensis_boliviensis
ENSSDUG00000021142	larsb	100	78.734	ENSSHAG00000006084	LARS	100	78.734	Sarcophilus_harrisii
ENSSDUG00000021142	larsb	97	84.965	ENSSFOG00015018117	larsb	90	84.965	Scleropages_formosus
ENSSDUG00000021142	larsb	88	95.494	ENSSMAG00000004078	larsb	97	95.590	Scophthalmus_maximus
ENSSDUG00000021142	larsb	100	99.662	ENSSLDG00000007054	larsb	100	99.662	Seriola_lalandi_dorsalis
ENSSDUG00000021142	larsb	85	70.714	ENSSARG00000013481	LARS	83	75.424	Sorex_araneus
ENSSDUG00000021142	larsb	100	78.836	ENSSPUG00000013805	LARS	100	79.427	Sphenodon_punctatus
ENSSDUG00000021142	larsb	100	96.030	ENSSPAG00000012124	larsb	100	96.030	Stegastes_partitus
ENSSDUG00000021142	larsb	100	75.591	ENSSSCG00000014411	LARS	100	75.591	Sus_scrofa
ENSSDUG00000021142	larsb	99	79.628	ENSTGUG00000000092	-	99	79.713	Taeniopygia_guttata
ENSSDUG00000021142	larsb	100	90.878	ENSTRUG00000005358	larsb	100	90.878	Takifugu_rubripes
ENSSDUG00000021142	larsb	99	87.637	ENSTNIG00000018214	larsb	100	87.721	Tetraodon_nigroviridis
ENSSDUG00000021142	larsb	91	75.099	ENSTBEG00000003757	LARS	94	75.099	Tupaia_belangeri
ENSSDUG00000021142	larsb	96	75.898	ENSTTRG00000016712	LARS	96	75.898	Tursiops_truncatus
ENSSDUG00000021142	larsb	94	79.839	ENSUAMG00000019907	LARS	99	79.839	Ursus_americanus
ENSSDUG00000021142	larsb	100	78.885	ENSUMAG00000010585	LARS	100	78.885	Ursus_maritimus
ENSSDUG00000021142	larsb	92	78.020	ENSVPAG00000000557	LARS	92	78.020	Vicugna_pacos
ENSSDUG00000021142	larsb	100	79.307	ENSVVUG00000021124	LARS	100	79.307	Vulpes_vulpes
ENSSDUG00000021142	larsb	99	80.506	ENSXETG00000002320	lars	99	80.422	Xenopus_tropicalis
ENSSDUG00000021142	larsb	100	92.821	ENSXMAG00000001454	larsb	100	92.821	Xiphophorus_maculatus