EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000021181 (Gene tree)
Gene ID: 111238689
Gene Symbol: ercc3
Alias: wu:fc25f08|xpb
Full Name: ERCC excision repair 3%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7882 bases
Position: chrBDQW01001449.1:1595141-1603022
Accession: 111238689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000029414	ResIII	PF04851.15	2.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000029910	-	4292	XM_022768326	ENSSDUP00000029414	783 (aa)	XP_022624047	UPI000BBEEC71

Gene Model

Click here to download ENSSDUG00000021181's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03022	Basal transcription factors	KEGG
sdu03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000021181's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000021181	ercc3	100	87.294	ENSG00000163161	ERCC3	99	96.273	Homo_sapiens
ENSSDUG00000021181	ercc3	100	96.807	ENSAPOG00000014383	ercc3	100	96.807	Acanthochromis_polyacanthus
ENSSDUG00000021181	ercc3	100	86.641	ENSAMEG00000016840	ERCC3	100	87.277	Ailuropoda_melanoleuca
ENSSDUG00000021181	ercc3	99	95.484	ENSACIG00000000126	ercc3	100	95.484	Amphilophus_citrinellus
ENSSDUG00000021181	ercc3	100	96.807	ENSAOCG00000009396	ercc3	100	96.807	Amphiprion_ocellaris
ENSSDUG00000021181	ercc3	100	96.679	ENSAPEG00000023077	ercc3	100	96.679	Amphiprion_percula
ENSSDUG00000021181	ercc3	100	96.552	ENSATEG00000014860	ercc3	100	96.552	Anabas_testudineus
ENSSDUG00000021181	ercc3	91	87.904	ENSAPLG00000012068	ERCC3	98	87.904	Anas_platyrhynchos
ENSSDUG00000021181	ercc3	92	88.781	ENSACAG00000009919	ERCC3	100	88.781	Anolis_carolinensis
ENSSDUG00000021181	ercc3	100	87.166	ENSANAG00000031091	ERCC3	100	87.166	Aotus_nancymaae
ENSSDUG00000021181	ercc3	100	96.169	ENSACLG00000022508	ercc3	100	96.169	Astatotilapia_calliptera
ENSSDUG00000021181	ercc3	100	92.593	ENSAMXG00000036947	ercc3	100	92.593	Astyanax_mexicanus
ENSSDUG00000021181	ercc3	100	86.785	ENSBTAG00000020777	ERCC3	100	86.785	Bos_taurus
ENSSDUG00000021181	ercc3	99	62.453	WBGene00013441	xpb-1	96	63.589	Caenorhabditis_elegans
ENSSDUG00000021181	ercc3	100	87.294	ENSCJAG00000010416	ERCC3	100	87.294	Callithrix_jacchus
ENSSDUG00000021181	ercc3	97	88.142	ENSCAFG00000004497	ERCC3	100	86.879	Canis_familiaris
ENSSDUG00000021181	ercc3	97	88.142	ENSCAFG00020003495	ERCC3	100	86.879	Canis_lupus_dingo
ENSSDUG00000021181	ercc3	100	86.912	ENSCHIG00000014551	ERCC3	100	86.912	Capra_hircus
ENSSDUG00000021181	ercc3	99	86.615	ENSTSYG00000004137	ERCC3	97	88.415	Carlito_syrichta
ENSSDUG00000021181	ercc3	78	80.293	ENSCAPG00000017027	ERCC3	93	80.293	Cavia_aperea
ENSSDUG00000021181	ercc3	100	85.751	ENSCPOG00000002144	ERCC3	100	86.387	Cavia_porcellus
ENSSDUG00000021181	ercc3	100	87.294	ENSCCAG00000024421	ERCC3	100	87.294	Cebus_capucinus
ENSSDUG00000021181	ercc3	100	87.294	ENSCATG00000032313	ERCC3	100	87.294	Cercocebus_atys
ENSSDUG00000021181	ercc3	100	86.260	ENSCLAG00000002965	ERCC3	96	86.896	Chinchilla_lanigera
ENSSDUG00000021181	ercc3	100	87.166	ENSCSAG00000016827	ERCC3	100	87.166	Chlorocebus_sabaeus
ENSSDUG00000021181	ercc3	83	93.567	ENSCHOG00000007414	ERCC3	83	93.567	Choloepus_hoffmanni
ENSSDUG00000021181	ercc3	92	89.058	ENSCPBG00000013638	ERCC3	100	89.058	Chrysemys_picta_bellii
ENSSDUG00000021181	ercc3	96	71.447	ENSCING00000002867	ercc3	99	70.138	Ciona_intestinalis
ENSSDUG00000021181	ercc3	100	87.532	ENSCANG00000007094	ERCC3	100	87.532	Colobus_angolensis_palliatus
ENSSDUG00000021181	ercc3	100	87.023	ENSCGRG00001009426	Ercc3	100	87.405	Cricetulus_griseus_chok1gshd
ENSSDUG00000021181	ercc3	97	86.614	ENSCGRG00000015547	Ercc3	100	87.008	Cricetulus_griseus_crigri
ENSSDUG00000021181	ercc3	100	92.739	ENSCSEG00000016479	ercc3	100	92.739	Cynoglossus_semilaevis
ENSSDUG00000021181	ercc3	100	94.253	ENSCVAG00000015177	ercc3	100	94.253	Cyprinodon_variegatus
ENSSDUG00000021181	ercc3	98	92.960	ENSDARG00000002402	ercc3	100	92.337	Danio_rerio
ENSSDUG00000021181	ercc3	56	92.308	ENSDNOG00000035027	ERCC3	95	92.308	Dasypus_novemcinctus
ENSSDUG00000021181	ercc3	96	88.889	ENSDORG00000004671	Ercc3	100	87.245	Dipodomys_ordii
ENSSDUG00000021181	ercc3	99	67.459	FBgn0001179	hay	98	67.636	Drosophila_melanogaster
ENSSDUG00000021181	ercc3	90	89.189	ENSETEG00000019887	ERCC3	90	89.189	Echinops_telfairi
ENSSDUG00000021181	ercc3	99	80.177	ENSEBUG00000009773	ercc3	100	79.874	Eptatretus_burgeri
ENSSDUG00000021181	ercc3	100	84.198	ENSEASG00005022466	ERCC3	100	84.139	Equus_asinus_asinus
ENSSDUG00000021181	ercc3	100	86.912	ENSECAG00000006589	ERCC3	100	86.785	Equus_caballus
ENSSDUG00000021181	ercc3	90	88.592	ENSEEUG00000001057	ERCC3	96	88.685	Erinaceus_europaeus
ENSSDUG00000021181	ercc3	100	91.083	ENSELUG00000000089	ercc3	99	91.083	Esox_lucius
ENSSDUG00000021181	ercc3	100	86.531	ENSFCAG00000006989	ERCC3	100	86.912	Felis_catus
ENSSDUG00000021181	ercc3	99	85.972	ENSFALG00000003936	ERCC3	96	87.384	Ficedula_albicollis
ENSSDUG00000021181	ercc3	100	86.277	ENSFDAG00000011924	ERCC3	100	86.404	Fukomys_damarensis
ENSSDUG00000021181	ercc3	100	93.870	ENSFHEG00000005185	ercc3	100	93.870	Fundulus_heteroclitus
ENSSDUG00000021181	ercc3	100	90.549	ENSGMOG00000018032	ercc3	99	90.549	Gadus_morhua
ENSSDUG00000021181	ercc3	96	87.169	ENSGALG00000011515	ERCC3	100	85.204	Gallus_gallus
ENSSDUG00000021181	ercc3	100	94.508	ENSGAFG00000011936	ercc3	100	94.508	Gambusia_affinis
ENSSDUG00000021181	ercc3	100	94.522	ENSGACG00000015218	ercc3	100	94.522	Gasterosteus_aculeatus
ENSSDUG00000021181	ercc3	92	89.197	ENSGAGG00000018579	ERCC3	100	89.197	Gopherus_agassizii
ENSSDUG00000021181	ercc3	100	87.294	ENSGGOG00000015255	ERCC3	100	87.294	Gorilla_gorilla
ENSSDUG00000021181	ercc3	100	96.169	ENSHBUG00000003818	ercc3	100	96.169	Haplochromis_burtoni
ENSSDUG00000021181	ercc3	100	86.641	ENSHGLG00000011014	ERCC3	100	87.023	Heterocephalus_glaber_female
ENSSDUG00000021181	ercc3	100	86.641	ENSHGLG00100013806	ERCC3	100	87.023	Heterocephalus_glaber_male
ENSSDUG00000021181	ercc3	100	93.103	ENSHCOG00000016924	ercc3	100	93.103	Hippocampus_comes
ENSSDUG00000021181	ercc3	100	91.327	ENSIPUG00000021000	ercc3	100	91.327	Ictalurus_punctatus
ENSSDUG00000021181	ercc3	100	86.404	ENSSTOG00000011001	ERCC3	100	86.785	Ictidomys_tridecemlineatus
ENSSDUG00000021181	ercc3	90	87.324	ENSJJAG00000001117	Ercc3	100	87.324	Jaculus_jaculus
ENSSDUG00000021181	ercc3	100	93.997	ENSKMAG00000021764	ercc3	100	93.997	Kryptolebias_marmoratus
ENSSDUG00000021181	ercc3	100	95.658	ENSLBEG00000000468	ercc3	100	95.658	Labrus_bergylta
ENSSDUG00000021181	ercc3	96	84.224	ENSLACG00000014815	ERCC3	100	82.685	Latimeria_chalumnae
ENSSDUG00000021181	ercc3	90	88.277	ENSLOCG00000010907	ercc3	87	88.277	Lepisosteus_oculatus
ENSSDUG00000021181	ercc3	100	86.005	ENSLAFG00000014866	ERCC3	100	86.768	Loxodonta_africana
ENSSDUG00000021181	ercc3	100	87.294	ENSMFAG00000003370	ERCC3	100	87.294	Macaca_fascicularis
ENSSDUG00000021181	ercc3	100	83.563	ENSMNEG00000004215	ERCC3	100	83.563	Macaca_nemestrina
ENSSDUG00000021181	ercc3	100	87.294	ENSMLEG00000042061	ERCC3	100	87.294	Mandrillus_leucophaeus
ENSSDUG00000021181	ercc3	100	94.636	ENSMAMG00000004505	ercc3	99	94.636	Mastacembelus_armatus
ENSSDUG00000021181	ercc3	100	96.169	ENSMZEG00005004854	ercc3	100	96.169	Maylandia_zebra
ENSSDUG00000021181	ercc3	90	88.136	ENSMGAG00000011706	ERCC3	100	88.136	Meleagris_gallopavo
ENSSDUG00000021181	ercc3	100	86.531	ENSMAUG00000004515	Ercc3	100	87.166	Mesocricetus_auratus
ENSSDUG00000021181	ercc3	100	86.768	ENSMICG00000009578	ERCC3	100	87.150	Microcebus_murinus
ENSSDUG00000021181	ercc3	100	86.896	ENSMOCG00000021767	Ercc3	100	87.277	Microtus_ochrogaster
ENSSDUG00000021181	ercc3	99	94.703	ENSMMOG00000018174	ercc3	99	94.703	Mola_mola
ENSSDUG00000021181	ercc3	96	88.624	ENSMODG00000018695	ERCC3	100	87.405	Monodelphis_domestica
ENSSDUG00000021181	ercc3	100	94.508	ENSMALG00000014944	ercc3	100	94.508	Monopterus_albus
ENSSDUG00000021181	ercc3	100	87.405	MGP_CAROLIEiJ_G0022075	Ercc3	100	87.786	Mus_caroli
ENSSDUG00000021181	ercc3	100	87.023	ENSMUSG00000024382	Ercc3	100	87.405	Mus_musculus
ENSSDUG00000021181	ercc3	100	87.150	MGP_PahariEiJ_G0018809	Ercc3	100	87.532	Mus_pahari
ENSSDUG00000021181	ercc3	100	86.768	MGP_SPRETEiJ_G0022987	Ercc3	100	87.150	Mus_spretus
ENSSDUG00000021181	ercc3	100	86.768	ENSMPUG00000012021	ERCC3	100	87.150	Mustela_putorius_furo
ENSSDUG00000021181	ercc3	93	84.658	ENSMLUG00000007429	ERCC3	99	84.658	Myotis_lucifugus
ENSSDUG00000021181	ercc3	97	85.995	ENSNGAG00000019598	Ercc3	99	88.602	Nannospalax_galili
ENSSDUG00000021181	ercc3	100	96.169	ENSNBRG00000019074	ercc3	100	96.169	Neolamprologus_brichardi
ENSSDUG00000021181	ercc3	92	86.565	ENSNLEG00000015665	ERCC3	97	86.565	Nomascus_leucogenys
ENSSDUG00000021181	ercc3	100	84.879	ENSOPRG00000004553	ERCC3	100	85.006	Ochotona_princeps
ENSSDUG00000021181	ercc3	100	86.531	ENSODEG00000005795	ERCC3	100	87.166	Octodon_degus
ENSSDUG00000021181	ercc3	100	96.552	ENSONIG00000003255	ercc3	100	96.552	Oreochromis_niloticus
ENSSDUG00000021181	ercc3	100	86.404	ENSOCUG00000002248	ERCC3	100	86.785	Oryctolagus_cuniculus
ENSSDUG00000021181	ercc3	100	93.742	ENSORLG00000004393	ercc3	100	93.742	Oryzias_latipes
ENSSDUG00000021181	ercc3	100	93.622	ENSORLG00020017718	ercc3	100	93.622	Oryzias_latipes_hni
ENSSDUG00000021181	ercc3	100	93.870	ENSORLG00015015695	ercc3	100	93.870	Oryzias_latipes_hsok
ENSSDUG00000021181	ercc3	100	94.636	ENSOMEG00000015374	ercc3	100	94.636	Oryzias_melastigma
ENSSDUG00000021181	ercc3	100	86.692	ENSOGAG00000009103	ERCC3	100	87.072	Otolemur_garnettii
ENSSDUG00000021181	ercc3	100	86.785	ENSOARG00000016147	ERCC3	100	86.785	Ovis_aries
ENSSDUG00000021181	ercc3	100	87.294	ENSPPAG00000036166	ERCC3	100	87.294	Pan_paniscus
ENSSDUG00000021181	ercc3	100	86.658	ENSPPRG00000001305	ERCC3	100	87.039	Panthera_pardus
ENSSDUG00000021181	ercc3	92	88.658	ENSPTIG00000016969	ERCC3	100	88.658	Panthera_tigris_altaica
ENSSDUG00000021181	ercc3	100	87.294	ENSPTRG00000046940	ERCC3	100	87.294	Pan_troglodytes
ENSSDUG00000021181	ercc3	100	87.294	ENSPANG00000007699	ERCC3	100	87.294	Papio_anubis
ENSSDUG00000021181	ercc3	100	91.454	ENSPKIG00000001319	ercc3	99	92.553	Paramormyrops_kingsleyae
ENSSDUG00000021181	ercc3	92	88.643	ENSPSIG00000014682	ERCC3	100	88.643	Pelodiscus_sinensis
ENSSDUG00000021181	ercc3	96	93.113	ENSPMGG00000017885	ercc3	99	91.699	Periophthalmus_magnuspinnatus
ENSSDUG00000021181	ercc3	100	87.277	ENSPEMG00000013733	Ercc3	100	87.659	Peromyscus_maniculatus_bairdii
ENSSDUG00000021181	ercc3	90	78.711	ENSPMAG00000005081	ercc3	99	78.711	Petromyzon_marinus
ENSSDUG00000021181	ercc3	100	86.862	ENSPCIG00000011821	ERCC3	100	87.786	Phascolarctos_cinereus
ENSSDUG00000021181	ercc3	98	94.792	ENSPFOG00000015604	ercc3	100	94.253	Poecilia_formosa
ENSSDUG00000021181	ercc3	98	92.078	ENSPLAG00000022245	ercc3	100	95.562	Poecilia_latipinna
ENSSDUG00000021181	ercc3	98	94.792	ENSPMEG00000016987	ercc3	100	94.253	Poecilia_mexicana
ENSSDUG00000021181	ercc3	100	94.253	ENSPREG00000020921	ercc3	100	94.253	Poecilia_reticulata
ENSSDUG00000021181	ercc3	100	86.548	ENSPPYG00000012769	ERCC3	100	86.548	Pongo_abelii
ENSSDUG00000021181	ercc3	100	87.039	ENSPCOG00000024903	ERCC3	100	87.039	Propithecus_coquereli
ENSSDUG00000021181	ercc3	90	87.984	ENSPVAG00000013774	ERCC3	90	87.984	Pteropus_vampyrus
ENSSDUG00000021181	ercc3	100	96.169	ENSPNYG00000001208	ercc3	100	96.169	Pundamilia_nyererei
ENSSDUG00000021181	ercc3	100	91.826	ENSPNAG00000005748	ercc3	100	91.826	Pygocentrus_nattereri
ENSSDUG00000021181	ercc3	100	87.150	ENSRNOG00000013180	Ercc3	100	87.532	Rattus_norvegicus
ENSSDUG00000021181	ercc3	100	87.294	ENSRBIG00000027692	ERCC3	100	87.294	Rhinopithecus_bieti
ENSSDUG00000021181	ercc3	100	87.294	ENSRROG00000040673	ERCC3	100	87.294	Rhinopithecus_roxellana
ENSSDUG00000021181	ercc3	92	55.088	YIL143C	SSL2	85	55.224	Saccharomyces_cerevisiae
ENSSDUG00000021181	ercc3	100	86.912	ENSSBOG00000023079	ERCC3	100	86.912	Saimiri_boliviensis_boliviensis
ENSSDUG00000021181	ercc3	96	88.757	ENSSHAG00000007423	ERCC3	100	87.150	Sarcophilus_harrisii
ENSSDUG00000021181	ercc3	97	91.931	ENSSFOG00015012753	ercc3	100	90.816	Scleropages_formosus
ENSSDUG00000021181	ercc3	100	94.275	ENSSMAG00000011915	ercc3	100	93.885	Scophthalmus_maximus
ENSSDUG00000021181	ercc3	100	99.745	ENSSLDG00000008744	ercc3	98	99.745	Seriola_lalandi_dorsalis
ENSSDUG00000021181	ercc3	55	79.080	ENSSARG00000000751	-	85	78.899	Sorex_araneus
ENSSDUG00000021181	ercc3	90	87.712	ENSSPUG00000015183	ERCC3	91	87.712	Sphenodon_punctatus
ENSSDUG00000021181	ercc3	100	96.552	ENSSPAG00000004748	ercc3	100	96.552	Stegastes_partitus
ENSSDUG00000021181	ercc3	100	86.404	ENSSSCG00000015721	ERCC3	100	88.413	Sus_scrofa
ENSSDUG00000021181	ercc3	99	87.387	ENSTGUG00000004920	-	100	87.387	Taeniopygia_guttata
ENSSDUG00000021181	ercc3	100	92.337	ENSTRUG00000017185	ercc3	100	92.337	Takifugu_rubripes
ENSSDUG00000021181	ercc3	97	90.433	ENSTNIG00000005457	ercc3	98	91.755	Tetraodon_nigroviridis
ENSSDUG00000021181	ercc3	80	88.413	ENSTBEG00000009381	ERCC3	81	88.413	Tupaia_belangeri
ENSSDUG00000021181	ercc3	68	92.830	ENSUAMG00000009589	-	100	92.830	Ursus_americanus
ENSSDUG00000021181	ercc3	100	86.514	ENSUMAG00000008361	ERCC3	100	87.150	Ursus_maritimus
ENSSDUG00000021181	ercc3	92	88.520	ENSVVUG00000010431	ERCC3	100	88.520	Vulpes_vulpes
ENSSDUG00000021181	ercc3	100	87.199	ENSXETG00000033646	ercc3	100	86.946	Xenopus_tropicalis
ENSSDUG00000021181	ercc3	99	94.703	ENSXCOG00000001791	ercc3	99	94.703	Xiphophorus_couchianus
ENSSDUG00000021181	ercc3	100	94.891	ENSXMAG00000003641	ercc3	100	94.891	Xiphophorus_maculatus