EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000021326 (Gene tree)
Gene ID: 111236400
Gene Symbol: pcca
Alias: fb92g02|wu:fb92g02|zgc:100925
Full Name: propionyl-CoA carboxylase subunit alpha
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 26156 bases
Position: chrBDQW01000665.1:70103-96258
Accession: 111236400
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000029631	RimK	PF08443.11	4.5e-05	1	1
ENSSDUP00000029605	RimK	PF08443.11	5.3e-05	1	1
ENSSDUP00000029583	RimK	PF08443.11	5.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000030107	-	2957	-	ENSSDUP00000029605	692 (aa)	-	-
ENSSDUT00000030135	-	2816	-	ENSSDUP00000029631	645 (aa)	-	-
ENSSDUT00000030084	-	2422	XM_022765109	ENSSDUP00000029583	711 (aa)	XP_022620830	UPI000BBE9B44

Gene Model

Click here to download ENSSDUG00000021326's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu00280	Valine, leucine and isoleucine degradation	KEGG
sdu00630	Glyoxylate and dicarboxylate metabolism	KEGG
sdu00640	Propanoate metabolism	KEGG
sdu01100	Metabolic pathways	KEGG
sdu01200	Carbon metabolism	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000021326's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000021326	pcca	99	74.074	ENSG00000175198	PCCA	99	85.127	Homo_sapiens
ENSSDUG00000021326	pcca	91	91.615	ENSAPOG00000002389	pcca	100	91.615	Acanthochromis_polyacanthus
ENSSDUG00000021326	pcca	88	77.215	ENSAMEG00000016627	PCCA	99	77.215	Ailuropoda_melanoleuca
ENSSDUG00000021326	pcca	82	96.078	ENSACIG00000015913	PCCA	99	96.078	Amphilophus_citrinellus
ENSSDUG00000021326	pcca	100	90.999	ENSAOCG00000005451	pcca	100	90.999	Amphiprion_ocellaris
ENSSDUG00000021326	pcca	100	91.139	ENSAPEG00000002955	pcca	100	91.139	Amphiprion_percula
ENSSDUG00000021326	pcca	100	91.842	ENSATEG00000004273	pcca	100	91.842	Anabas_testudineus
ENSSDUG00000021326	pcca	95	79.234	ENSAPLG00000002609	PCCA	98	79.234	Anas_platyrhynchos
ENSSDUG00000021326	pcca	88	76.274	ENSANAG00000031162	PCCA	95	76.274	Aotus_nancymaae
ENSSDUG00000021326	pcca	100	88.608	ENSACLG00000006725	pcca	99	88.608	Astatotilapia_calliptera
ENSSDUG00000021326	pcca	98	75.000	ENSBTAG00000010672	PCCA	96	74.121	Bos_taurus
ENSSDUG00000021326	pcca	99	73.789	ENSCJAG00000020998	PCCA	95	76.198	Callithrix_jacchus
ENSSDUG00000021326	pcca	98	75.036	ENSCAFG00000005838	PCCA	96	75.036	Canis_familiaris
ENSSDUG00000021326	pcca	98	75.036	ENSCAFG00020022683	PCCA	96	75.036	Canis_lupus_dingo
ENSSDUG00000021326	pcca	98	75.429	ENSCHIG00000007335	PCCA	96	75.429	Capra_hircus
ENSSDUG00000021326	pcca	97	75.109	ENSTSYG00000000053	PCCA	95	76.727	Carlito_syrichta
ENSSDUG00000021326	pcca	98	75.501	ENSCPOG00000011274	PCCA	96	75.501	Cavia_porcellus
ENSSDUG00000021326	pcca	99	73.932	ENSCCAG00000022253	PCCA	95	76.347	Cebus_capucinus
ENSSDUG00000021326	pcca	95	76.523	ENSCATG00000034177	PCCA	95	76.647	Cercocebus_atys
ENSSDUG00000021326	pcca	98	75.358	ENSCLAG00000003205	PCCA	96	75.358	Chinchilla_lanigera
ENSSDUG00000021326	pcca	99	74.501	ENSCSAG00000017493	PCCA	96	74.501	Chlorocebus_sabaeus
ENSSDUG00000021326	pcca	86	73.600	ENSCHOG00000000247	PCCA	88	73.600	Choloepus_hoffmanni
ENSSDUG00000021326	pcca	98	77.571	ENSCPBG00000018046	PCCA	98	77.571	Chrysemys_picta_bellii
ENSSDUG00000021326	pcca	94	65.031	ENSCING00000008081	-	95	64.636	Ciona_intestinalis
ENSSDUG00000021326	pcca	94	63.636	ENSCSAVG00000011361	-	99	63.636	Ciona_savignyi
ENSSDUG00000021326	pcca	95	76.523	ENSCANG00000013062	PCCA	95	76.647	Colobus_angolensis_palliatus
ENSSDUG00000021326	pcca	98	75.429	ENSCGRG00001015819	Pcca	97	75.429	Cricetulus_griseus_chok1gshd
ENSSDUG00000021326	pcca	98	75.429	ENSCGRG00000014796	Pcca	97	75.429	Cricetulus_griseus_crigri
ENSSDUG00000021326	pcca	100	88.186	ENSCSEG00000016645	pcca	100	88.186	Cynoglossus_semilaevis
ENSSDUG00000021326	pcca	88	89.583	ENSCVAG00000010430	pcca	100	89.583	Cyprinodon_variegatus
ENSSDUG00000021326	pcca	98	74.069	ENSDNOG00000042384	PCCA	100	75.776	Dasypus_novemcinctus
ENSSDUG00000021326	pcca	99	66.478	ENSDORG00000012949	Pcca	96	66.478	Dipodomys_ordii
ENSSDUG00000021326	pcca	98	80.000	ENSEASG00005022166	PCCA	96	75.571	Equus_asinus_asinus
ENSSDUG00000021326	pcca	98	75.714	ENSECAG00000018952	PCCA	96	75.714	Equus_caballus
ENSSDUG00000021326	pcca	93	84.242	ENSELUG00000002383	pcca	100	84.242	Esox_lucius
ENSSDUG00000021326	pcca	98	75.000	ENSFCAG00000012573	PCCA	95	77.313	Felis_catus
ENSSDUG00000021326	pcca	99	74.322	ENSFDAG00000005817	PCCA	93	74.322	Fukomys_damarensis
ENSSDUG00000021326	pcca	100	87.764	ENSFHEG00000011811	pcca	100	87.764	Fundulus_heteroclitus
ENSSDUG00000021326	pcca	99	87.464	ENSGAFG00000011218	pcca	99	87.464	Gambusia_affinis
ENSSDUG00000021326	pcca	91	92.000	ENSGACG00000002342	pcca	100	92.000	Gasterosteus_aculeatus
ENSSDUG00000021326	pcca	89	78.730	ENSGAGG00000010472	PCCA	95	78.730	Gopherus_agassizii
ENSSDUG00000021326	pcca	99	74.217	ENSGGOG00000012516	PCCA	95	76.497	Gorilla_gorilla
ENSSDUG00000021326	pcca	98	73.639	ENSHGLG00000011057	PCCA	96	73.639	Heterocephalus_glaber_female
ENSSDUG00000021326	pcca	98	73.639	ENSHGLG00100001468	PCCA	96	73.639	Heterocephalus_glaber_male
ENSSDUG00000021326	pcca	100	85.253	ENSHCOG00000016098	pcca	100	87.578	Hippocampus_comes
ENSSDUG00000021326	pcca	96	76.350	ENSSTOG00000021045	PCCA	99	76.350	Ictidomys_tridecemlineatus
ENSSDUG00000021326	pcca	98	75.000	ENSJJAG00000011150	Pcca	97	75.000	Jaculus_jaculus
ENSSDUG00000021326	pcca	98	89.511	ENSKMAG00000014632	pcca	99	88.592	Kryptolebias_marmoratus
ENSSDUG00000021326	pcca	91	80.435	ENSLACG00000012828	PCCA	100	80.435	Latimeria_chalumnae
ENSSDUG00000021326	pcca	94	77.545	ENSLAFG00000014958	PCCA	100	77.545	Loxodonta_africana
ENSSDUG00000021326	pcca	95	76.523	ENSMFAG00000020427	PCCA	95	76.647	Macaca_fascicularis
ENSSDUG00000021326	pcca	95	76.374	ENSMMUG00000004493	PCCA	95	76.497	Macaca_mulatta
ENSSDUG00000021326	pcca	95	76.523	ENSMNEG00000045261	PCCA	95	76.647	Macaca_nemestrina
ENSSDUG00000021326	pcca	95	76.523	ENSMLEG00000033842	PCCA	95	76.647	Mandrillus_leucophaeus
ENSSDUG00000021326	pcca	100	89.030	ENSMAMG00000009304	pcca	100	89.030	Mastacembelus_armatus
ENSSDUG00000021326	pcca	100	88.608	ENSMZEG00005018487	pcca	99	88.608	Maylandia_zebra
ENSSDUG00000021326	pcca	65	84.634	ENSMGAG00000014892	PCCA	100	84.634	Meleagris_gallopavo
ENSSDUG00000021326	pcca	89	76.825	ENSMAUG00000000626	Pcca	93	76.825	Mesocricetus_auratus
ENSSDUG00000021326	pcca	98	75.215	ENSMICG00000010685	-	95	77.395	Microcebus_murinus
ENSSDUG00000021326	pcca	75	76.446	ENSMICG00000038258	-	90	76.446	Microcebus_murinus
ENSSDUG00000021326	pcca	98	75.429	ENSMOCG00000015156	Pcca	97	75.429	Microtus_ochrogaster
ENSSDUG00000021326	pcca	100	89.170	ENSMALG00000009947	pcca	100	89.170	Monopterus_albus
ENSSDUG00000021326	pcca	99	75.989	MGP_CAROLIEiJ_G0019618	Pcca	98	75.989	Mus_caroli
ENSSDUG00000021326	pcca	99	75.989	ENSMUSG00000041650	Pcca	98	75.989	Mus_musculus
ENSSDUG00000021326	pcca	99	76.387	MGP_PahariEiJ_G0030634	Pcca	97	76.387	Mus_pahari
ENSSDUG00000021326	pcca	99	75.847	MGP_SPRETEiJ_G0020515	Pcca	98	75.847	Mus_spretus
ENSSDUG00000021326	pcca	95	77.481	ENSMPUG00000011333	PCCA	99	77.481	Mustela_putorius_furo
ENSSDUG00000021326	pcca	86	75.540	ENSMLUG00000005729	PCCA	95	75.540	Myotis_lucifugus
ENSSDUG00000021326	pcca	99	69.744	ENSNGAG00000016528	Pcca	97	70.028	Nannospalax_galili
ENSSDUG00000021326	pcca	69	90.385	ENSNBRG00000019075	pcca	87	90.385	Neolamprologus_brichardi
ENSSDUG00000021326	pcca	98	74.928	ENSODEG00000010667	PCCA	93	74.928	Octodon_degus
ENSSDUG00000021326	pcca	100	89.311	ENSONIG00000013151	pcca	99	89.311	Oreochromis_niloticus
ENSSDUG00000021326	pcca	89	76.776	ENSOCUG00000017230	PCCA	88	75.833	Oryctolagus_cuniculus
ENSSDUG00000021326	pcca	100	85.854	ENSORLG00000000361	pcca	100	85.854	Oryzias_latipes
ENSSDUG00000021326	pcca	100	86.134	ENSORLG00020005749	pcca	100	86.134	Oryzias_latipes_hni
ENSSDUG00000021326	pcca	100	85.754	ENSORLG00015012738	pcca	100	85.754	Oryzias_latipes_hsok
ENSSDUG00000021326	pcca	100	86.255	ENSOMEG00000001912	pcca	100	86.255	Oryzias_melastigma
ENSSDUG00000021326	pcca	97	76.556	ENSOGAG00000017088	PCCA	95	76.556	Otolemur_garnettii
ENSSDUG00000021326	pcca	91	76.780	ENSOARG00000004442	PCCA	100	76.780	Ovis_aries
ENSSDUG00000021326	pcca	99	74.074	ENSPPAG00000036841	PCCA	95	76.347	Pan_paniscus
ENSSDUG00000021326	pcca	98	75.000	ENSPPRG00000006626	PCCA	95	77.313	Panthera_pardus
ENSSDUG00000021326	pcca	88	76.667	ENSPTIG00000009732	PCCA	100	76.667	Panthera_tigris_altaica
ENSSDUG00000021326	pcca	99	74.074	ENSPTRG00000006001	PCCA	95	76.347	Pan_troglodytes
ENSSDUG00000021326	pcca	100	81.997	ENSPKIG00000004765	pcca	100	81.997	Paramormyrops_kingsleyae
ENSSDUG00000021326	pcca	91	80.124	ENSPSIG00000009154	PCCA	100	80.124	Pelodiscus_sinensis
ENSSDUG00000021326	pcca	98	75.286	ENSPEMG00000009083	Pcca	97	75.286	Peromyscus_maniculatus_bairdii
ENSSDUG00000021326	pcca	98	72.785	ENSPCIG00000027261	PCCA	96	72.206	Phascolarctos_cinereus
ENSSDUG00000021326	pcca	100	86.920	ENSPFOG00000014855	pcca	100	86.920	Poecilia_formosa
ENSSDUG00000021326	pcca	100	86.920	ENSPLAG00000016583	pcca	100	86.920	Poecilia_latipinna
ENSSDUG00000021326	pcca	100	86.779	ENSPMEG00000011613	pcca	100	86.779	Poecilia_mexicana
ENSSDUG00000021326	pcca	92	88.737	ENSPREG00000007537	pcca	100	88.737	Poecilia_reticulata
ENSSDUG00000021326	pcca	99	73.932	ENSPPYG00000005473	PCCA	96	73.932	Pongo_abelii
ENSSDUG00000021326	pcca	94	77.096	ENSPCOG00000015321	PCCA	95	77.096	Propithecus_coquereli
ENSSDUG00000021326	pcca	93	88.369	ENSPNYG00000008226	pcca	100	88.369	Pundamilia_nyererei
ENSSDUG00000021326	pcca	100	84.810	ENSPNAG00000011078	pcca	100	84.810	Pygocentrus_nattereri
ENSSDUG00000021326	pcca	95	76.523	ENSRROG00000030936	PCCA	95	76.647	Rhinopithecus_roxellana
ENSSDUG00000021326	pcca	95	76.523	ENSSBOG00000020005	PCCA	95	76.647	Saimiri_boliviensis_boliviensis
ENSSDUG00000021326	pcca	54	87.393	ENSSHAG00000014732	-	100	87.393	Sarcophilus_harrisii
ENSSDUG00000021326	pcca	100	83.404	ENSSFOG00015021986	pcca	100	83.404	Scleropages_formosus
ENSSDUG00000021326	pcca	91	93.944	ENSSMAG00000018126	pcca	100	93.944	Scophthalmus_maximus
ENSSDUG00000021326	pcca	100	99.437	ENSSLDG00000016568	pcca	100	99.437	Seriola_lalandi_dorsalis
ENSSDUG00000021326	pcca	88	76.115	ENSSPUG00000006036	PCCA	97	75.911	Sphenodon_punctatus
ENSSDUG00000021326	pcca	99	88.123	ENSSPAG00000022191	pcca	93	88.123	Stegastes_partitus
ENSSDUG00000021326	pcca	95	77.481	ENSSSCG00000009522	PCCA	92	77.481	Sus_scrofa
ENSSDUG00000021326	pcca	97	75.617	ENSTGUG00000010915	PCCA	99	75.617	Taeniopygia_guttata
ENSSDUG00000021326	pcca	100	90.014	ENSTRUG00000004990	pcca	100	90.014	Takifugu_rubripes
ENSSDUG00000021326	pcca	94	77.612	ENSTTRG00000002569	PCCA	92	77.612	Tursiops_truncatus
ENSSDUG00000021326	pcca	99	73.191	ENSUMAG00000023453	PCCA	100	76.816	Ursus_maritimus
ENSSDUG00000021326	pcca	98	75.036	ENSVVUG00000013550	PCCA	99	77.071	Vulpes_vulpes
ENSSDUG00000021326	pcca	92	88.737	ENSXCOG00000014159	pcca	100	88.737	Xiphophorus_couchianus
ENSSDUG00000021326	pcca	100	86.639	ENSXMAG00000014869	pcca	100	86.639	Xiphophorus_maculatus