EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000021349 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5132 bases
Position: chrBDQW01001504.1:19865-24996
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000029608	MMR_HSR1	PF01926.23	4.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000030110	-	699	-	ENSSDUP00000029608	232 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000021349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000021349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000021349	-	87	41.872	ENSSDUG00000000316	-	83	41.872
ENSSDUG00000021349	-	81	43.158	ENSSDUG00000000370	-	74	43.158
ENSSDUG00000021349	-	81	43.684	ENSSDUG00000005919	-	65	43.684

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000021349	-	91	66.351	ENSAPOG00000006213	-	72	66.351	Acanthochromis_polyacanthus
ENSSDUG00000021349	-	84	63.776	ENSACIG00000014950	-	83	63.776	Amphilophus_citrinellus
ENSSDUG00000021349	-	94	69.820	ENSACIG00000023712	-	56	69.820	Amphilophus_citrinellus
ENSSDUG00000021349	-	90	42.180	ENSATEG00000008595	-	75	42.180	Anabas_testudineus
ENSSDUG00000021349	-	94	70.136	ENSACLG00000015361	-	55	70.136	Astatotilapia_calliptera
ENSSDUG00000021349	-	88	56.158	ENSAMXG00000030535	-	53	55.102	Astyanax_mexicanus
ENSSDUG00000021349	-	88	67.805	ENSCVAG00000022676	-	61	67.805	Cyprinodon_variegatus
ENSSDUG00000021349	-	86	71.000	ENSCVAG00000014791	-	54	71.000	Cyprinodon_variegatus
ENSSDUG00000021349	-	91	67.757	ENSCVAG00000022669	-	76	67.757	Cyprinodon_variegatus
ENSSDUG00000021349	-	98	63.580	ENSCVAG00000007794	-	51	63.580	Cyprinodon_variegatus
ENSSDUG00000021349	-	92	54.419	ENSDARG00000039888	CR855393.1	59	54.419	Danio_rerio
ENSSDUG00000021349	-	91	51.415	ENSDARG00000076398	si:dkey-201l21.4	52	51.415	Danio_rerio
ENSSDUG00000021349	-	90	58.852	ENSFHEG00000002160	-	66	58.852	Fundulus_heteroclitus
ENSSDUG00000021349	-	58	44.118	ENSGMOG00000019744	-	77	44.118	Gadus_morhua
ENSSDUG00000021349	-	75	41.954	ENSGMOG00000019786	-	84	41.954	Gadus_morhua
ENSSDUG00000021349	-	81	42.021	ENSGMOG00000008232	-	56	42.408	Gadus_morhua
ENSSDUG00000021349	-	65	39.735	ENSGMOG00000020208	-	82	39.735	Gadus_morhua
ENSSDUG00000021349	-	71	44.242	ENSGMOG00000020059	-	80	44.242	Gadus_morhua
ENSSDUG00000021349	-	87	41.089	ENSGAFG00000018470	-	77	41.089	Gambusia_affinis
ENSSDUG00000021349	-	90	60.287	ENSGAFG00000005050	-	80	60.287	Gambusia_affinis
ENSSDUG00000021349	-	91	66.981	ENSGACG00000005035	-	53	66.981	Gasterosteus_aculeatus
ENSSDUG00000021349	-	91	69.340	ENSGACG00000015437	-	54	69.340	Gasterosteus_aculeatus
ENSSDUG00000021349	-	66	46.452	ENSGACG00000015787	-	71	46.452	Gasterosteus_aculeatus
ENSSDUG00000021349	-	87	69.951	ENSHBUG00000007413	-	81	69.951	Haplochromis_burtoni
ENSSDUG00000021349	-	93	67.742	ENSHBUG00000023729	-	57	67.742	Haplochromis_burtoni
ENSSDUG00000021349	-	86	45.729	ENSIPUG00000000082	-	84	45.729	Ictalurus_punctatus
ENSSDUG00000021349	-	87	53.398	ENSIPUG00000009201	-	80	53.398	Ictalurus_punctatus
ENSSDUG00000021349	-	93	45.622	ENSLBEG00000012781	-	82	45.622	Labrus_bergylta
ENSSDUG00000021349	-	83	45.361	ENSLBEG00000028432	-	73	45.361	Labrus_bergylta
ENSSDUG00000021349	-	85	59.596	ENSLBEG00000019795	-	82	59.596	Labrus_bergylta
ENSSDUG00000021349	-	80	43.316	ENSLOCG00000017620	-	54	43.316	Lepisosteus_oculatus
ENSSDUG00000021349	-	80	44.385	ENSMAMG00000015204	-	74	44.385	Mastacembelus_armatus
ENSSDUG00000021349	-	94	70.909	ENSMZEG00005004397	-	76	70.909	Maylandia_zebra
ENSSDUG00000021349	-	93	67.742	ENSMZEG00005023309	-	57	67.742	Maylandia_zebra
ENSSDUG00000021349	-	93	71.296	ENSMZEG00005023315	-	55	71.296	Maylandia_zebra
ENSSDUG00000021349	-	88	66.995	ENSMMOG00000011295	-	73	66.995	Mola_mola
ENSSDUG00000021349	-	85	68.137	ENSMMOG00000015162	-	78	68.137	Mola_mola
ENSSDUG00000021349	-	88	70.531	ENSNBRG00000006565	-	66	70.531	Neolamprologus_brichardi
ENSSDUG00000021349	-	94	61.364	ENSONIG00000013895	-	79	63.682	Oreochromis_niloticus
ENSSDUG00000021349	-	94	67.123	ENSONIG00000017927	-	65	67.123	Oreochromis_niloticus
ENSSDUG00000021349	-	94	60.092	ENSPMGG00000016798	-	53	60.092	Periophthalmus_magnuspinnatus
ENSSDUG00000021349	-	95	56.561	ENSPMGG00000002690	-	60	56.561	Periophthalmus_magnuspinnatus
ENSSDUG00000021349	-	82	46.939	ENSPMGG00000008676	-	54	46.939	Periophthalmus_magnuspinnatus
ENSSDUG00000021349	-	87	69.608	ENSPLAG00000019926	-	73	69.608	Poecilia_latipinna
ENSSDUG00000021349	-	98	56.769	ENSPMEG00000002994	-	50	56.769	Poecilia_mexicana
ENSSDUG00000021349	-	91	65.217	ENSPREG00000007255	-	52	65.217	Poecilia_reticulata
ENSSDUG00000021349	-	86	43.500	ENSPNYG00000016575	-	67	43.500	Pundamilia_nyererei
ENSSDUG00000021349	-	93	37.674	ENSPNAG00000011130	-	70	37.674	Pygocentrus_nattereri
ENSSDUG00000021349	-	88	84.390	ENSSLDG00000018054	-	84	84.390	Seriola_lalandi_dorsalis
ENSSDUG00000021349	-	84	45.128	ENSSLDG00000017661	-	84	45.128	Seriola_lalandi_dorsalis
ENSSDUG00000021349	-	87	66.995	ENSSPAG00000015996	-	76	66.995	Stegastes_partitus
ENSSDUG00000021349	-	86	43.284	ENSSPAG00000003300	-	78	43.284	Stegastes_partitus
ENSSDUG00000021349	-	87	61.386	ENSTRUG00000017314	-	85	61.386	Takifugu_rubripes
ENSSDUG00000021349	-	87	61.386	ENSTRUG00000021059	-	75	61.386	Takifugu_rubripes
ENSSDUG00000021349	-	94	66.514	ENSTRUG00000001460	-	67	66.514	Takifugu_rubripes
ENSSDUG00000021349	-	98	59.031	ENSTNIG00000003332	-	58	59.031	Tetraodon_nigroviridis
ENSSDUG00000021349	-	93	61.860	ENSTNIG00000005878	-	57	61.860	Tetraodon_nigroviridis
ENSSDUG00000021349	-	94	63.134	ENSTNIG00000006523	-	55	63.134	Tetraodon_nigroviridis
ENSSDUG00000021349	-	87	70.149	ENSXCOG00000001022	-	54	67.873	Xiphophorus_couchianus