EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000021434 (Gene tree)
Gene ID
111217609
Gene Symbol
-
Alias
-
Full Name
splicing factor U2AF 65 kDa subunit-like
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Plus strand
Length
11692 bases
Position
chrBDQW01000044.1:2616497-2628188
Accession
111217609
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000029718RRM_1PF00076.221.1e-2913
ENSSDUP00000029718RRM_1PF00076.221.1e-2923
ENSSDUP00000029718RRM_1PF00076.221.1e-2933
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000030230-1473XM_022739561ENSSDUP00000029718490 (aa)XP_022595282-
Gene Model
Click here to download ENSSDUG00000021434's gene model file
Pathways
Pathway IDPathway NameSource
sdu03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000021434's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000021434-6436.782ENSSDUG00000007048-5536.782
ENSSDUG00000021434-6138.235ENSSDUG00000009935puf60b5738.235
ENSSDUG00000021434-8279.012ENSSDUG00000009457u2af2a9673.707
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000021434-8478.313ENSG00000063244U2AF29980.757Homo_sapiens
ENSSDUG00000021434-6475.375ENSAPOG00000023155u2af2a9975.375Acanthochromis_polyacanthus
ENSSDUG00000021434-9496.963ENSAPOG00000002208-9796.963Acanthochromis_polyacanthus
ENSSDUG00000021434-7677.212ENSAMEG00000003864U2AF210073.522Ailuropoda_melanoleuca
ENSSDUG00000021434-7980.051ENSACIG00000005749u2af2a9278.624Amphilophus_citrinellus
ENSSDUG00000021434-9596.567ENSACIG00000014173-10096.567Amphilophus_citrinellus
ENSSDUG00000021434-9497.397ENSAOCG00000003595-9797.397Amphiprion_ocellaris
ENSSDUG00000021434-8279.259ENSAOCG00000015571u2af2a9673.922Amphiprion_ocellaris
ENSSDUG00000021434-9793.882ENSAPEG00000020062-9893.882Amphiprion_percula
ENSSDUG00000021434-7980.307ENSAPEG00000009376u2af2a9378.870Amphiprion_percula
ENSSDUG00000021434-8676.887ENSATEG00000022332u2af2a9673.707Anabas_testudineus
ENSSDUG00000021434-9596.567ENSATEG00000020577-10096.567Anabas_testudineus
ENSSDUG00000021434-8279.412ENSACAG00000015489U2AF29674.304Anolis_carolinensis
ENSSDUG00000021434-7483.636ENSANAG00000028042U2AF29672.626Aotus_nancymaae
ENSSDUG00000021434-9497.180ENSACLG00000020793-9797.180Astatotilapia_calliptera
ENSSDUG00000021434-8279.012ENSACLG00000022181u2af2a9278.624Astatotilapia_calliptera
ENSSDUG00000021434-8278.079ENSAMXG00000039454u2af2b9869.917Astyanax_mexicanus
ENSSDUG00000021434-7977.750ENSAMXG00000033347u2af2a9670.253Astyanax_mexicanus
ENSSDUG00000021434-8478.043ENSBTAG00000002830U2AF29674.627Bos_taurus
ENSSDUG00000021434-8255.721WBGene00006697uaf-110054.795Caenorhabditis_elegans
ENSSDUG00000021434-8477.804ENSCJAG00000017128U2AF29773.718Callithrix_jacchus
ENSSDUG00000021434-8478.313ENSCAFG00000002551U2AF29674.839Canis_familiaris
ENSSDUG00000021434-8279.462ENSCAFG00020015445U2AF29773.362Canis_lupus_dingo
ENSSDUG00000021434-8266.990ENSCHIG00000023595U2AF28766.990Capra_hircus
ENSSDUG00000021434-8477.804ENSTSYG00000007432U2AF29973.932Carlito_syrichta
ENSSDUG00000021434-8478.043ENSCAPG00000008466U2AF29974.573Cavia_aperea
ENSSDUG00000021434-8478.043ENSCPOG00000001582U2AF29674.627Cavia_porcellus
ENSSDUG00000021434-8477.804ENSCCAG00000023336U2AF29674.414Cebus_capucinus
ENSSDUG00000021434-8478.313ENSCATG00000004637U2AF29674.839Cercocebus_atys
ENSSDUG00000021434-8478.313ENSCLAG00000000596U2AF29674.839Chinchilla_lanigera
ENSSDUG00000021434-8478.313ENSCSAG00000001722U2AF29674.839Chlorocebus_sabaeus
ENSSDUG00000021434-8577.230ENSCPBG00000004485U2AF29980.757Chrysemys_picta_bellii
ENSSDUG00000021434-8169.173ENSCING00000003455-8763.871Ciona_intestinalis
ENSSDUG00000021434-8167.082ENSCSAVG00000006813-9560.888Ciona_savignyi
ENSSDUG00000021434-8669.954ENSCANG00000043845-9670.878Colobus_angolensis_palliatus
ENSSDUG00000021434-7678.016ENSCANG00000031002-9374.232Colobus_angolensis_palliatus
ENSSDUG00000021434-8474.217ENSCGRG00001007486-9570.306Cricetulus_griseus_chok1gshd
ENSSDUG00000021434-8477.804ENSCGRG00001003185-9674.414Cricetulus_griseus_chok1gshd
ENSSDUG00000021434-5176.984ENSCGRG00000004524-8274.621Cricetulus_griseus_crigri
ENSSDUG00000021434-8474.217ENSCGRG00000018587-9570.306Cricetulus_griseus_crigri
ENSSDUG00000021434-9489.588ENSCSEG00000020504-9189.805Cynoglossus_semilaevis
ENSSDUG00000021434-7175.000ENSCSEG00000018709u2af2a9875.000Cynoglossus_semilaevis
ENSSDUG00000021434-8378.922ENSCVAG00000001259u2af2a9673.922Cyprinodon_variegatus
ENSSDUG00000021434-9495.445ENSCVAG00000023307-9795.445Cyprinodon_variegatus
ENSSDUG00000021434-8576.056ENSDARG00000011740u2af2b9870.000Danio_rerio
ENSSDUG00000021434-7979.082ENSDARG00000012505u2af2a9670.789Danio_rerio
ENSSDUG00000021434-7678.016ENSDNOG00000047039U2AF29274.232Dasypus_novemcinctus
ENSSDUG00000021434-8477.804ENSDORG00000003250U2af29674.414Dipodomys_ordii
ENSSDUG00000021434-8170.677FBgn0005411U2af5010070.712Drosophila_melanogaster
ENSSDUG00000021434-8052.657FBgn0034834LS28752.657Drosophila_melanogaster
ENSSDUG00000021434-8769.860ENSEBUG00000010917U2AF29667.024Eptatretus_burgeri
ENSSDUG00000021434-8561.667ENSEBUG00000001732U2AF29658.280Eptatretus_burgeri
ENSSDUG00000021434-8279.607ENSEASG00005020708U2AF29074.145Equus_asinus_asinus
ENSSDUG00000021434-8180.402ENSECAG00000010110U2AF29674.138Equus_caballus
ENSSDUG00000021434-8675.058ENSELUG00000015850u2af2a9672.246Esox_lucius
ENSSDUG00000021434-9490.672ENSELUG00000018459-9790.672Esox_lucius
ENSSDUG00000021434-8673.660ENSELUG00000022291u2af2b9568.399Esox_lucius
ENSSDUG00000021434-8477.804ENSFCAG00000011504U2AF29674.414Felis_catus
ENSSDUG00000021434-8478.043ENSFDAG00000011264U2AF29674.573Fukomys_damarensis
ENSSDUG00000021434-8477.143ENSFHEG00000016025u2af2a9673.491Fundulus_heteroclitus
ENSSDUG00000021434-7980.102ENSGMOG00000004535u2af2a9672.222Gadus_morhua
ENSSDUG00000021434-8179.597ENSGALG00000052748U2AF26374.342Gallus_gallus
ENSSDUG00000021434-8378.922ENSGAFG00000013626u2af2a8573.922Gambusia_affinis
ENSSDUG00000021434-9491.757ENSGAFG00000005628-9791.106Gambusia_affinis
ENSSDUG00000021434-9384.348ENSGACG00000014500-9785.408Gasterosteus_aculeatus
ENSSDUG00000021434-7980.307ENSGACG00000010632U2AF29673.118Gasterosteus_aculeatus
ENSSDUG00000021434-6480.757ENSGAGG00000011849U2AF29980.757Gopherus_agassizii
ENSSDUG00000021434-5471.161ENSGGOG00000036399-9671.161Gorilla_gorilla
ENSSDUG00000021434-9497.180ENSHBUG00000017424-9797.180Haplochromis_burtoni
ENSSDUG00000021434-8279.012ENSHBUG00000013935u2af2a9278.624Haplochromis_burtoni
ENSSDUG00000021434-8477.804ENSHGLG00000005889U2AF29674.414Heterocephalus_glaber_female
ENSSDUG00000021434-8477.804ENSHGLG00100004757U2AF29974.359Heterocephalus_glaber_male
ENSSDUG00000021434-8675.058ENSHCOG00000019367u2af2a9672.399Hippocampus_comes
ENSSDUG00000021434-9484.632ENSIPUG00000009844-9684.165Ictalurus_punctatus
ENSSDUG00000021434-8278.660ENSIPUG00000009077u2af29870.417Ictalurus_punctatus
ENSSDUG00000021434-7978.061ENSIPUG00000007717u2af2a8676.528Ictalurus_punctatus
ENSSDUG00000021434-8477.804ENSSTOG00000019595U2AF29674.414Ictidomys_tridecemlineatus
ENSSDUG00000021434-8477.804ENSJJAG00000017705U2af29674.414Jaculus_jaculus
ENSSDUG00000021434-8676.887ENSKMAG00000005960u2af2a9973.434Kryptolebias_marmoratus
ENSSDUG00000021434-9495.445ENSLBEG00000005001-9995.445Labrus_bergylta
ENSSDUG00000021434-8676.651ENSLBEG00000016162u2af2a9673.707Labrus_bergylta
ENSSDUG00000021434-7780.637ENSLACG00000001648U2AF29980.637Latimeria_chalumnae
ENSSDUG00000021434-9489.588ENSLOCG00000010843-9789.588Lepisosteus_oculatus
ENSSDUG00000021434-5979.791ENSLOCG00000008050u2af2b9469.774Lepisosteus_oculatus
ENSSDUG00000021434-8379.075ENSLAFG00000018056-9674.839Loxodonta_africana
ENSSDUG00000021434-9468.534ENSLAFG00000028496-9668.182Loxodonta_africana
ENSSDUG00000021434-8477.804ENSMFAG00000038383U2AF29674.414Macaca_fascicularis
ENSSDUG00000021434-8477.566ENSMMUG00000004810U2AF29674.200Macaca_mulatta
ENSSDUG00000021434-8478.313ENSMNEG00000042096U2AF29674.839Macaca_nemestrina
ENSSDUG00000021434-9473.820ENSMLEG00000032219U2AF28974.839Mandrillus_leucophaeus
ENSSDUG00000021434-9494.143ENSMAMG00000020158-9694.143Mastacembelus_armatus
ENSSDUG00000021434-8278.102ENSMAMG00000019817u2af2a9972.331Mastacembelus_armatus
ENSSDUG00000021434-9497.180ENSMZEG00005023318-9797.180Maylandia_zebra
ENSSDUG00000021434-8279.012ENSMZEG00005016563u2af2a9673.707Maylandia_zebra
ENSSDUG00000021434-8477.804ENSMAUG00000008180U2af29974.153Mesocricetus_auratus
ENSSDUG00000021434-8478.313ENSMICG00000027681U2AF29873.932Microcebus_murinus
ENSSDUG00000021434-6477.918ENSMOCG00000001018-9977.918Microtus_ochrogaster
ENSSDUG00000021434-8477.804ENSMOCG00000013214-9674.414Microtus_ochrogaster
ENSSDUG00000021434-9468.094ENSMOCG00000007227-9465.962Microtus_ochrogaster
ENSSDUG00000021434-7980.307ENSMMOG00000016600u2af2a9178.870Mola_mola
ENSSDUG00000021434-8188.945ENSMMOG00000000531-8788.670Mola_mola
ENSSDUG00000021434-8677.123ENSMALG00000009985u2af2a9673.707Monopterus_albus
ENSSDUG00000021434-8478.313MGP_CAROLIEiJ_G0029150U2af29674.839Mus_caroli
ENSSDUG00000021434-8478.313ENSMUSG00000030435U2af29980.757Mus_musculus
ENSSDUG00000021434-8478.313MGP_PahariEiJ_G0021017U2af29674.839Mus_pahari
ENSSDUG00000021434-8478.313MGP_SPRETEiJ_G0030203U2af29674.839Mus_spretus
ENSSDUG00000021434-8478.313ENSMPUG00000007135U2AF29674.839Mustela_putorius_furo
ENSSDUG00000021434-5075.697ENSMLUG00000011051-9975.697Myotis_lucifugus
ENSSDUG00000021434-8477.804ENSNGAG00000020369U2af29674.414Nannospalax_galili
ENSSDUG00000021434-8279.012ENSNBRG00000002568u2af2a9278.624Neolamprologus_brichardi
ENSSDUG00000021434-9597.639ENSNBRG00000011100-10097.639Neolamprologus_brichardi
ENSSDUG00000021434-8469.596ENSNLEG00000010562U2AF29980.757Nomascus_leucogenys
ENSSDUG00000021434-8467.229ENSMEUG00000002346U2AF29964.871Notamacropus_eugenii
ENSSDUG00000021434-8472.076ENSODEG00000012729-9669.296Octodon_degus
ENSSDUG00000021434-9455.098ENSODEG00000009254-8363.395Octodon_degus
ENSSDUG00000021434-8875.231ENSONIG00000012793u2af2a9672.961Oreochromis_niloticus
ENSSDUG00000021434-9497.180ENSONIG00000009682-9797.180Oreochromis_niloticus
ENSSDUG00000021434-8676.887ENSORLG00000011545u2af2a9772.727Oryzias_latipes
ENSSDUG00000021434-8676.887ENSORLG00020006941u2af2a9772.727Oryzias_latipes_hni
ENSSDUG00000021434-8676.887ENSORLG00015012843u2af2a9672.629Oryzias_latipes_hsok
ENSSDUG00000021434-8676.887ENSOMEG00000011386u2af2a9973.799Oryzias_melastigma
ENSSDUG00000021434-8477.804ENSOGAG00000007206-9674.414Otolemur_garnettii
ENSSDUG00000021434-8848.188ENSOGAG00000034729-8153.000Otolemur_garnettii
ENSSDUG00000021434-9465.432ENSOARG00000001091U2AF28573.850Ovis_aries
ENSSDUG00000021434-8477.804ENSPPAG00000039782U2AF29674.414Pan_paniscus
ENSSDUG00000021434-8477.804ENSPPRG00000013843U2AF29674.414Panthera_pardus
ENSSDUG00000021434-9468.657ENSPTIG00000005489U2AF28774.396Panthera_tigris_altaica
ENSSDUG00000021434-8477.804ENSPTRG00000011523U2AF29980.757Pan_troglodytes
ENSSDUG00000021434-8478.313ENSPANG00000008459U2AF29674.839Papio_anubis
ENSSDUG00000021434-9489.371ENSPKIG00000014878-9789.371Paramormyrops_kingsleyae
ENSSDUG00000021434-8576.359ENSPKIG00000024346u2af2b9771.552Paramormyrops_kingsleyae
ENSSDUG00000021434-8260.000ENSPSIG00000008014U2AF29957.500Pelodiscus_sinensis
ENSSDUG00000021434-7975.703ENSPMGG00000022980u2af2a9969.546Periophthalmus_magnuspinnatus
ENSSDUG00000021434-8477.804ENSPEMG00000007378U2af29980.757Peromyscus_maniculatus_bairdii
ENSSDUG00000021434-7976.456ENSPMAG00000004097u2af2a10071.975Petromyzon_marinus
ENSSDUG00000021434-8478.043ENSPCIG00000018013U2AF29674.627Phascolarctos_cinereus
ENSSDUG00000021434-9192.857ENSPFOG00000006433-9792.191Poecilia_formosa
ENSSDUG00000021434-8378.922ENSPFOG00000010799u2af2a9673.922Poecilia_formosa
ENSSDUG00000021434-8378.922ENSPLAG00000014365u2af2a9673.922Poecilia_latipinna
ENSSDUG00000021434-9192.857ENSPLAG00000003275-9892.208Poecilia_latipinna
ENSSDUG00000021434-9192.411ENSPMEG00000003734-9891.775Poecilia_mexicana
ENSSDUG00000021434-8378.922ENSPMEG00000002969u2af2a9673.922Poecilia_mexicana
ENSSDUG00000021434-9494.794ENSPREG00000013036-10097.260Poecilia_reticulata
ENSSDUG00000021434-8378.922ENSPREG00000008739u2af2a9973.434Poecilia_reticulata
ENSSDUG00000021434-5779.298ENSPPYG00000010429-7779.298Pongo_abelii
ENSSDUG00000021434-8462.143ENSPCAG00000014399-9660.426Procavia_capensis
ENSSDUG00000021434-8270.720ENSPCAG00000003709-9670.720Procavia_capensis
ENSSDUG00000021434-8477.804ENSPCOG00000025870U2AF29873.932Propithecus_coquereli
ENSSDUG00000021434-8477.566ENSPVAG00000004540U2AF29674.200Pteropus_vampyrus
ENSSDUG00000021434-9497.180ENSPNYG00000011605-9797.180Pundamilia_nyererei
ENSSDUG00000021434-8279.012ENSPNYG00000001438u2af2a9278.624Pundamilia_nyererei
ENSSDUG00000021434-9492.408ENSPNAG00000007182-9792.408Pygocentrus_nattereri
ENSSDUG00000021434-8279.208ENSPNAG00000027289u2af2b9870.625Pygocentrus_nattereri
ENSSDUG00000021434-7979.847ENSPNAG00000017620u2af2a9371.613Pygocentrus_nattereri
ENSSDUG00000021434-8478.313ENSRNOG00000015914U2af29674.839Rattus_norvegicus
ENSSDUG00000021434-8477.566ENSRBIG00000041018U2AF29674.200Rhinopithecus_bieti
ENSSDUG00000021434-8670.481ENSRROG00000031238-9670.538Rhinopithecus_roxellana
ENSSDUG00000021434-7774.372ENSRROG00000031103-10073.882Rhinopithecus_roxellana
ENSSDUG00000021434-8478.313ENSSBOG00000023891U2AF29674.839Saimiri_boliviensis_boliviensis
ENSSDUG00000021434-5168.707ENSSHAG00000001167U2AF28659.067Sarcophilus_harrisii
ENSSDUG00000021434-8279.115ENSSFOG00015019182u2af2b8979.115Scleropages_formosus
ENSSDUG00000021434-9489.371ENSSFOG00015003884-9789.371Scleropages_formosus
ENSSDUG00000021434-9495.228ENSSMAG00000013779-9795.228Scophthalmus_maximus
ENSSDUG00000021434-8675.581ENSSMAG00000012582u2af2a9672.629Scophthalmus_maximus
ENSSDUG00000021434-8279.012ENSSLDG00000022742u2af2a9673.707Seriola_lalandi_dorsalis
ENSSDUG00000021434-9599.785ENSSLDG00000016151-10099.785Seriola_lalandi_dorsalis
ENSSDUG00000021434-8278.208ENSSPUG00000010229U2AF29672.881Sphenodon_punctatus
ENSSDUG00000021434-8279.259ENSSPAG00000022519u2af2a9773.077Stegastes_partitus
ENSSDUG00000021434-9497.180ENSSPAG00000005241-9797.180Stegastes_partitus
ENSSDUG00000021434-8478.313ENSSSCG00000034815U2AF29674.839Sus_scrofa
ENSSDUG00000021434-7978.517ENSTRUG00000005514u2af2a9871.983Takifugu_rubripes
ENSSDUG00000021434-8676.832ENSTNIG00000008106U2AF29673.707Tetraodon_nigroviridis
ENSSDUG00000021434-8389.216ENSTNIG00000011257-9786.393Tetraodon_nigroviridis
ENSSDUG00000021434-7674.866ENSTBEG00000009104U2AF29775.815Tupaia_belangeri
ENSSDUG00000021434-8477.804ENSTTRG00000000987U2AF29674.414Tursiops_truncatus
ENSSDUG00000021434-8279.607ENSUAMG00000019883U2AF29974.082Ursus_americanus
ENSSDUG00000021434-8279.607ENSUMAG00000024586U2AF29980.757Ursus_maritimus
ENSSDUG00000021434-8478.313ENSVVUG00000006956U2AF26674.624Vulpes_vulpes
ENSSDUG00000021434-8180.151ENSXETG00000019128u2af29673.922Xenopus_tropicalis
ENSSDUG00000021434-7980.307ENSXCOG00000019406u2af2a9973.799Xiphophorus_couchianus
ENSSDUG00000021434-8378.922ENSXMAG00000011979u2af2a9673.922Xiphophorus_maculatus
ENSSDUG00000021434-9294.457ENSXMAG00000000768-9294.360Xiphophorus_maculatus

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