EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000021506 (Gene tree)
Gene ID: 111217613
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 15326 bases
Position: chrBDQW01000044.1:2723606-2738931
Accession: 111217613
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000029819	tRNA_int_end_N2	PF12928.7	1.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000030331	-	3609	XM_022739567	ENSSDUP00000029819	519 (aa)	XP_022595288	UPI000BBE0EEA
ENSSDUT00000030324	-	3443	-	ENSSDUP00000029812	402 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000021506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000021506's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000021506	tsen54	97	45.930	ENSG00000182173	TSEN54	100	63.889	Homo_sapiens
ENSSDUG00000021506	tsen54	100	82.274	ENSAPOG00000009659	tsen54	98	82.274	Acanthochromis_polyacanthus
ENSSDUG00000021506	tsen54	96	45.087	ENSAMEG00000009414	TSEN54	96	45.873	Ailuropoda_melanoleuca
ENSSDUG00000021506	tsen54	100	81.696	ENSAOCG00000000152	tsen54	98	81.696	Amphiprion_ocellaris
ENSSDUG00000021506	tsen54	100	81.503	ENSAPEG00000018931	tsen54	98	81.503	Amphiprion_percula
ENSSDUG00000021506	tsen54	100	80.791	ENSATEG00000019860	tsen54	100	81.168	Anabas_testudineus
ENSSDUG00000021506	tsen54	86	46.868	ENSAPLG00000009419	TSEN54	99	46.868	Anas_platyrhynchos
ENSSDUG00000021506	tsen54	97	46.503	ENSACAG00000006714	TSEN54	98	45.747	Anolis_carolinensis
ENSSDUG00000021506	tsen54	97	45.736	ENSANAG00000024061	TSEN54	96	45.930	Aotus_nancymaae
ENSSDUG00000021506	tsen54	100	77.230	ENSACLG00000019800	tsen54	100	76.471	Astatotilapia_calliptera
ENSSDUG00000021506	tsen54	97	58.203	ENSAMXG00000006546	tsen54	97	58.203	Astyanax_mexicanus
ENSSDUG00000021506	tsen54	97	43.605	ENSBTAG00000000824	TSEN54	97	45.367	Bos_taurus
ENSSDUG00000021506	tsen54	97	45.155	ENSCJAG00000014278	TSEN54	96	45.543	Callithrix_jacchus
ENSSDUG00000021506	tsen54	97	45.211	ENSCAFG00000004798	TSEN54	97	45.769	Canis_familiaris
ENSSDUG00000021506	tsen54	97	45.211	ENSCAFG00020000312	TSEN54	97	45.769	Canis_lupus_dingo
ENSSDUG00000021506	tsen54	97	44.186	ENSCHIG00000019908	TSEN54	97	45.753	Capra_hircus
ENSSDUG00000021506	tsen54	86	44.130	ENSTSYG00000037439	TSEN54	99	45.217	Carlito_syrichta
ENSSDUG00000021506	tsen54	97	45.736	ENSCCAG00000036624	TSEN54	96	45.736	Cebus_capucinus
ENSSDUG00000021506	tsen54	97	45.930	ENSCATG00000042877	TSEN54	96	45.038	Cercocebus_atys
ENSSDUG00000021506	tsen54	97	46.484	ENSCLAG00000002924	TSEN54	96	46.484	Chinchilla_lanigera
ENSSDUG00000021506	tsen54	97	45.736	ENSCSAG00000004809	TSEN54	97	45.229	Chlorocebus_sabaeus
ENSSDUG00000021506	tsen54	97	48.170	ENSCPBG00000028071	TSEN54	98	47.114	Chrysemys_picta_bellii
ENSSDUG00000021506	tsen54	97	46.346	ENSCANG00000028053	TSEN54	97	44.847	Colobus_angolensis_palliatus
ENSSDUG00000021506	tsen54	97	45.385	ENSCGRG00001020029	Tsen54	97	45.385	Cricetulus_griseus_chok1gshd
ENSSDUG00000021506	tsen54	84	43.709	ENSCGRG00000016289	Tsen54	99	43.709	Cricetulus_griseus_crigri
ENSSDUG00000021506	tsen54	81	62.233	ENSCSEG00000020586	tsen54	99	62.233	Cynoglossus_semilaevis
ENSSDUG00000021506	tsen54	81	59.059	ENSDARG00000036844	tsen54	100	59.294	Danio_rerio
ENSSDUG00000021506	tsen54	97	44.487	ENSDNOG00000018452	TSEN54	97	45.681	Dasypus_novemcinctus
ENSSDUG00000021506	tsen54	97	46.887	ENSDORG00000004073	Tsen54	97	46.821	Dipodomys_ordii
ENSSDUG00000021506	tsen54	76	43.125	ENSEBUG00000005203	TSEN54	73	43.125	Eptatretus_burgeri
ENSSDUG00000021506	tsen54	97	45.817	ENSEASG00005000579	TSEN54	97	45.817	Equus_asinus_asinus
ENSSDUG00000021506	tsen54	97	46.198	ENSECAG00000004924	TSEN54	97	46.198	Equus_caballus
ENSSDUG00000021506	tsen54	86	42.735	ENSEEUG00000008467	TSEN54	99	43.074	Erinaceus_europaeus
ENSSDUG00000021506	tsen54	99	63.168	ENSELUG00000017703	tsen54	92	63.720	Esox_lucius
ENSSDUG00000021506	tsen54	97	45.594	ENSFCAG00000023712	TSEN54	97	46.360	Felis_catus
ENSSDUG00000021506	tsen54	93	47.082	ENSFALG00000001119	TSEN54	92	47.284	Ficedula_albicollis
ENSSDUG00000021506	tsen54	86	45.295	ENSFDAG00000019090	TSEN54	99	45.295	Fukomys_damarensis
ENSSDUG00000021506	tsen54	100	73.423	ENSFHEG00000005470	tsen54	100	73.423	Fundulus_heteroclitus
ENSSDUG00000021506	tsen54	82	57.812	ENSGMOG00000013146	tsen54	99	57.812	Gadus_morhua
ENSSDUG00000021506	tsen54	93	45.090	ENSGALG00000047163	TSEN54	96	45.090	Gallus_gallus
ENSSDUG00000021506	tsen54	100	70.962	ENSGAFG00000005111	tsen54	100	70.962	Gambusia_affinis
ENSSDUG00000021506	tsen54	97	68.972	ENSGACG00000014987	tsen54	100	68.972	Gasterosteus_aculeatus
ENSSDUG00000021506	tsen54	97	48.549	ENSGAGG00000006825	TSEN54	96	48.549	Gopherus_agassizii
ENSSDUG00000021506	tsen54	96	45.914	ENSGGOG00000009417	TSEN54	99	45.402	Gorilla_gorilla
ENSSDUG00000021506	tsen54	90	75.891	ENSHBUG00000018296	tsen54	92	75.052	Haplochromis_burtoni
ENSSDUG00000021506	tsen54	97	45.865	ENSHGLG00000007979	TSEN54	97	45.865	Heterocephalus_glaber_female
ENSSDUG00000021506	tsen54	97	44.925	ENSHGLG00100005497	TSEN54	97	44.925	Heterocephalus_glaber_male
ENSSDUG00000021506	tsen54	81	65.476	ENSHCOG00000007481	tsen54	100	65.476	Hippocampus_comes
ENSSDUG00000021506	tsen54	97	53.307	ENSIPUG00000000590	tsen54	97	52.918	Ictalurus_punctatus
ENSSDUG00000021506	tsen54	97	45.898	ENSSTOG00000012883	TSEN54	97	45.703	Ictidomys_tridecemlineatus
ENSSDUG00000021506	tsen54	97	47.206	ENSJJAG00000007365	Tsen54	97	47.206	Jaculus_jaculus
ENSSDUG00000021506	tsen54	100	71.800	ENSKMAG00000006944	tsen54	100	71.429	Kryptolebias_marmoratus
ENSSDUG00000021506	tsen54	100	73.333	ENSLBEG00000004199	tsen54	100	73.333	Labrus_bergylta
ENSSDUG00000021506	tsen54	97	43.511	ENSLACG00000009497	TSEN54	99	43.511	Latimeria_chalumnae
ENSSDUG00000021506	tsen54	99	55.224	ENSLOCG00000011191	tsen54	99	55.597	Lepisosteus_oculatus
ENSSDUG00000021506	tsen54	92	43.673	ENSLAFG00000011655	TSEN54	92	45.510	Loxodonta_africana
ENSSDUG00000021506	tsen54	97	45.736	ENSMFAG00000000712	TSEN54	97	45.229	Macaca_fascicularis
ENSSDUG00000021506	tsen54	97	45.736	ENSMNEG00000029199	TSEN54	97	45.229	Macaca_nemestrina
ENSSDUG00000021506	tsen54	86	44.323	ENSMLEG00000044168	TSEN54	88	43.777	Mandrillus_leucophaeus
ENSSDUG00000021506	tsen54	100	80.154	ENSMAMG00000019773	tsen54	100	80.539	Mastacembelus_armatus
ENSSDUG00000021506	tsen54	100	76.850	ENSMZEG00005000884	tsen54	100	76.091	Maylandia_zebra
ENSSDUG00000021506	tsen54	93	44.800	ENSMGAG00000009556	TSEN54	92	45.090	Meleagris_gallopavo
ENSSDUG00000021506	tsen54	97	45.577	ENSMAUG00000016838	Tsen54	97	45.577	Mesocricetus_auratus
ENSSDUG00000021506	tsen54	97	45.243	ENSMICG00000044012	TSEN54	96	46.821	Microcebus_murinus
ENSSDUG00000021506	tsen54	97	44.814	ENSMOCG00000021585	Tsen54	97	44.814	Microtus_ochrogaster
ENSSDUG00000021506	tsen54	96	70.040	ENSMMOG00000020189	tsen54	99	70.040	Mola_mola
ENSSDUG00000021506	tsen54	97	44.423	ENSMODG00000007438	TSEN54	95	44.423	Monodelphis_domestica
ENSSDUG00000021506	tsen54	99	82.692	ENSMALG00000020573	tsen54	99	82.692	Monopterus_albus
ENSSDUG00000021506	tsen54	97	44.000	MGP_CAROLIEiJ_G0017417	Tsen54	97	44.000	Mus_caroli
ENSSDUG00000021506	tsen54	97	44.381	ENSMUSG00000020781	Tsen54	97	44.381	Mus_musculus
ENSSDUG00000021506	tsen54	97	45.627	MGP_PahariEiJ_G0018547	Tsen54	97	45.627	Mus_pahari
ENSSDUG00000021506	tsen54	97	44.571	MGP_SPRETEiJ_G0018262	Tsen54	97	44.571	Mus_spretus
ENSSDUG00000021506	tsen54	97	43.403	ENSMPUG00000013870	TSEN54	97	44.168	Mustela_putorius_furo
ENSSDUG00000021506	tsen54	97	42.176	ENSMLUG00000015298	TSEN54	96	44.444	Myotis_lucifugus
ENSSDUG00000021506	tsen54	97	46.304	ENSNGAG00000015673	Tsen54	97	46.304	Nannospalax_galili
ENSSDUG00000021506	tsen54	88	40.535	ENSMEUG00000011908	TSEN54	99	40.741	Notamacropus_eugenii
ENSSDUG00000021506	tsen54	97	42.636	ENSOPRG00000012513	TSEN54	96	42.636	Ochotona_princeps
ENSSDUG00000021506	tsen54	100	77.083	ENSONIG00000009543	tsen54	100	76.515	Oreochromis_niloticus
ENSSDUG00000021506	tsen54	97	43.186	ENSOCUG00000009875	TSEN54	97	42.830	Oryctolagus_cuniculus
ENSSDUG00000021506	tsen54	100	65.643	ENSORLG00000000852	tsen54	100	65.451	Oryzias_latipes
ENSSDUG00000021506	tsen54	100	65.067	ENSORLG00020018221	tsen54	100	65.643	Oryzias_latipes_hni
ENSSDUG00000021506	tsen54	98	65.815	ENSORLG00015009413	tsen54	99	66.405	Oryzias_latipes_hsok
ENSSDUG00000021506	tsen54	100	67.630	ENSOMEG00000014402	tsen54	97	67.630	Oryzias_melastigma
ENSSDUG00000021506	tsen54	97	46.214	ENSOGAG00000001442	TSEN54	97	46.004	Otolemur_garnettii
ENSSDUG00000021506	tsen54	86	42.358	ENSOARG00000010361	TSEN54	99	43.696	Ovis_aries
ENSSDUG00000021506	tsen54	94	45.219	ENSPPAG00000043519	TSEN54	99	45.614	Pan_paniscus
ENSSDUG00000021506	tsen54	97	45.785	ENSPPRG00000009162	TSEN54	97	46.552	Panthera_pardus
ENSSDUG00000021506	tsen54	86	43.750	ENSPTIG00000019312	TSEN54	96	45.197	Panthera_tigris_altaica
ENSSDUG00000021506	tsen54	97	46.124	ENSPTRG00000009646	TSEN54	97	45.611	Pan_troglodytes
ENSSDUG00000021506	tsen54	97	45.543	ENSPANG00000020133	TSEN54	96	45.098	Papio_anubis
ENSSDUG00000021506	tsen54	99	53.818	ENSPKIG00000023018	tsen54	99	54.394	Paramormyrops_kingsleyae
ENSSDUG00000021506	tsen54	81	45.000	ENSPSIG00000012807	TSEN54	100	45.000	Pelodiscus_sinensis
ENSSDUG00000021506	tsen54	93	49.898	ENSPMGG00000019578	tsen54	100	49.898	Periophthalmus_magnuspinnatus
ENSSDUG00000021506	tsen54	97	45.594	ENSPEMG00000014857	Tsen54	97	45.594	Peromyscus_maniculatus_bairdii
ENSSDUG00000021506	tsen54	100	71.374	ENSPFOG00000022740	tsen54	100	71.374	Poecilia_formosa
ENSSDUG00000021506	tsen54	100	71.731	ENSPLAG00000014847	tsen54	100	71.731	Poecilia_latipinna
ENSSDUG00000021506	tsen54	100	71.923	ENSPMEG00000022876	tsen54	100	71.923	Poecilia_mexicana
ENSSDUG00000021506	tsen54	100	70.962	ENSPREG00000013090	tsen54	100	70.962	Poecilia_reticulata
ENSSDUG00000021506	tsen54	91	44.979	ENSPPYG00000008629	TSEN54	99	44.979	Pongo_abelii
ENSSDUG00000021506	tsen54	72	60.510	ENSPCAG00000002093	TSEN54	75	60.510	Procavia_capensis
ENSSDUG00000021506	tsen54	97	45.098	ENSPCOG00000027880	TSEN54	97	45.686	Propithecus_coquereli
ENSSDUG00000021506	tsen54	97	45.577	ENSPVAG00000008446	TSEN54	97	46.228	Pteropus_vampyrus
ENSSDUG00000021506	tsen54	94	75.600	ENSPNYG00000010217	tsen54	100	74.800	Pundamilia_nyererei
ENSSDUG00000021506	tsen54	97	55.985	ENSPNAG00000003770	tsen54	97	55.985	Pygocentrus_nattereri
ENSSDUG00000021506	tsen54	97	46.498	ENSRNOG00000004598	Tsen54	97	46.498	Rattus_norvegicus
ENSSDUG00000021506	tsen54	97	46.346	ENSRBIG00000043040	TSEN54	97	44.847	Rhinopithecus_bieti
ENSSDUG00000021506	tsen54	97	46.346	ENSRROG00000030797	TSEN54	97	44.847	Rhinopithecus_roxellana
ENSSDUG00000021506	tsen54	97	43.023	ENSSBOG00000013543	TSEN54	96	43.411	Saimiri_boliviensis_boliviensis
ENSSDUG00000021506	tsen54	97	43.289	ENSSHAG00000018127	TSEN54	96	43.100	Sarcophilus_harrisii
ENSSDUG00000021506	tsen54	81	57.710	ENSSFOG00015004093	tsen54	99	57.710	Scleropages_formosus
ENSSDUG00000021506	tsen54	97	76.265	ENSSMAG00000012449	tsen54	98	76.265	Scophthalmus_maximus
ENSSDUG00000021506	tsen54	100	98.844	ENSSLDG00000016303	tsen54	100	98.844	Seriola_lalandi_dorsalis
ENSSDUG00000021506	tsen54	80	43.560	ENSSPUG00000008988	TSEN54	96	43.091	Sphenodon_punctatus
ENSSDUG00000021506	tsen54	81	73.095	ENSSPAG00000008047	tsen54	100	73.095	Stegastes_partitus
ENSSDUG00000021506	tsen54	93	80.000	ENSSPAG00000008098	-	100	80.000	Stegastes_partitus
ENSSDUG00000021506	tsen54	97	45.736	ENSSSCG00000036852	TSEN54	97	46.422	Sus_scrofa
ENSSDUG00000021506	tsen54	86	46.272	ENSTGUG00000008548	TSEN54	99	46.272	Taeniopygia_guttata
ENSSDUG00000021506	tsen54	100	68.786	ENSTRUG00000004230	tsen54	100	68.786	Takifugu_rubripes
ENSSDUG00000021506	tsen54	97	64.479	ENSTNIG00000011281	tsen54	98	65.444	Tetraodon_nigroviridis
ENSSDUG00000021506	tsen54	86	42.208	ENSTTRG00000015828	TSEN54	99	43.355	Tursiops_truncatus
ENSSDUG00000021506	tsen54	81	41.743	ENSUAMG00000010045	TSEN54	99	42.922	Ursus_americanus
ENSSDUG00000021506	tsen54	83	43.207	ENSUMAG00000008979	TSEN54	99	44.124	Ursus_maritimus
ENSSDUG00000021506	tsen54	96	45.455	ENSVVUG00000011411	TSEN54	97	46.019	Vulpes_vulpes
ENSSDUG00000021506	tsen54	97	46.050	ENSXETG00000012532	tsen54	100	60.000	Xenopus_tropicalis
ENSSDUG00000021506	tsen54	97	62.648	ENSXCOG00000018245	tsen54	100	66.588	Xiphophorus_couchianus
ENSSDUG00000021506	tsen54	100	71.538	ENSXMAG00000018818	tsen54	100	71.538	Xiphophorus_maculatus