EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000021680 (Gene tree)
Gene ID: 111233075
Gene Symbol: sfswap
Alias: sfrs8|srsf8|zgc:56184
Full Name: splicing factor SWAP
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 46654 bases
Position: chrBDQW01000365.1:131690-178343
Accession: 111233075
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030083	DRY_EERY	PF09750.9	5.5e-31	1	1
ENSSDUP00000030083	Surp	PF01805.20	3.1e-28	1	2
ENSSDUP00000030083	Surp	PF01805.20	3.1e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000030598	-	3818	XM_022760819	ENSSDUP00000030083	974 (aa)	XP_022616540	UPI000BBE7AE3

Gene Model

Click here to download ENSSDUG00000021680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000021680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000021680	sfswap	56	67.196	ENSG00000061936	SFSWAP	67	81.481	Homo_sapiens
ENSSDUG00000021680	sfswap	79	97.826	ENSAPOG00000005784	sfswap	77	97.826	Acanthochromis_polyacanthus
ENSSDUG00000021680	sfswap	66	59.286	ENSAMEG00000013818	SFSWAP	72	60.364	Ailuropoda_melanoleuca
ENSSDUG00000021680	sfswap	75	87.772	ENSAOCG00000016469	sfswap	77	87.686	Amphiprion_ocellaris
ENSSDUG00000021680	sfswap	75	88.179	ENSAPEG00000004965	sfswap	77	88.092	Amphiprion_percula
ENSSDUG00000021680	sfswap	100	82.329	ENSATEG00000021053	sfswap	99	89.851	Anabas_testudineus
ENSSDUG00000021680	sfswap	53	65.969	ENSAPLG00000013808	SFSWAP	71	59.007	Anas_platyrhynchos
ENSSDUG00000021680	sfswap	62	58.815	ENSACAG00000007220	SFSWAP	72	57.295	Anolis_carolinensis
ENSSDUG00000021680	sfswap	85	59.972	ENSANAG00000001518	SFSWAP	71	61.406	Aotus_nancymaae
ENSSDUG00000021680	sfswap	74	84.848	ENSACLG00000020159	sfswap	79	84.848	Astatotilapia_calliptera
ENSSDUG00000021680	sfswap	69	68.011	ENSAMXG00000008657	sfswap	72	68.539	Astyanax_mexicanus
ENSSDUG00000021680	sfswap	85	58.174	ENSBTAG00000000439	SFSWAP	91	58.981	Bos_taurus
ENSSDUG00000021680	sfswap	97	50.554	ENSCJAG00000003613	SFSWAP	87	61.263	Callithrix_jacchus
ENSSDUG00000021680	sfswap	66	59.052	ENSCAFG00000006625	SFSWAP	71	61.151	Canis_familiaris
ENSSDUG00000021680	sfswap	57	52.113	ENSCAFG00020011254	SFSWAP	68	54.594	Canis_lupus_dingo
ENSSDUG00000021680	sfswap	52	66.755	ENSCHIG00000008838	SFSWAP	76	59.383	Capra_hircus
ENSSDUG00000021680	sfswap	52	65.963	ENSTSYG00000010303	SFSWAP	72	60.475	Carlito_syrichta
ENSSDUG00000021680	sfswap	56	66.489	ENSCCAG00000037255	SFSWAP	71	61.748	Cebus_capucinus
ENSSDUG00000021680	sfswap	56	65.879	ENSCATG00000031094	SFSWAP	71	61.254	Cercocebus_atys
ENSSDUG00000021680	sfswap	56	65.879	ENSCSAG00000001884	SFSWAP	71	61.254	Chlorocebus_sabaeus
ENSSDUG00000021680	sfswap	62	66.770	ENSCHOG00000003578	SFSWAP	70	79.070	Choloepus_hoffmanni
ENSSDUG00000021680	sfswap	68	57.465	ENSCPBG00000024757	SFSWAP	70	59.803	Chrysemys_picta_bellii
ENSSDUG00000021680	sfswap	56	65.617	ENSCANG00000036501	SFSWAP	71	61.111	Colobus_angolensis_palliatus
ENSSDUG00000021680	sfswap	76	66.404	ENSCGRG00001011284	Sfswap	71	61.473	Cricetulus_griseus_chok1gshd
ENSSDUG00000021680	sfswap	76	66.404	ENSCGRG00000017417	Sfswap	71	61.473	Cricetulus_griseus_crigri
ENSSDUG00000021680	sfswap	75	80.326	ENSCSEG00000003773	sfswap	76	80.601	Cynoglossus_semilaevis
ENSSDUG00000021680	sfswap	62	66.939	ENSCVAG00000001205	-	83	69.643	Cyprinodon_variegatus
ENSSDUG00000021680	sfswap	70	70.056	ENSDARG00000005980	sfswap	73	69.024	Danio_rerio
ENSSDUG00000021680	sfswap	68	58.087	ENSDNOG00000018742	SFSWAP	69	60.674	Dasypus_novemcinctus
ENSSDUG00000021680	sfswap	67	53.295	ENSDORG00000010352	Sfswap	72	55.508	Dipodomys_ordii
ENSSDUG00000021680	sfswap	60	97.778	ENSETEG00000016657	-	59	97.778	Echinops_telfairi
ENSSDUG00000021680	sfswap	70	38.729	ENSEBUG00000016748	SFSWAP	73	39.820	Eptatretus_burgeri
ENSSDUG00000021680	sfswap	66	59.483	ENSEASG00005016502	SFSWAP	71	61.727	Equus_asinus_asinus
ENSSDUG00000021680	sfswap	66	59.483	ENSECAG00000007657	SFSWAP	72	61.727	Equus_caballus
ENSSDUG00000021680	sfswap	58	59.459	ENSEEUG00000001713	SFSWAP	64	60.452	Erinaceus_europaeus
ENSSDUG00000021680	sfswap	69	68.151	ENSELUG00000010942	sfswap	94	66.077	Esox_lucius
ENSSDUG00000021680	sfswap	97	50.600	ENSFCAG00000010778	SFSWAP	71	62.232	Felis_catus
ENSSDUG00000021680	sfswap	81	58.714	ENSFALG00000009577	SFSWAP	71	61.386	Ficedula_albicollis
ENSSDUG00000021680	sfswap	67	56.328	ENSFDAG00000017235	SFSWAP	71	60.226	Fukomys_damarensis
ENSSDUG00000021680	sfswap	53	67.016	ENSGALG00000002487	SFSWAP	72	58.865	Gallus_gallus
ENSSDUG00000021680	sfswap	75	80.244	ENSGAFG00000006272	sfswap	81	80.244	Gambusia_affinis
ENSSDUG00000021680	sfswap	84	70.166	ENSGACG00000017647	sfswap	96	66.074	Gasterosteus_aculeatus
ENSSDUG00000021680	sfswap	68	57.465	ENSGAGG00000002611	SFSWAP	70	60.141	Gopherus_agassizii
ENSSDUG00000021680	sfswap	52	67.196	ENSGGOG00000014877	SFSWAP	71	61.803	Gorilla_gorilla
ENSSDUG00000021680	sfswap	74	84.732	ENSHBUG00000005629	sfswap	78	84.732	Haplochromis_burtoni
ENSSDUG00000021680	sfswap	90	67.192	ENSHGLG00000019216	SFSWAP	71	61.898	Heterocephalus_glaber_female
ENSSDUG00000021680	sfswap	90	67.368	ENSHGLG00100019350	SFSWAP	71	61.810	Heterocephalus_glaber_male
ENSSDUG00000021680	sfswap	76	77.674	ENSHCOG00000009475	sfswap	78	77.016	Hippocampus_comes
ENSSDUG00000021680	sfswap	83	70.707	ENSIPUG00000010598	sfswap	88	70.480	Ictalurus_punctatus
ENSSDUG00000021680	sfswap	53	67.725	ENSJJAG00000006609	Sfswap	72	61.702	Jaculus_jaculus
ENSSDUG00000021680	sfswap	74	79.508	ENSKMAG00000013168	sfswap	77	80.161	Kryptolebias_marmoratus
ENSSDUG00000021680	sfswap	72	84.046	ENSLBEG00000010239	sfswap	78	83.761	Labrus_bergylta
ENSSDUG00000021680	sfswap	71	57.279	ENSLACG00000018678	SFSWAP	75	57.645	Latimeria_chalumnae
ENSSDUG00000021680	sfswap	83	59.486	ENSMFAG00000037352	SFSWAP	67	61.254	Macaca_fascicularis
ENSSDUG00000021680	sfswap	85	60.342	ENSMMUG00000020343	SFSWAP	71	59.632	Macaca_mulatta
ENSSDUG00000021680	sfswap	85	60.342	ENSMNEG00000041002	SFSWAP	71	59.632	Macaca_nemestrina
ENSSDUG00000021680	sfswap	56	63.228	ENSMLEG00000035728	SFSWAP	71	59.943	Mandrillus_leucophaeus
ENSSDUG00000021680	sfswap	75	89.609	ENSMAMG00000006631	sfswap	78	89.609	Mastacembelus_armatus
ENSSDUG00000021680	sfswap	74	84.848	ENSMZEG00005017834	SFSWAP	76	84.848	Maylandia_zebra
ENSSDUG00000021680	sfswap	53	67.717	ENSMOCG00000014390	Sfswap	71	61.756	Microtus_ochrogaster
ENSSDUG00000021680	sfswap	54	61.934	ENSMODG00000015581	SFSWAP	67	54.124	Monodelphis_domestica
ENSSDUG00000021680	sfswap	81	93.182	ENSMALG00000012603	sfswap	95	85.501	Monopterus_albus
ENSSDUG00000021680	sfswap	53	66.667	MGP_CAROLIEiJ_G0027780	Sfswap	67	79.012	Mus_caroli
ENSSDUG00000021680	sfswap	53	67.192	ENSMUSG00000029439	Sfswap	67	79.012	Mus_musculus
ENSSDUG00000021680	sfswap	53	66.667	MGP_PahariEiJ_G0024360	Sfswap	67	79.012	Mus_pahari
ENSSDUG00000021680	sfswap	53	67.192	MGP_SPRETEiJ_G0028779	Sfswap	67	79.012	Mus_spretus
ENSSDUG00000021680	sfswap	97	51.055	ENSMPUG00000002218	SFSWAP	74	58.967	Mustela_putorius_furo
ENSSDUG00000021680	sfswap	72	56.991	ENSMLUG00000011296	SFSWAP	78	58.936	Myotis_lucifugus
ENSSDUG00000021680	sfswap	68	83.433	ENSNBRG00000020857	sfswap	73	83.910	Neolamprologus_brichardi
ENSSDUG00000021680	sfswap	83	58.606	ENSNLEG00000008386	SFSWAP	72	61.803	Nomascus_leucogenys
ENSSDUG00000021680	sfswap	71	60.934	ENSOPRG00000006983	-	75	62.298	Ochotona_princeps
ENSSDUG00000021680	sfswap	86	74.797	ENSONIG00000003757	sfswap	89	79.592	Oreochromis_niloticus
ENSSDUG00000021680	sfswap	74	78.875	ENSORLG00000010983	sfswap	77	78.919	Oryzias_latipes
ENSSDUG00000021680	sfswap	74	79.561	ENSORLG00020010779	sfswap	77	79.189	Oryzias_latipes_hni
ENSSDUG00000021680	sfswap	74	79.589	ENSORLG00015023093	sfswap	78	79.217	Oryzias_latipes_hsok
ENSSDUG00000021680	sfswap	74	80.886	ENSOMEG00000022065	sfswap	77	80.435	Oryzias_melastigma
ENSSDUG00000021680	sfswap	52	66.755	ENSOARG00000014314	SFSWAP	75	59.754	Ovis_aries
ENSSDUG00000021680	sfswap	56	66.489	ENSPPAG00000036706	SFSWAP	73	61.803	Pan_paniscus
ENSSDUG00000021680	sfswap	81	57.654	ENSPTIG00000004304	SFSWAP	72	56.340	Panthera_tigris_altaica
ENSSDUG00000021680	sfswap	56	66.489	ENSPTRG00000005640	SFSWAP	74	61.803	Pan_troglodytes
ENSSDUG00000021680	sfswap	56	65.879	ENSPANG00000019737	SFSWAP	71	61.254	Papio_anubis
ENSSDUG00000021680	sfswap	73	65.442	ENSPKIG00000008327	sfswap	77	66.396	Paramormyrops_kingsleyae
ENSSDUG00000021680	sfswap	77	67.192	ENSPEMG00000001237	Sfswap	71	61.103	Peromyscus_maniculatus_bairdii
ENSSDUG00000021680	sfswap	66	55.971	ENSPCIG00000006062	SFSWAP	68	58.046	Phascolarctos_cinereus
ENSSDUG00000021680	sfswap	54	66.931	ENSPPYG00000005129	SFSWAP	72	61.660	Pongo_abelii
ENSSDUG00000021680	sfswap	50	61.477	ENSPCAG00000004977	-	57	60.792	Procavia_capensis
ENSSDUG00000021680	sfswap	74	66.402	ENSPCOG00000023786	SFSWAP	71	61.230	Propithecus_coquereli
ENSSDUG00000021680	sfswap	58	84.211	ENSPVAG00000014918	SFSWAP	57	84.211	Pteropus_vampyrus
ENSSDUG00000021680	sfswap	100	83.011	ENSPNYG00000012660	sfswap	100	82.909	Pundamilia_nyererei
ENSSDUG00000021680	sfswap	79	74.576	ENSPNAG00000007073	sfswap	77	68.316	Pygocentrus_nattereri
ENSSDUG00000021680	sfswap	78	66.667	ENSRNOG00000000931	Sfswap	98	50.840	Rattus_norvegicus
ENSSDUG00000021680	sfswap	56	65.879	ENSRBIG00000036330	SFSWAP	69	59.552	Rhinopithecus_bieti
ENSSDUG00000021680	sfswap	56	65.879	ENSRROG00000032001	SFSWAP	71	61.396	Rhinopithecus_roxellana
ENSSDUG00000021680	sfswap	65	66.935	ENSSBOG00000026217	SFSWAP	76	58.871	Saimiri_boliviensis_boliviensis
ENSSDUG00000021680	sfswap	62	57.895	ENSSHAG00000014232	SFSWAP	73	58.346	Sarcophilus_harrisii
ENSSDUG00000021680	sfswap	71	69.909	ENSSFOG00015000766	sfswap	70	70.106	Scleropages_formosus
ENSSDUG00000021680	sfswap	75	86.450	ENSSMAG00000018718	sfswap	77	86.721	Scophthalmus_maximus
ENSSDUG00000021680	sfswap	100	98.469	ENSSLDG00000010835	sfswap	100	98.469	Seriola_lalandi_dorsalis
ENSSDUG00000021680	sfswap	68	69.643	ENSSARG00000000424	SFSWAP	82	60.916	Sorex_araneus
ENSSDUG00000021680	sfswap	57	55.075	ENSSPUG00000010272	SFSWAP	70	57.661	Sphenodon_punctatus
ENSSDUG00000021680	sfswap	74	87.431	ENSSPAG00000014310	sfswap	75	87.214	Stegastes_partitus
ENSSDUG00000021680	sfswap	85	57.337	ENSSSCG00000009744	SFSWAP	75	60.136	Sus_scrofa
ENSSDUG00000021680	sfswap	67	55.448	ENSTGUG00000004623	SFSWAP	73	60.227	Taeniopygia_guttata
ENSSDUG00000021680	sfswap	64	78.049	ENSTTRG00000013478	SFSWAP	78	78.049	Tursiops_truncatus
ENSSDUG00000021680	sfswap	68	56.118	ENSUMAG00000002957	SFSWAP	76	56.557	Ursus_maritimus
ENSSDUG00000021680	sfswap	66	59.052	ENSVVUG00000010753	SFSWAP	71	61.151	Vulpes_vulpes
ENSSDUG00000021680	sfswap	86	54.461	ENSXETG00000009350	sfswap	93	55.867	Xenopus_tropicalis