EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000021711 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5341 bases
Position: chrBDQW01000149.1:23223865-23229205
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030119	MMR_HSR1	PF01926.23	5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000030635	-	456	-	ENSSDUP00000030119	151 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000021711's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000021711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000021711	-	81	40.164	ENSSDUG00000023540	-	52	40.164
ENSSDUG00000021711	-	71	41.121	ENSSDUG00000019892	-	63	46.970
ENSSDUG00000021711	-	81	33.103	ENSSDUG00000022299	-	54	33.103

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000021711	-	71	76.636	ENSAPOG00000001262	-	50	76.636	Acanthochromis_polyacanthus
ENSSDUG00000021711	-	70	55.140	ENSAPOG00000007361	-	56	55.140	Acanthochromis_polyacanthus
ENSSDUG00000021711	-	59	50.562	ENSACIG00000001465	-	54	50.562	Amphilophus_citrinellus
ENSSDUG00000021711	-	88	37.594	ENSACIG00000014703	-	53	37.594	Amphilophus_citrinellus
ENSSDUG00000021711	-	70	48.148	ENSACIG00000008666	-	53	48.148	Amphilophus_citrinellus
ENSSDUG00000021711	-	89	39.552	ENSACIG00000014716	-	52	39.552	Amphilophus_citrinellus
ENSSDUG00000021711	-	59	61.111	ENSAOCG00000011143	-	53	61.111	Amphiprion_ocellaris
ENSSDUG00000021711	-	53	53.086	ENSAOCG00000012536	-	63	53.086	Amphiprion_ocellaris
ENSSDUG00000021711	-	50	59.211	ENSAPEG00000021785	-	87	59.211	Amphiprion_percula
ENSSDUG00000021711	-	57	57.471	ENSAPEG00000018782	-	58	57.471	Amphiprion_percula
ENSSDUG00000021711	-	89	40.441	ENSACLG00000011599	-	52	40.441	Astatotilapia_calliptera
ENSSDUG00000021711	-	81	40.984	ENSACLG00000011572	-	51	40.984	Astatotilapia_calliptera
ENSSDUG00000021711	-	87	37.879	ENSACLG00000023766	zgc:113625	53	37.879	Astatotilapia_calliptera
ENSSDUG00000021711	-	51	54.545	ENSACLG00000010743	-	71	54.545	Astatotilapia_calliptera
ENSSDUG00000021711	-	83	40.476	ENSACLG00000023502	-	54	40.476	Astatotilapia_calliptera
ENSSDUG00000021711	-	59	53.933	ENSACLG00000021980	-	65	53.933	Astatotilapia_calliptera
ENSSDUG00000021711	-	51	55.844	ENSACLG00000005151	-	72	55.844	Astatotilapia_calliptera
ENSSDUG00000021711	-	59	50.562	ENSAMXG00000037339	-	62	50.562	Astyanax_mexicanus
ENSSDUG00000021711	-	60	51.111	ENSAMXG00000036272	-	53	46.875	Astyanax_mexicanus
ENSSDUG00000021711	-	63	46.316	ENSAMXG00000002562	-	61	48.315	Astyanax_mexicanus
ENSSDUG00000021711	-	60	52.222	ENSAMXG00000038694	-	60	52.222	Astyanax_mexicanus
ENSSDUG00000021711	-	96	30.405	ENSAMXG00000041240	-	59	30.405	Astyanax_mexicanus
ENSSDUG00000021711	-	58	57.955	ENSAMXG00000029911	-	56	57.955	Astyanax_mexicanus
ENSSDUG00000021711	-	58	53.409	ENSCVAG00000017220	-	53	53.409	Cyprinodon_variegatus
ENSSDUG00000021711	-	60	61.111	ENSDARG00000078182	zgc:194443	70	61.842	Danio_rerio
ENSSDUG00000021711	-	67	53.465	ENSDARG00000103883	si:ch1073-181h11.2	65	53.465	Danio_rerio
ENSSDUG00000021711	-	89	49.254	ENSFHEG00000015169	-	54	47.619	Fundulus_heteroclitus
ENSSDUG00000021711	-	58	45.455	ENSGAFG00000003916	-	75	45.455	Gambusia_affinis
ENSSDUG00000021711	-	58	46.591	ENSGAFG00000000209	-	50	46.591	Gambusia_affinis
ENSSDUG00000021711	-	81	40.164	ENSHBUG00000023776	-	51	40.164	Haplochromis_burtoni
ENSSDUG00000021711	-	87	39.394	ENSHBUG00000006804	-	50	39.394	Haplochromis_burtoni
ENSSDUG00000021711	-	68	54.054	ENSHBUG00000005397	-	50	54.054	Haplochromis_burtoni
ENSSDUG00000021711	-	59	49.438	ENSHBUG00000023810	-	59	49.438	Haplochromis_burtoni
ENSSDUG00000021711	-	87	53.684	ENSHBUG00000010422	-	58	53.684	Haplochromis_burtoni
ENSSDUG00000021711	-	87	40.152	ENSHBUG00000009430	-	52	40.152	Haplochromis_burtoni
ENSSDUG00000021711	-	89	38.519	ENSHCOG00000016249	zgc:113625	50	38.519	Hippocampus_comes
ENSSDUG00000021711	-	59	52.809	ENSKMAG00000001775	-	67	52.809	Kryptolebias_marmoratus
ENSSDUG00000021711	-	56	55.294	ENSLBEG00000011881	-	51	55.294	Labrus_bergylta
ENSSDUG00000021711	-	81	40.984	ENSMZEG00005020544	zgc:113625	51	40.984	Maylandia_zebra
ENSSDUG00000021711	-	81	40.164	ENSMZEG00005020540	zgc:113625	51	40.164	Maylandia_zebra
ENSSDUG00000021711	-	87	37.879	ENSMZEG00005012877	-	53	37.879	Maylandia_zebra
ENSSDUG00000021711	-	62	47.312	ENSMZEG00005020549	-	61	47.312	Maylandia_zebra
ENSSDUG00000021711	-	81	39.344	ENSMZEG00005020526	-	50	39.344	Maylandia_zebra
ENSSDUG00000021711	-	87	37.879	ENSMZEG00005020524	zgc:113625	53	37.879	Maylandia_zebra
ENSSDUG00000021711	-	87	37.879	ENSMZEG00005012829	zgc:113625	53	37.879	Maylandia_zebra
ENSSDUG00000021711	-	51	54.545	ENSMZEG00005002838	-	67	54.545	Maylandia_zebra
ENSSDUG00000021711	-	71	52.778	ENSMZEG00005006491	-	53	52.778	Maylandia_zebra
ENSSDUG00000021711	-	83	39.200	ENSMZEG00005012880	-	52	39.200	Maylandia_zebra
ENSSDUG00000021711	-	59	53.933	ENSMZEG00005006466	-	55	53.933	Maylandia_zebra
ENSSDUG00000021711	-	81	39.344	ENSMZEG00005020530	-	51	39.344	Maylandia_zebra
ENSSDUG00000021711	-	81	39.344	ENSMZEG00005020561	-	51	39.344	Maylandia_zebra
ENSSDUG00000021711	-	87	38.806	ENSNBRG00000009351	zgc:113625	52	38.806	Neolamprologus_brichardi
ENSSDUG00000021711	-	89	38.519	ENSNBRG00000009435	-	53	38.519	Neolamprologus_brichardi
ENSSDUG00000021711	-	87	39.394	ENSNBRG00000009301	zgc:113625	54	39.394	Neolamprologus_brichardi
ENSSDUG00000021711	-	87	40.000	ENSNBRG00000009377	zgc:113625	53	40.000	Neolamprologus_brichardi
ENSSDUG00000021711	-	85	39.535	ENSNBRG00000003525	-	52	39.535	Neolamprologus_brichardi
ENSSDUG00000021711	-	87	39.394	ENSNBRG00000009327	zgc:113625	55	39.394	Neolamprologus_brichardi
ENSSDUG00000021711	-	71	54.054	ENSNBRG00000024164	-	85	54.054	Neolamprologus_brichardi
ENSSDUG00000021711	-	70	48.387	ENSONIG00000011627	-	52	48.387	Oreochromis_niloticus
ENSSDUG00000021711	-	68	60.674	ENSONIG00000016464	-	52	60.674	Oreochromis_niloticus
ENSSDUG00000021711	-	81	40.984	ENSONIG00000016491	-	51	40.984	Oreochromis_niloticus
ENSSDUG00000021711	-	97	43.949	ENSONIG00000020206	-	56	43.949	Oreochromis_niloticus
ENSSDUG00000021711	-	84	39.370	ENSONIG00000018006	-	63	39.370	Oreochromis_niloticus
ENSSDUG00000021711	-	81	40.984	ENSONIG00000005032	zgc:113625	51	40.984	Oreochromis_niloticus
ENSSDUG00000021711	-	81	52.273	ENSONIG00000005035	-	51	41.803	Oreochromis_niloticus
ENSSDUG00000021711	-	81	37.705	ENSONIG00000020592	zgc:113625	51	37.705	Oreochromis_niloticus
ENSSDUG00000021711	-	87	40.152	ENSPKIG00000013970	-	50	40.152	Paramormyrops_kingsleyae
ENSSDUG00000021711	-	58	56.818	ENSPKIG00000017979	-	54	56.818	Paramormyrops_kingsleyae
ENSSDUG00000021711	-	58	51.136	ENSPLAG00000017588	-	53	51.136	Poecilia_latipinna
ENSSDUG00000021711	-	58	58.621	ENSPLAG00000017599	-	61	59.091	Poecilia_latipinna
ENSSDUG00000021711	-	58	51.136	ENSPMEG00000019918	-	53	51.136	Poecilia_mexicana
ENSSDUG00000021711	-	76	45.455	ENSPREG00000000360	-	53	45.455	Poecilia_reticulata
ENSSDUG00000021711	-	87	37.879	ENSPNYG00000023896	-	53	37.879	Pundamilia_nyererei
ENSSDUG00000021711	-	81	40.164	ENSPNYG00000005249	-	51	40.164	Pundamilia_nyererei
ENSSDUG00000021711	-	71	54.630	ENSPNYG00000004891	-	50	54.630	Pundamilia_nyererei
ENSSDUG00000021711	-	85	37.984	ENSPNYG00000014779	-	51	37.984	Pundamilia_nyererei
ENSSDUG00000021711	-	81	40.984	ENSPNYG00000005351	-	51	40.984	Pundamilia_nyererei
ENSSDUG00000021711	-	86	37.692	ENSPNAG00000014086	zgc:153642	53	37.692	Pygocentrus_nattereri
ENSSDUG00000021711	-	84	39.370	ENSPNAG00000020877	zgc:113625	51	39.370	Pygocentrus_nattereri
ENSSDUG00000021711	-	60	41.758	ENSPNAG00000015718	-	59	41.758	Pygocentrus_nattereri
ENSSDUG00000021711	-	58	54.545	ENSPNAG00000014098	-	62	54.545	Pygocentrus_nattereri
ENSSDUG00000021711	-	58	50.000	ENSPNAG00000014125	-	50	50.000	Pygocentrus_nattereri
ENSSDUG00000021711	-	93	70.213	ENSSMAG00000012655	-	52	70.213	Scophthalmus_maximus
ENSSDUG00000021711	-	59	52.222	ENSSLDG00000009698	-	72	52.222	Seriola_lalandi_dorsalis
ENSSDUG00000021711	-	81	39.683	ENSSLDG00000008228	-	52	39.683	Seriola_lalandi_dorsalis
ENSSDUG00000021711	-	59	52.222	ENSSLDG00000013130	-	69	52.222	Seriola_lalandi_dorsalis
ENSSDUG00000021711	-	59	49.438	ENSSPAG00000015591	-	56	49.438	Stegastes_partitus
ENSSDUG00000021711	-	59	49.438	ENSSPAG00000015600	-	51	49.438	Stegastes_partitus
ENSSDUG00000021711	-	62	55.319	ENSXCOG00000018333	-	65	55.319	Xiphophorus_couchianus
ENSSDUG00000021711	-	59	52.222	ENSXCOG00000014519	-	63	52.222	Xiphophorus_couchianus
ENSSDUG00000021711	-	61	56.522	ENSXMAG00000026760	-	50	56.522	Xiphophorus_maculatus
ENSSDUG00000021711	-	84	38.583	ENSXMAG00000023591	-	51	38.583	Xiphophorus_maculatus