EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000021722 (Gene tree)
Gene ID: -
Gene Symbol: mrps28
Alias: zgc:152965
Full Name: mitochondrial ribosomal protein S28
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 1053 bases
Position: chrBDQW01001001.1:294875-295927
Accession: ZDB-GENE-061110-52
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030137	MRP-S35	PF10246.9	2.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000030653	-	543	-	ENSSDUP00000030137	180 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000021722's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000021722's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000021722	mrps28	100	54.167	ENSSDUG00000021762	-	100	54.124

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000021722	mrps28	91	54.268	ENSG00000147586	MRPS28	91	72.340	Homo_sapiens
ENSSDUG00000021722	mrps28	55	70.707	ENSAMEG00000017516	MRPS28	86	70.707	Ailuropoda_melanoleuca
ENSSDUG00000021722	mrps28	76	80.147	ENSACIG00000007839	mrps28	80	79.286	Amphilophus_citrinellus
ENSSDUG00000021722	mrps28	76	79.412	ENSAOCG00000000705	mrps28	80	78.986	Amphiprion_ocellaris
ENSSDUG00000021722	mrps28	76	79.412	ENSAPEG00000016051	mrps28	80	78.986	Amphiprion_percula
ENSSDUG00000021722	mrps28	79	77.622	ENSATEG00000015295	mrps28	79	77.083	Anabas_testudineus
ENSSDUG00000021722	mrps28	55	72.727	ENSAPLG00000005666	MRPS28	93	72.727	Anas_platyrhynchos
ENSSDUG00000021722	mrps28	54	79.592	ENSACLG00000003892	mrps28	84	79.592	Astatotilapia_calliptera
ENSSDUG00000021722	mrps28	91	59.281	ENSAMXG00000026324	mrps28	87	57.831	Astyanax_mexicanus
ENSSDUG00000021722	mrps28	92	57.396	ENSBTAG00000001302	MRPS28	87	57.485	Bos_taurus
ENSSDUG00000021722	mrps28	55	50.505	WBGene00012830	mrps-28	55	51.579	Caenorhabditis_elegans
ENSSDUG00000021722	mrps28	78	60.714	ENSCAFG00000008393	MRPS28	93	54.335	Canis_familiaris
ENSSDUG00000021722	mrps28	78	60.714	ENSCAFG00020017987	MRPS28	93	54.335	Canis_lupus_dingo
ENSSDUG00000021722	mrps28	93	56.471	ENSCHIG00000018727	MRPS28	89	56.471	Capra_hircus
ENSSDUG00000021722	mrps28	54	53.535	ENSTSYG00000013531	-	74	52.525	Carlito_syrichta
ENSSDUG00000021722	mrps28	79	53.472	ENSTSYG00000031343	-	76	52.778	Carlito_syrichta
ENSSDUG00000021722	mrps28	52	69.149	ENSCAPG00000006948	-	85	69.149	Cavia_aperea
ENSSDUG00000021722	mrps28	52	69.149	ENSCPOG00000031885	-	85	69.149	Cavia_porcellus
ENSSDUG00000021722	mrps28	72	60.769	ENSCCAG00000022534	MRPS28	70	71.765	Cebus_capucinus
ENSSDUG00000021722	mrps28	53	71.579	ENSCLAG00000003227	-	86	71.579	Chinchilla_lanigera
ENSSDUG00000021722	mrps28	72	62.121	ENSCHOG00000004885	MRPS28	76	57.823	Choloepus_hoffmanni
ENSSDUG00000021722	mrps28	62	72.072	ENSCPBG00000007206	MRPS28	50	77.778	Chrysemys_picta_bellii
ENSSDUG00000021722	mrps28	91	59.639	ENSCGRG00001018741	Mrps28	85	59.036	Cricetulus_griseus_chok1gshd
ENSSDUG00000021722	mrps28	55	73.737	ENSCGRG00000018208	Mrps28	85	73.737	Cricetulus_griseus_crigri
ENSSDUG00000021722	mrps28	54	80.412	ENSCSEG00000020947	mrps28	92	80.412	Cynoglossus_semilaevis
ENSSDUG00000021722	mrps28	61	68.182	ENSCVAG00000007159	mrps28	80	72.727	Cyprinodon_variegatus
ENSSDUG00000021722	mrps28	93	56.977	ENSDARG00000041538	mrps28	93	55.556	Danio_rerio
ENSSDUG00000021722	mrps28	75	62.222	ENSDNOG00000017379	-	51	56.173	Dasypus_novemcinctus
ENSSDUG00000021722	mrps28	74	64.179	ENSDORG00000002762	Mrps28	80	58.333	Dipodomys_ordii
ENSSDUG00000021722	mrps28	82	46.622	FBgn0034361	mRpS28	66	45.946	Drosophila_melanogaster
ENSSDUG00000021722	mrps28	70	60.317	ENSEBUG00000010846	mrps28	78	53.191	Eptatretus_burgeri
ENSSDUG00000021722	mrps28	80	62.838	ENSEASG00005020574	MRPS28	77	62.838	Equus_asinus_asinus
ENSSDUG00000021722	mrps28	80	62.838	ENSECAG00000015430	MRPS28	77	62.838	Equus_caballus
ENSSDUG00000021722	mrps28	57	57.547	ENSECAG00000030797	-	63	57.547	Equus_caballus
ENSSDUG00000021722	mrps28	56	58.095	ENSECAG00000036837	-	60	58.095	Equus_caballus
ENSSDUG00000021722	mrps28	83	37.086	ENSEEUG00000013471	MRPS28	80	36.424	Erinaceus_europaeus
ENSSDUG00000021722	mrps28	52	48.421	ENSELUG00000023151	mrps28	64	48.421	Esox_lucius
ENSSDUG00000021722	mrps28	76	61.871	ENSFCAG00000032510	MRPS28	77	59.864	Felis_catus
ENSSDUG00000021722	mrps28	64	67.500	ENSFALG00000008608	MRPS28	77	73.267	Ficedula_albicollis
ENSSDUG00000021722	mrps28	72	62.595	ENSFDAG00000013634	MRPS28	74	57.823	Fukomys_damarensis
ENSSDUG00000021722	mrps28	55	76.768	ENSFHEG00000006233	mrps28	73	77.551	Fundulus_heteroclitus
ENSSDUG00000021722	mrps28	68	68.852	ENSGAFG00000014759	mrps28	73	65.714	Gambusia_affinis
ENSSDUG00000021722	mrps28	81	77.931	ENSGACG00000019939	mrps28	83	73.885	Gasterosteus_aculeatus
ENSSDUG00000021722	mrps28	55	76.768	ENSGAGG00000025904	MRPS28	58	76.768	Gopherus_agassizii
ENSSDUG00000021722	mrps28	54	79.592	ENSHBUG00000014315	mrps28	84	79.592	Haplochromis_burtoni
ENSSDUG00000021722	mrps28	73	64.662	ENSHGLG00000009986	MRPS28	61	60.274	Heterocephalus_glaber_female
ENSSDUG00000021722	mrps28	73	64.662	ENSHGLG00100019258	MRPS28	61	60.274	Heterocephalus_glaber_male
ENSSDUG00000021722	mrps28	76	63.043	ENSHCOG00000011561	mrps28	77	63.768	Hippocampus_comes
ENSSDUG00000021722	mrps28	80	62.069	ENSIPUG00000012566	mrps28	77	62.069	Ictalurus_punctatus
ENSSDUG00000021722	mrps28	76	80.882	ENSKMAG00000006636	mrps28	73	80.882	Kryptolebias_marmoratus
ENSSDUG00000021722	mrps28	82	61.224	ENSLACG00000014702	MRPS28	75	60.544	Latimeria_chalumnae
ENSSDUG00000021722	mrps28	91	61.585	ENSLOCG00000017359	mrps28	84	60.123	Lepisosteus_oculatus
ENSSDUG00000021722	mrps28	54	87.629	ENSMAMG00000017782	mrps28	83	87.629	Mastacembelus_armatus
ENSSDUG00000021722	mrps28	55	78.788	ENSMZEG00005010529	-	84	79.592	Maylandia_zebra
ENSSDUG00000021722	mrps28	54	79.592	ENSMZEG00005014997	mrps28	84	79.592	Maylandia_zebra
ENSSDUG00000021722	mrps28	55	75.758	ENSMGAG00000011622	MRPS28	95	75.758	Meleagris_gallopavo
ENSSDUG00000021722	mrps28	83	60.927	ENSMAUG00000009465	Mrps28	78	60.927	Mesocricetus_auratus
ENSSDUG00000021722	mrps28	89	57.927	ENSMICG00000044873	MRPS28	84	57.055	Microcebus_murinus
ENSSDUG00000021722	mrps28	83	64.238	ENSMOCG00000021930	Mrps28	78	62.252	Microtus_ochrogaster
ENSSDUG00000021722	mrps28	88	56.790	ENSMODG00000006621	MRPS28	83	56.790	Monodelphis_domestica
ENSSDUG00000021722	mrps28	59	81.132	ENSMALG00000006494	mrps28	76	83.168	Monopterus_albus
ENSSDUG00000021722	mrps28	92	56.287	MGP_CAROLIEiJ_G0024833	Mrps28	87	56.287	Mus_caroli
ENSSDUG00000021722	mrps28	92	55.689	ENSMUSG00000040269	Mrps28	87	55.689	Mus_musculus
ENSSDUG00000021722	mrps28	72	63.077	MGP_PahariEiJ_G0026281	Mrps28	78	56.954	Mus_pahari
ENSSDUG00000021722	mrps28	92	55.689	MGP_SPRETEiJ_G0025763	Mrps28	87	55.689	Mus_spretus
ENSSDUG00000021722	mrps28	72	63.846	ENSMPUG00000001853	MRPS28	77	58.503	Mustela_putorius_furo
ENSSDUG00000021722	mrps28	75	65.441	ENSMLUG00000015175	MRPS28	89	57.647	Myotis_lucifugus
ENSSDUG00000021722	mrps28	77	62.319	ENSNGAG00000000216	Mrps28	85	54.878	Nannospalax_galili
ENSSDUG00000021722	mrps28	87	65.605	ENSNBRG00000021393	mrps28	86	65.605	Neolamprologus_brichardi
ENSSDUG00000021722	mrps28	72	66.412	ENSMEUG00000007676	MRPS28	69	64.615	Notamacropus_eugenii
ENSSDUG00000021722	mrps28	93	58.235	ENSODEG00000005701	MRPS28	88	57.647	Octodon_degus
ENSSDUG00000021722	mrps28	78	72.143	ENSONIG00000020758	mrps28	80	72.143	Oreochromis_niloticus
ENSSDUG00000021722	mrps28	69	68.000	ENSOCUG00000000867	MRPS28	87	59.006	Oryctolagus_cuniculus
ENSSDUG00000021722	mrps28	76	77.698	ENSORLG00000026843	mrps28	78	75.540	Oryzias_latipes
ENSSDUG00000021722	mrps28	76	78.417	ENSORLG00020022089	mrps28	79	76.259	Oryzias_latipes_hni
ENSSDUG00000021722	mrps28	74	72.388	ENSOMEG00000008250	mrps28	74	71.429	Oryzias_melastigma
ENSSDUG00000021722	mrps28	73	63.636	ENSOGAG00000016599	MRPS28	88	53.216	Otolemur_garnettii
ENSSDUG00000021722	mrps28	76	61.871	ENSPPRG00000009220	MRPS28	77	59.864	Panthera_pardus
ENSSDUG00000021722	mrps28	76	61.871	ENSPTIG00000019934	MRPS28	77	59.864	Panthera_tigris_altaica
ENSSDUG00000021722	mrps28	55	71.717	ENSPKIG00000022304	mrps28	79	71.717	Paramormyrops_kingsleyae
ENSSDUG00000021722	mrps28	96	56.395	ENSPMGG00000008007	-	94	56.395	Periophthalmus_magnuspinnatus
ENSSDUG00000021722	mrps28	83	63.576	ENSPEMG00000012338	Mrps28	78	61.589	Peromyscus_maniculatus_bairdii
ENSSDUG00000021722	mrps28	55	73.737	ENSPMAG00000002015	mrps28	88	73.737	Petromyzon_marinus
ENSSDUG00000021722	mrps28	81	61.589	ENSPCIG00000026795	MRPS28	79	61.589	Phascolarctos_cinereus
ENSSDUG00000021722	mrps28	68	68.033	ENSPFOG00000020828	mrps28	77	65.000	Poecilia_formosa
ENSSDUG00000021722	mrps28	68	68.033	ENSPLAG00000005387	mrps28	77	65.000	Poecilia_latipinna
ENSSDUG00000021722	mrps28	65	69.231	ENSPMEG00000022332	mrps28	78	65.926	Poecilia_mexicana
ENSSDUG00000021722	mrps28	78	67.143	ENSPREG00000005690	mrps28	78	67.143	Poecilia_reticulata
ENSSDUG00000021722	mrps28	72	65.385	ENSPPYG00000018694	MRPS28	87	56.213	Pongo_abelii
ENSSDUG00000021722	mrps28	56	71.000	ENSPCAG00000000404	MRPS28	86	71.000	Procavia_capensis
ENSSDUG00000021722	mrps28	74	64.179	ENSPCOG00000003866	MRPS28	84	57.927	Propithecus_coquereli
ENSSDUG00000021722	mrps28	76	62.044	ENSPVAG00000007815	MRPS28	78	58.278	Pteropus_vampyrus
ENSSDUG00000021722	mrps28	55	78.788	ENSPNYG00000016499	mrps28	84	79.592	Pundamilia_nyererei
ENSSDUG00000021722	mrps28	84	59.375	ENSPNAG00000018621	mrps28	86	59.375	Pygocentrus_nattereri
ENSSDUG00000021722	mrps28	93	57.059	ENSRNOG00000032630	Mrps28	88	57.059	Rattus_norvegicus
ENSSDUG00000021722	mrps28	72	62.308	ENSSBOG00000028198	MRPS28	69	71.765	Saimiri_boliviensis_boliviensis
ENSSDUG00000021722	mrps28	84	57.862	ENSSFOG00015004723	mrps28	76	55.975	Scleropages_formosus
ENSSDUG00000021722	mrps28	77	81.295	ENSSMAG00000021042	mrps28	84	81.379	Scophthalmus_maximus
ENSSDUG00000021722	mrps28	75	97.037	ENSSLDG00000013261	mrps28	77	95.105	Seriola_lalandi_dorsalis
ENSSDUG00000021722	mrps28	73	67.176	ENSSARG00000007429	MRPS28	83	58.385	Sorex_araneus
ENSSDUG00000021722	mrps28	55	71.717	ENSSPUG00000017502	MRPS28	59	71.717	Sphenodon_punctatus
ENSSDUG00000021722	mrps28	76	77.206	ENSSPAG00000003194	mrps28	79	76.812	Stegastes_partitus
ENSSDUG00000021722	mrps28	76	62.044	ENSSSCG00000037782	MRPS28	78	59.603	Sus_scrofa
ENSSDUG00000021722	mrps28	77	72.662	ENSTRUG00000012758	mrps28	75	72.662	Takifugu_rubripes
ENSSDUG00000021722	mrps28	76	58.394	ENSTBEG00000010380	MRPS28	86	52.663	Tupaia_belangeri
ENSSDUG00000021722	mrps28	98	52.542	ENSTTRG00000000087	MRPS28	91	51.955	Tursiops_truncatus
ENSSDUG00000021722	mrps28	72	63.846	ENSUAMG00000018127	MRPS28	77	59.184	Ursus_americanus
ENSSDUG00000021722	mrps28	72	63.846	ENSUMAG00000014927	MRPS28	77	59.184	Ursus_maritimus
ENSSDUG00000021722	mrps28	82	60.265	ENSVPAG00000000652	MRPS28	88	54.386	Vicugna_pacos
ENSSDUG00000021722	mrps28	78	60.714	ENSVVUG00000000384	MRPS28	93	55.491	Vulpes_vulpes
ENSSDUG00000021722	mrps28	65	69.231	ENSXCOG00000015251	mrps28	69	65.926	Xiphophorus_couchianus