EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000021791 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 1057 bases
Position: chrBDQW01000665.1:787389-788445
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030247	RVT_1	PF00078.27	2.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000030770	-	1057	-	ENSSDUP00000030247	300 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000021791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000021791's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000021791	-	81	33.469	ENSSDUG00000017945	-	68	33.469
ENSSDUG00000021791	-	59	30.435	ENSSDUG00000000707	-	56	30.435
ENSSDUG00000021791	-	89	35.075	ENSSDUG00000015364	-	58	35.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000021791	-	82	44.534	ENSAPOG00000001366	-	69	44.534	Acanthochromis_polyacanthus
ENSSDUG00000021791	-	94	40.636	ENSAPOG00000014771	-	70	40.636	Acanthochromis_polyacanthus
ENSSDUG00000021791	-	90	44.649	ENSAPOG00000015742	-	85	44.649	Acanthochromis_polyacanthus
ENSSDUG00000021791	-	86	34.363	ENSACIG00000020856	-	56	34.363	Amphilophus_citrinellus
ENSSDUG00000021791	-	78	35.043	ENSACIG00000020849	-	61	35.043	Amphilophus_citrinellus
ENSSDUG00000021791	-	99	38.591	ENSACIG00000010538	-	77	38.591	Amphilophus_citrinellus
ENSSDUG00000021791	-	100	38.333	ENSAOCG00000012592	-	63	38.333	Amphiprion_ocellaris
ENSSDUG00000021791	-	100	52.333	ENSAOCG00000000894	-	90	52.333	Amphiprion_ocellaris
ENSSDUG00000021791	-	99	48.322	ENSAOCG00000014605	-	58	48.322	Amphiprion_ocellaris
ENSSDUG00000021791	-	99	44.108	ENSAOCG00000019069	-	81	44.108	Amphiprion_ocellaris
ENSSDUG00000021791	-	83	35.200	ENSATEG00000019721	-	65	35.200	Anabas_testudineus
ENSSDUG00000021791	-	87	38.077	ENSACAG00000010816	-	73	38.077	Anolis_carolinensis
ENSSDUG00000021791	-	54	41.358	ENSACLG00000012084	-	93	41.358	Astatotilapia_calliptera
ENSSDUG00000021791	-	91	34.182	ENSACLG00000011319	-	72	34.182	Astatotilapia_calliptera
ENSSDUG00000021791	-	93	50.000	ENSACLG00000012857	-	76	50.000	Astatotilapia_calliptera
ENSSDUG00000021791	-	78	50.000	ENSACLG00000010837	-	58	50.000	Astatotilapia_calliptera
ENSSDUG00000021791	-	99	49.832	ENSACLG00000013571	-	73	49.832	Astatotilapia_calliptera
ENSSDUG00000021791	-	88	62.500	ENSAMXG00000041014	-	100	62.500	Astyanax_mexicanus
ENSSDUG00000021791	-	88	46.591	ENSAMXG00000040763	-	67	46.591	Astyanax_mexicanus
ENSSDUG00000021791	-	94	33.101	ENSAMXG00000035718	-	54	33.101	Astyanax_mexicanus
ENSSDUG00000021791	-	69	41.063	ENSCPBG00000017828	-	56	41.063	Chrysemys_picta_bellii
ENSSDUG00000021791	-	99	47.475	ENSCVAG00000018360	-	72	47.475	Cyprinodon_variegatus
ENSSDUG00000021791	-	98	35.495	ENSCVAG00000020933	-	64	35.495	Cyprinodon_variegatus
ENSSDUG00000021791	-	82	33.333	ENSELUG00000000386	-	55	33.333	Esox_lucius
ENSSDUG00000021791	-	99	35.017	ENSELUG00000014378	-	69	35.017	Esox_lucius
ENSSDUG00000021791	-	91	36.861	ENSGAGG00000013921	-	73	36.861	Gopherus_agassizii
ENSSDUG00000021791	-	78	30.213	ENSHBUG00000003796	-	54	30.213	Haplochromis_burtoni
ENSSDUG00000021791	-	89	32.841	ENSHBUG00000011715	-	67	32.841	Haplochromis_burtoni
ENSSDUG00000021791	-	100	47.333	ENSHBUG00000007736	-	72	47.492	Haplochromis_burtoni
ENSSDUG00000021791	-	70	35.047	ENSIPUG00000010242	-	57	35.047	Ictalurus_punctatus
ENSSDUG00000021791	-	99	46.309	ENSKMAG00000014393	-	70	46.309	Kryptolebias_marmoratus
ENSSDUG00000021791	-	96	45.017	ENSLBEG00000004148	-	61	45.017	Labrus_bergylta
ENSSDUG00000021791	-	52	41.667	ENSLBEG00000003356	-	91	41.667	Labrus_bergylta
ENSSDUG00000021791	-	99	41.216	ENSLBEG00000020242	-	81	41.216	Labrus_bergylta
ENSSDUG00000021791	-	99	39.597	ENSLBEG00000023714	-	79	39.597	Labrus_bergylta
ENSSDUG00000021791	-	52	50.323	ENSMZEG00005008352	-	93	50.323	Maylandia_zebra
ENSSDUG00000021791	-	91	34.182	ENSMZEG00005025877	-	64	34.182	Maylandia_zebra
ENSSDUG00000021791	-	99	47.811	ENSMZEG00005017030	-	56	47.811	Maylandia_zebra
ENSSDUG00000021791	-	99	47.811	ENSMZEG00005011529	-	56	47.811	Maylandia_zebra
ENSSDUG00000021791	-	95	48.944	ENSMZEG00005016362	-	100	48.944	Maylandia_zebra
ENSSDUG00000021791	-	73	51.364	ENSMZEG00005006211	-	54	51.364	Maylandia_zebra
ENSSDUG00000021791	-	91	34.182	ENSMZEG00005008304	-	64	34.182	Maylandia_zebra
ENSSDUG00000021791	-	54	40.741	ENSMZEG00005026872	-	96	40.741	Maylandia_zebra
ENSSDUG00000021791	-	99	45.819	ENSNBRG00000000972	-	73	45.819	Neolamprologus_brichardi
ENSSDUG00000021791	-	86	34.615	ENSNBRG00000001934	-	56	34.483	Neolamprologus_brichardi
ENSSDUG00000021791	-	81	42.213	ENSNBRG00000013792	-	71	42.213	Neolamprologus_brichardi
ENSSDUG00000021791	-	64	44.503	ENSNBRG00000003891	-	95	44.503	Neolamprologus_brichardi
ENSSDUG00000021791	-	84	33.333	ENSNBRG00000022130	-	60	33.333	Neolamprologus_brichardi
ENSSDUG00000021791	-	99	49.495	ENSNBRG00000012595	-	68	49.495	Neolamprologus_brichardi
ENSSDUG00000021791	-	93	48.746	ENSORLG00000024236	-	73	48.746	Oryzias_latipes
ENSSDUG00000021791	-	77	51.304	ENSORLG00000028976	-	60	51.304	Oryzias_latipes
ENSSDUG00000021791	-	88	52.273	ENSORLG00000028706	-	53	52.273	Oryzias_latipes
ENSSDUG00000021791	-	99	47.811	ENSORLG00000023713	-	76	47.811	Oryzias_latipes
ENSSDUG00000021791	-	94	46.099	ENSORLG00000028454	-	89	46.099	Oryzias_latipes
ENSSDUG00000021791	-	79	48.729	ENSORLG00020022004	-	81	48.729	Oryzias_latipes_hni
ENSSDUG00000021791	-	85	52.756	ENSORLG00020007002	-	100	52.756	Oryzias_latipes_hni
ENSSDUG00000021791	-	88	48.872	ENSORLG00020018629	-	71	48.872	Oryzias_latipes_hni
ENSSDUG00000021791	-	88	34.221	ENSORLG00020004063	-	77	34.221	Oryzias_latipes_hni
ENSSDUG00000021791	-	99	45.973	ENSORLG00020014626	-	55	45.973	Oryzias_latipes_hni
ENSSDUG00000021791	-	88	48.496	ENSORLG00020007779	-	72	48.496	Oryzias_latipes_hni
ENSSDUG00000021791	-	93	48.561	ENSORLG00020014149	-	86	48.561	Oryzias_latipes_hni
ENSSDUG00000021791	-	98	40.136	ENSORLG00015020895	-	78	40.136	Oryzias_latipes_hsok
ENSSDUG00000021791	-	71	41.509	ENSORLG00015008227	-	59	41.509	Oryzias_latipes_hsok
ENSSDUG00000021791	-	96	45.608	ENSORLG00015021206	-	58	45.608	Oryzias_latipes_hsok
ENSSDUG00000021791	-	82	50.806	ENSORLG00015000419	-	70	50.806	Oryzias_latipes_hsok
ENSSDUG00000021791	-	73	40.909	ENSORLG00015021848	-	73	40.909	Oryzias_latipes_hsok
ENSSDUG00000021791	-	87	47.692	ENSORLG00015022393	-	87	47.692	Oryzias_latipes_hsok
ENSSDUG00000021791	-	88	48.872	ENSORLG00015007703	-	69	48.872	Oryzias_latipes_hsok
ENSSDUG00000021791	-	89	37.687	ENSOMEG00000013211	-	63	37.687	Oryzias_melastigma
ENSSDUG00000021791	-	79	48.117	ENSPKIG00000013511	-	81	48.117	Paramormyrops_kingsleyae
ENSSDUG00000021791	-	60	46.296	ENSPKIG00000024018	-	66	46.296	Paramormyrops_kingsleyae
ENSSDUG00000021791	-	77	38.696	ENSPMGG00000014421	-	56	38.696	Periophthalmus_magnuspinnatus
ENSSDUG00000021791	-	51	35.065	ENSPLAG00000014463	-	96	35.065	Poecilia_latipinna
ENSSDUG00000021791	-	94	35.315	ENSPLAG00000015080	-	67	35.315	Poecilia_latipinna
ENSSDUG00000021791	-	75	32.895	ENSPMEG00000004673	-	55	32.895	Poecilia_mexicana
ENSSDUG00000021791	-	99	43.434	ENSPREG00000006501	-	52	43.434	Poecilia_reticulata
ENSSDUG00000021791	-	98	34.783	ENSPREG00000004933	-	74	34.783	Poecilia_reticulata
ENSSDUG00000021791	-	99	39.865	ENSPREG00000001352	-	83	39.865	Poecilia_reticulata
ENSSDUG00000021791	-	97	38.305	ENSPREG00000010319	-	70	38.305	Poecilia_reticulata
ENSSDUG00000021791	-	89	33.824	ENSPNYG00000002652	-	70	33.824	Pundamilia_nyererei
ENSSDUG00000021791	-	100	44.000	ENSPNYG00000002466	-	99	44.000	Pundamilia_nyererei
ENSSDUG00000021791	-	89	39.925	ENSPNYG00000023697	-	62	39.925	Pundamilia_nyererei
ENSSDUG00000021791	-	98	46.441	ENSPNAG00000010342	-	94	46.441	Pygocentrus_nattereri
ENSSDUG00000021791	-	99	51.007	ENSPNAG00000002786	-	73	51.007	Pygocentrus_nattereri
ENSSDUG00000021791	-	88	36.704	ENSPNAG00000024211	-	54	36.704	Pygocentrus_nattereri
ENSSDUG00000021791	-	99	40.404	ENSPNAG00000024749	-	70	40.404	Pygocentrus_nattereri
ENSSDUG00000021791	-	88	60.985	ENSPNAG00000014375	-	64	60.985	Pygocentrus_nattereri
ENSSDUG00000021791	-	97	44.521	ENSSMAG00000014015	-	64	44.521	Scophthalmus_maximus
ENSSDUG00000021791	-	99	40.741	ENSSLDG00000006955	-	69	40.741	Seriola_lalandi_dorsalis
ENSSDUG00000021791	-	99	42.617	ENSSPUG00000015446	-	67	42.617	Sphenodon_punctatus
ENSSDUG00000021791	-	99	48.993	ENSSPAG00000000151	-	65	48.993	Stegastes_partitus
ENSSDUG00000021791	-	98	34.459	ENSSPAG00000012089	-	79	34.459	Stegastes_partitus
ENSSDUG00000021791	-	96	37.500	ENSXCOG00000016894	-	85	37.500	Xiphophorus_couchianus
ENSSDUG00000021791	-	92	33.094	ENSXMAG00000023211	-	61	33.094	Xiphophorus_maculatus
ENSSDUG00000021791	-	87	57.088	ENSXMAG00000026184	-	87	57.088	Xiphophorus_maculatus