EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000021807 (Gene tree)
Gene ID: 111227527
Gene Symbol: trmt1l
Alias: im:7142104|si:dkeyp-11g8.5
Full Name: tRNA methyltransferase 1 like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 11715 bases
Position: chrBDQW01000189.1:1768224-1779938
Accession: 111227527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030291	TRM	PF02005.16	1.8e-69	1	2
ENSSDUP00000030291	TRM	PF02005.16	1.8e-69	2	2
ENSSDUP00000030269	TRM	PF02005.16	4.1e-69	1	2
ENSSDUP00000030269	TRM	PF02005.16	4.1e-69	2	2
ENSSDUP00000030264	TRM	PF02005.16	6.3e-69	1	2
ENSSDUP00000030264	TRM	PF02005.16	6.3e-69	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000030788	-	3540	XM_022753058	ENSSDUP00000030264	672 (aa)	XP_022608779	UPI000BBF2705
ENSSDUT00000030793	-	3641	XM_022753059	ENSSDUP00000030269	606 (aa)	XP_022608780	UPI000BBE3D71
ENSSDUT00000030815	-	1809	-	ENSSDUP00000030291	602 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000021807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000021807's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000021807	trmt1l	99	63.339	ENSG00000121486	TRMT1L	99	70.952	Homo_sapiens
ENSSDUG00000021807	trmt1l	99	93.092	ENSAPOG00000011807	trmt1l	99	89.676	Acanthochromis_polyacanthus
ENSSDUG00000021807	trmt1l	97	64.587	ENSAMEG00000013538	TRMT1L	88	60.916	Ailuropoda_melanoleuca
ENSSDUG00000021807	trmt1l	80	87.885	ENSACIG00000012049	trmt1l	95	87.885	Amphilophus_citrinellus
ENSSDUG00000021807	trmt1l	99	92.434	ENSAOCG00000018112	trmt1l	99	89.086	Amphiprion_ocellaris
ENSSDUG00000021807	trmt1l	99	92.270	ENSAPEG00000021433	trmt1l	99	92.135	Amphiprion_percula
ENSSDUG00000021807	trmt1l	100	95.888	ENSATEG00000004573	trmt1l	100	95.888	Anabas_testudineus
ENSSDUG00000021807	trmt1l	96	67.517	ENSAPLG00000008394	TRMT1L	87	64.912	Anas_platyrhynchos
ENSSDUG00000021807	trmt1l	97	66.442	ENSACAG00000002342	TRMT1L	85	64.830	Anolis_carolinensis
ENSSDUG00000021807	trmt1l	97	65.320	ENSANAG00000038162	TRMT1L	88	61.585	Aotus_nancymaae
ENSSDUG00000021807	trmt1l	100	91.954	ENSACLG00000021625	trmt1l	100	89.926	Astatotilapia_calliptera
ENSSDUG00000021807	trmt1l	98	86.356	ENSAMXG00000009602	trmt1l	97	81.618	Astyanax_mexicanus
ENSSDUG00000021807	trmt1l	97	65.093	ENSBTAG00000011285	TRMT1L	87	61.503	Bos_taurus
ENSSDUG00000021807	trmt1l	97	65.261	ENSCJAG00000005456	TRMT1L	86	62.875	Callithrix_jacchus
ENSSDUG00000021807	trmt1l	97	64.924	ENSCAFG00000013518	TRMT1L	86	61.128	Canis_familiaris
ENSSDUG00000021807	trmt1l	97	64.924	ENSCAFG00020015640	TRMT1L	88	61.128	Canis_lupus_dingo
ENSSDUG00000021807	trmt1l	97	64.815	ENSCHIG00000016522	TRMT1L	84	62.600	Capra_hircus
ENSSDUG00000021807	trmt1l	97	64.983	ENSTSYG00000010465	TRMT1L	95	58.849	Carlito_syrichta
ENSSDUG00000021807	trmt1l	76	65.690	ENSCAPG00000012562	TRMT1L	75	65.966	Cavia_aperea
ENSSDUG00000021807	trmt1l	97	64.983	ENSCPOG00000001567	TRMT1L	91	60.597	Cavia_porcellus
ENSSDUG00000021807	trmt1l	97	64.815	ENSCCAG00000018699	TRMT1L	88	61.128	Cebus_capucinus
ENSSDUG00000021807	trmt1l	99	64.157	ENSCATG00000043114	TRMT1L	90	60.624	Cercocebus_atys
ENSSDUG00000021807	trmt1l	97	65.993	ENSCLAG00000010801	-	90	61.934	Chinchilla_lanigera
ENSSDUG00000021807	trmt1l	97	50.253	ENSCLAG00000010853	-	83	49.365	Chinchilla_lanigera
ENSSDUG00000021807	trmt1l	99	64.157	ENSCSAG00000012880	TRMT1L	90	60.624	Chlorocebus_sabaeus
ENSSDUG00000021807	trmt1l	56	69.262	ENSCHOG00000011164	TRMT1L	56	69.672	Choloepus_hoffmanni
ENSSDUG00000021807	trmt1l	97	68.866	ENSCPBG00000015694	TRMT1L	87	66.667	Chrysemys_picta_bellii
ENSSDUG00000021807	trmt1l	99	64.321	ENSCANG00000031107	TRMT1L	90	60.773	Colobus_angolensis_palliatus
ENSSDUG00000021807	trmt1l	96	64.676	ENSCGRG00001019297	Trmt1l	85	61.760	Cricetulus_griseus_chok1gshd
ENSSDUG00000021807	trmt1l	96	64.676	ENSCGRG00000005036	Trmt1l	85	61.760	Cricetulus_griseus_crigri
ENSSDUG00000021807	trmt1l	99	87.769	ENSCSEG00000001248	trmt1l	99	85.503	Cynoglossus_semilaevis
ENSSDUG00000021807	trmt1l	98	89.527	ENSCVAG00000012274	trmt1l	100	85.988	Cyprinodon_variegatus
ENSSDUG00000021807	trmt1l	99	85.314	ENSDARG00000042057	trmt1l	98	80.438	Danio_rerio
ENSSDUG00000021807	trmt1l	97	64.538	ENSDNOG00000005239	TRMT1L	85	62.303	Dasypus_novemcinctus
ENSSDUG00000021807	trmt1l	93	61.160	ENSDORG00000003298	Trmt1l	85	62.230	Dipodomys_ordii
ENSSDUG00000021807	trmt1l	74	71.739	ENSETEG00000015895	TRMT1L	70	68.443	Echinops_telfairi
ENSSDUG00000021807	trmt1l	97	47.333	ENSEBUG00000010301	trmt1l	93	47.333	Eptatretus_burgeri
ENSSDUG00000021807	trmt1l	97	62.353	ENSEASG00005005551	TRMT1L	87	58.752	Equus_asinus_asinus
ENSSDUG00000021807	trmt1l	97	64.815	ENSECAG00000020999	TRMT1L	83	60.976	Equus_caballus
ENSSDUG00000021807	trmt1l	88	66.055	ENSEEUG00000014110	TRMT1L	85	65.138	Erinaceus_europaeus
ENSSDUG00000021807	trmt1l	99	85.131	ENSELUG00000020587	trmt1l	99	81.844	Esox_lucius
ENSSDUG00000021807	trmt1l	97	64.824	ENSFCAG00000011285	TRMT1L	89	61.153	Felis_catus
ENSSDUG00000021807	trmt1l	97	66.667	ENSFALG00000003177	TRMT1L	95	64.388	Ficedula_albicollis
ENSSDUG00000021807	trmt1l	97	64.815	ENSFDAG00000008822	TRMT1L	90	61.002	Fukomys_damarensis
ENSSDUG00000021807	trmt1l	88	91.589	ENSFHEG00000014328	trmt1l	100	91.589	Fundulus_heteroclitus
ENSSDUG00000021807	trmt1l	98	84.370	ENSGMOG00000009535	trmt1l	97	84.426	Gadus_morhua
ENSSDUG00000021807	trmt1l	97	66.328	ENSGALG00000033077	TRMT1L	87	60.677	Gallus_gallus
ENSSDUG00000021807	trmt1l	100	88.689	ENSGAFG00000012445	trmt1l	100	86.451	Gambusia_affinis
ENSSDUG00000021807	trmt1l	99	88.871	ENSGACG00000005050	trmt1l	99	90.619	Gasterosteus_aculeatus
ENSSDUG00000021807	trmt1l	97	69.374	ENSGAGG00000007441	TRMT1L	82	66.930	Gopherus_agassizii
ENSSDUG00000021807	trmt1l	99	63.502	ENSGGOG00000011778	TRMT1L	88	61.128	Gorilla_gorilla
ENSSDUG00000021807	trmt1l	100	91.954	ENSHBUG00000000622	trmt1l	100	90.074	Haplochromis_burtoni
ENSSDUG00000021807	trmt1l	88	56.852	ENSHGLG00000012595	-	90	51.587	Heterocephalus_glaber_female
ENSSDUG00000021807	trmt1l	90	64.855	ENSHGLG00000003135	-	86	60.616	Heterocephalus_glaber_female
ENSSDUG00000021807	trmt1l	97	65.320	ENSHGLG00100019412	-	86	63.191	Heterocephalus_glaber_male
ENSSDUG00000021807	trmt1l	88	56.852	ENSHGLG00100004569	-	90	51.587	Heterocephalus_glaber_male
ENSSDUG00000021807	trmt1l	98	79.599	ENSIPUG00000008873	trmt1l	99	75.753	Ictalurus_punctatus
ENSSDUG00000021807	trmt1l	97	64.370	ENSSTOG00000010332	TRMT1L	90	60.483	Ictidomys_tridecemlineatus
ENSSDUG00000021807	trmt1l	97	64.250	ENSJJAG00000010929	Trmt1l	90	60.638	Jaculus_jaculus
ENSSDUG00000021807	trmt1l	99	84.793	ENSKMAG00000010310	trmt1l	94	84.277	Kryptolebias_marmoratus
ENSSDUG00000021807	trmt1l	100	91.447	ENSLBEG00000003487	trmt1l	100	89.528	Labrus_bergylta
ENSSDUG00000021807	trmt1l	90	92.701	ENSLBEG00000007982	-	100	90.453	Labrus_bergylta
ENSSDUG00000021807	trmt1l	99	68.831	ENSLACG00000008447	TRMT1L	96	65.658	Latimeria_chalumnae
ENSSDUG00000021807	trmt1l	99	83.250	ENSLOCG00000001781	trmt1l	98	77.599	Lepisosteus_oculatus
ENSSDUG00000021807	trmt1l	99	63.399	ENSLAFG00000004339	TRMT1L	91	59.941	Loxodonta_africana
ENSSDUG00000021807	trmt1l	99	64.157	ENSMFAG00000037592	TRMT1L	90	60.624	Macaca_fascicularis
ENSSDUG00000021807	trmt1l	99	64.157	ENSMMUG00000013879	TRMT1L	92	62.000	Macaca_mulatta
ENSSDUG00000021807	trmt1l	99	64.157	ENSMNEG00000041637	TRMT1L	90	60.624	Macaca_nemestrina
ENSSDUG00000021807	trmt1l	99	64.157	ENSMLEG00000004840	TRMT1L	87	62.000	Mandrillus_leucophaeus
ENSSDUG00000021807	trmt1l	98	90.525	ENSMAMG00000015305	trmt1l	99	86.454	Mastacembelus_armatus
ENSSDUG00000021807	trmt1l	100	92.118	ENSMZEG00005017822	trmt1l	100	90.074	Maylandia_zebra
ENSSDUG00000021807	trmt1l	97	66.779	ENSMGAG00000000930	TRMT1L	95	64.762	Meleagris_gallopavo
ENSSDUG00000021807	trmt1l	96	61.929	ENSMAUG00000019870	Trmt1l	87	59.248	Mesocricetus_auratus
ENSSDUG00000021807	trmt1l	97	65.488	ENSMICG00000009494	TRMT1L	88	61.585	Microcebus_murinus
ENSSDUG00000021807	trmt1l	97	63.406	ENSMOCG00000016453	Trmt1l	85	61.234	Microtus_ochrogaster
ENSSDUG00000021807	trmt1l	97	90.153	ENSMMOG00000016961	trmt1l	100	85.671	Mola_mola
ENSSDUG00000021807	trmt1l	98	68.624	ENSMODG00000007454	TRMT1L	74	65.084	Monodelphis_domestica
ENSSDUG00000021807	trmt1l	100	92.282	ENSMALG00000019306	trmt1l	99	90.399	Monopterus_albus
ENSSDUG00000021807	trmt1l	99	62.562	MGP_CAROLIEiJ_G0014693	Trmt1l	87	60.815	Mus_caroli
ENSSDUG00000021807	trmt1l	97	63.898	ENSMUSG00000053286	Trmt1l	87	60.625	Mus_musculus
ENSSDUG00000021807	trmt1l	96	64.055	MGP_PahariEiJ_G0027929	Trmt1l	89	60.182	Mus_pahari
ENSSDUG00000021807	trmt1l	77	71.739	MGP_SPRETEiJ_G0015500	Trmt1l	86	66.038	Mus_spretus
ENSSDUG00000021807	trmt1l	97	60.774	ENSMPUG00000011859	TRMT1L	93	55.716	Mustela_putorius_furo
ENSSDUG00000021807	trmt1l	97	65.767	ENSMLUG00000001136	TRMT1L	89	61.927	Myotis_lucifugus
ENSSDUG00000021807	trmt1l	97	64.250	ENSNGAG00000011685	Trmt1l	86	61.927	Nannospalax_galili
ENSSDUG00000021807	trmt1l	80	87.344	ENSNBRG00000004053	trmt1l	100	91.975	Neolamprologus_brichardi
ENSSDUG00000021807	trmt1l	99	64.157	ENSNLEG00000018030	TRMT1L	88	61.738	Nomascus_leucogenys
ENSSDUG00000021807	trmt1l	84	67.890	ENSMEUG00000011344	TRMT1L	80	68.182	Notamacropus_eugenii
ENSSDUG00000021807	trmt1l	90	63.521	ENSOPRG00000000680	TRMT1L	83	63.521	Ochotona_princeps
ENSSDUG00000021807	trmt1l	97	62.121	ENSODEG00000000826	TRMT1L	95	56.547	Octodon_degus
ENSSDUG00000021807	trmt1l	100	93.103	ENSONIG00000007823	trmt1l	100	90.815	Oreochromis_niloticus
ENSSDUG00000021807	trmt1l	98	66.611	ENSOANG00000001010	TRMT1L	95	64.557	Ornithorhynchus_anatinus
ENSSDUG00000021807	trmt1l	97	64.706	ENSOCUG00000004896	TRMT1L	88	62.696	Oryctolagus_cuniculus
ENSSDUG00000021807	trmt1l	97	92.177	ENSORLG00000029610	trmt1l	99	90.686	Oryzias_latipes
ENSSDUG00000021807	trmt1l	97	92.007	ENSORLG00020002203	trmt1l	99	87.758	Oryzias_latipes_hni
ENSSDUG00000021807	trmt1l	97	91.667	ENSORLG00015021512	trmt1l	99	87.316	Oryzias_latipes_hsok
ENSSDUG00000021807	trmt1l	92	95.652	ENSOMEG00000016275	trmt1l	87	95.652	Oryzias_melastigma
ENSSDUG00000021807	trmt1l	97	59.322	ENSOGAG00000016186	TRMT1L	95	58.920	Otolemur_garnettii
ENSSDUG00000021807	trmt1l	97	64.815	ENSOARG00000003786	TRMT1L	85	62.559	Ovis_aries
ENSSDUG00000021807	trmt1l	99	63.339	ENSPPAG00000029141	TRMT1L	88	60.976	Pan_paniscus
ENSSDUG00000021807	trmt1l	97	64.824	ENSPPRG00000023981	TRMT1L	89	61.339	Panthera_pardus
ENSSDUG00000021807	trmt1l	97	64.824	ENSPTIG00000021754	TRMT1L	89	61.153	Panthera_tigris_altaica
ENSSDUG00000021807	trmt1l	99	63.339	ENSPTRG00000001776	TRMT1L	88	60.976	Pan_troglodytes
ENSSDUG00000021807	trmt1l	99	62.193	ENSPANG00000020890	TRMT1L	90	58.692	Papio_anubis
ENSSDUG00000021807	trmt1l	98	84.385	ENSPKIG00000005941	trmt1l	98	79.708	Paramormyrops_kingsleyae
ENSSDUG00000021807	trmt1l	97	68.528	ENSPSIG00000010011	TRMT1L	91	66.454	Pelodiscus_sinensis
ENSSDUG00000021807	trmt1l	89	75.719	ENSPMGG00000021359	trmt1l	94	76.259	Periophthalmus_magnuspinnatus
ENSSDUG00000021807	trmt1l	99	63.054	ENSPEMG00000000031	Trmt1l	90	60.182	Peromyscus_maniculatus_bairdii
ENSSDUG00000021807	trmt1l	97	58.416	ENSPMAG00000005838	trmt1l	100	57.500	Petromyzon_marinus
ENSSDUG00000021807	trmt1l	97	68.855	ENSPCIG00000002409	TRMT1L	86	65.084	Phascolarctos_cinereus
ENSSDUG00000021807	trmt1l	100	89.984	ENSPFOG00000003872	trmt1l	100	87.611	Poecilia_formosa
ENSSDUG00000021807	trmt1l	100	89.984	ENSPLAG00000010387	trmt1l	100	87.611	Poecilia_latipinna
ENSSDUG00000021807	trmt1l	100	90.148	ENSPMEG00000011828	trmt1l	100	90.148	Poecilia_mexicana
ENSSDUG00000021807	trmt1l	100	89.819	ENSPREG00000002866	trmt1l	100	87.758	Poecilia_reticulata
ENSSDUG00000021807	trmt1l	99	63.502	ENSPPYG00000000416	TRMT1L	88	61.128	Pongo_abelii
ENSSDUG00000021807	trmt1l	87	65.421	ENSPCAG00000008257	TRMT1L	77	72.727	Procavia_capensis
ENSSDUG00000021807	trmt1l	81	59.146	ENSPCOG00000005682	TRMT1L	86	43.884	Propithecus_coquereli
ENSSDUG00000021807	trmt1l	83	70.312	ENSPVAG00000005961	TRMT1L	74	66.817	Pteropus_vampyrus
ENSSDUG00000021807	trmt1l	100	87.765	ENSPNYG00000005607	trmt1l	100	87.702	Pundamilia_nyererei
ENSSDUG00000021807	trmt1l	98	85.191	ENSPNAG00000004389	trmt1l	97	80.265	Pygocentrus_nattereri
ENSSDUG00000021807	trmt1l	96	64.286	ENSRNOG00000002580	Trmt1l	86	61.867	Rattus_norvegicus
ENSSDUG00000021807	trmt1l	99	64.157	ENSRBIG00000042589	TRMT1L	90	60.624	Rhinopithecus_bieti
ENSSDUG00000021807	trmt1l	99	64.157	ENSRROG00000032183	TRMT1L	90	60.624	Rhinopithecus_roxellana
ENSSDUG00000021807	trmt1l	97	65.657	ENSSBOG00000029282	TRMT1L	88	62.043	Saimiri_boliviensis_boliviensis
ENSSDUG00000021807	trmt1l	99	84.779	ENSSFOG00015004878	trmt1l	99	80.000	Scleropages_formosus
ENSSDUG00000021807	trmt1l	75	87.850	ENSSMAG00000015425	trmt1l	100	87.850	Scophthalmus_maximus
ENSSDUG00000021807	trmt1l	100	99.175	ENSSLDG00000016579	trmt1l	100	99.175	Seriola_lalandi_dorsalis
ENSSDUG00000021807	trmt1l	74	64.146	ENSSARG00000010135	TRMT1L	82	64.146	Sorex_araneus
ENSSDUG00000021807	trmt1l	98	67.993	ENSSPUG00000003927	TRMT1L	96	67.925	Sphenodon_punctatus
ENSSDUG00000021807	trmt1l	99	94.572	ENSSPAG00000008597	trmt1l	99	91.311	Stegastes_partitus
ENSSDUG00000021807	trmt1l	97	64.587	ENSSSCG00000021393	TRMT1L	80	62.758	Sus_scrofa
ENSSDUG00000021807	trmt1l	97	66.388	ENSTGUG00000003737	TRMT1L	92	64.050	Taeniopygia_guttata
ENSSDUG00000021807	trmt1l	99	79.208	ENSTRUG00000002396	trmt1l	99	72.414	Takifugu_rubripes
ENSSDUG00000021807	trmt1l	68	82.734	ENSTNIG00000005534	trmt1l	99	82.734	Tetraodon_nigroviridis
ENSSDUG00000021807	trmt1l	81	63.030	ENSTBEG00000016498	TRMT1L	76	62.424	Tupaia_belangeri
ENSSDUG00000021807	trmt1l	97	62.290	ENSTTRG00000005892	TRMT1L	85	60.190	Tursiops_truncatus
ENSSDUG00000021807	trmt1l	97	64.587	ENSUAMG00000020936	TRMT1L	88	60.916	Ursus_americanus
ENSSDUG00000021807	trmt1l	97	64.587	ENSUMAG00000021919	TRMT1L	87	60.916	Ursus_maritimus
ENSSDUG00000021807	trmt1l	97	65.152	ENSVPAG00000011854	TRMT1L	94	63.578	Vicugna_pacos
ENSSDUG00000021807	trmt1l	97	64.924	ENSVVUG00000009166	TRMT1L	89	60.876	Vulpes_vulpes
ENSSDUG00000021807	trmt1l	78	59.874	ENSXETG00000004539	trmt1l	98	57.225	Xenopus_tropicalis
ENSSDUG00000021807	trmt1l	96	85.274	ENSXCOG00000007372	trmt1l	90	85.274	Xiphophorus_couchianus
ENSSDUG00000021807	trmt1l	99	89.145	ENSXMAG00000003575	trmt1l	100	86.873	Xiphophorus_maculatus