EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000021808 (Gene tree)
Gene ID: 111238724
Gene Symbol: zc3h13
Alias: zgc:66359
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 10082 bases
Position: chrBDQW01001556.1:486528-496609
Accession: 111238724
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030278	zf-CCCH	PF00642.24	2.7e-06	1	1
ENSSDUP00000030266	zf-CCCH	PF00642.24	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000030802	-	1437	-	ENSSDUP00000030278	478 (aa)	-	-
ENSSDUT00000030790	-	6010	XM_022768379	ENSSDUP00000030266	1868 (aa)	XP_022624100	UPI000BBF1059

Gene Model

Click here to download ENSSDUG00000021808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000021808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000021808	zc3h13	91	58.352	ENSG00000123200	ZC3H13	98	67.717	Homo_sapiens
ENSSDUG00000021808	zc3h13	81	73.604	ENSAPOG00000001116	zc3h13	51	81.838	Acanthochromis_polyacanthus
ENSSDUG00000021808	zc3h13	91	59.685	ENSAPLG00000002707	ZC3H13	61	62.719	Anas_platyrhynchos
ENSSDUG00000021808	zc3h13	91	57.650	ENSCAFG00020019269	ZC3H13	98	57.079	Canis_lupus_dingo
ENSSDUG00000021808	zc3h13	51	76.452	ENSCVAG00000014663	zc3h13	51	75.440	Cyprinodon_variegatus
ENSSDUG00000021808	zc3h13	91	50.902	ENSFALG00000008196	ZC3H13	58	58.594	Ficedula_albicollis
ENSSDUG00000021808	zc3h13	71	52.736	ENSGALG00000016984	ZC3H13	89	53.807	Gallus_gallus
ENSSDUG00000021808	zc3h13	91	74.049	ENSGACG00000015166	zc3h13	99	72.565	Gasterosteus_aculeatus
ENSSDUG00000021808	zc3h13	89	76.948	ENSKMAG00000010701	zc3h13	99	76.446	Kryptolebias_marmoratus
ENSSDUG00000021808	zc3h13	91	59.152	ENSLACG00000003806	ZC3H13	50	55.378	Latimeria_chalumnae
ENSSDUG00000021808	zc3h13	91	52.121	ENSMODG00000014969	ZC3H13	58	64.502	Monodelphis_domestica
ENSSDUG00000021808	zc3h13	91	58.352	ENSNLEG00000002498	ZC3H13	65	46.154	Nomascus_leucogenys
ENSSDUG00000021808	zc3h13	91	66.142	ENSOMEG00000007044	zc3h13	51	75.258	Oryzias_melastigma
ENSSDUG00000021808	zc3h13	74	62.334	ENSPKIG00000019756	zc3h13	68	81.991	Paramormyrops_kingsleyae
ENSSDUG00000021808	zc3h13	91	51.587	ENSPSIG00000012518	ZC3H13	96	66.129	Pelodiscus_sinensis
ENSSDUG00000021808	zc3h13	92	56.889	ENSPEMG00000021979	-	100	56.923	Peromyscus_maniculatus_bairdii
ENSSDUG00000021808	zc3h13	61	67.782	ENSPCAG00000001146	ZC3H13	68	62.132	Procavia_capensis
ENSSDUG00000021808	zc3h13	91	58.652	ENSSPUG00000013358	ZC3H13	59	63.043	Sphenodon_punctatus
ENSSDUG00000021808	zc3h13	89	84.356	ENSTNIG00000014523	zc3h13	93	79.487	Tetraodon_nigroviridis
ENSSDUG00000021808	zc3h13	68	71.779	ENSTTRG00000003611	ZC3H13	58	69.277	Tursiops_truncatus
ENSSDUG00000021808	zc3h13	88	50.463	ENSVPAG00000005179	ZC3H13	60	56.911	Vicugna_pacos
ENSSDUG00000021808	zc3h13	88	58.333	ENSVVUG00000028395	ZC3H13	51	39.293	Vulpes_vulpes
ENSSDUG00000021808	zc3h13	95	54.777	ENSXETG00000014637	zc3h13	97	47.051	Xenopus_tropicalis