EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000021844 (Gene tree)
Gene ID: 111229548
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA-decapping protein 3-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2725 bases
Position: chrBDQW01000242.1:1150269-1152993
Accession: 111229548
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030314	FDF	PF09532.10	1.4e-10	1	1
ENSSDUP00000030314	LSM14	PF12701.7	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000030840	-	1649	XM_022755903	ENSSDUP00000030314	478 (aa)	XP_022611624	UPI000BBEC094

Gene Model

Click here to download ENSSDUG00000021844's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000021844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000021844	edc3	100	68.737	ENSSDUG00000007671	EDC3	100	68.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000021844	edc3	100	69.216	ENSG00000179151	EDC3	100	79.630	Homo_sapiens
ENSSDUG00000021844	edc3	100	96.025	ENSAPOG00000010791	edc3	100	96.025	Acanthochromis_polyacanthus
ENSSDUG00000021844	edc3	100	59.514	ENSAPOG00000008655	EDC3	100	59.514	Acanthochromis_polyacanthus
ENSSDUG00000021844	edc3	100	69.608	ENSAMEG00000008963	EDC3	100	69.020	Ailuropoda_melanoleuca
ENSSDUG00000021844	edc3	99	66.064	ENSACIG00000005330	EDC3	99	66.064	Amphilophus_citrinellus
ENSSDUG00000021844	edc3	100	93.724	ENSACIG00000017751	edc3	100	93.724	Amphilophus_citrinellus
ENSSDUG00000021844	edc3	100	65.839	ENSAOCG00000009103	-	100	65.839	Amphiprion_ocellaris
ENSSDUG00000021844	edc3	100	96.444	ENSAOCG00000005431	edc3	100	96.444	Amphiprion_ocellaris
ENSSDUG00000021844	edc3	100	65.702	ENSAPEG00000007841	EDC3	100	65.217	Amphiprion_percula
ENSSDUG00000021844	edc3	100	96.444	ENSAPEG00000000968	edc3	100	96.444	Amphiprion_percula
ENSSDUG00000021844	edc3	100	96.025	ENSATEG00000015505	edc3	100	96.025	Anabas_testudineus
ENSSDUG00000021844	edc3	100	67.562	ENSATEG00000004205	-	100	67.562	Anabas_testudineus
ENSSDUG00000021844	edc3	89	69.604	ENSAPLG00000008957	EDC3	87	76.010	Anas_platyrhynchos
ENSSDUG00000021844	edc3	77	68.434	ENSACAG00000000460	-	100	68.434	Anolis_carolinensis
ENSSDUG00000021844	edc3	100	70.138	ENSANAG00000024078	EDC3	100	69.412	Aotus_nancymaae
ENSSDUG00000021844	edc3	99	66.320	ENSACLG00000018776	-	100	66.183	Astatotilapia_calliptera
ENSSDUG00000021844	edc3	100	92.887	ENSACLG00000007232	edc3	100	92.887	Astatotilapia_calliptera
ENSSDUG00000021844	edc3	100	81.944	ENSAMXG00000001589	edc3	100	81.151	Astyanax_mexicanus
ENSSDUG00000021844	edc3	100	69.941	ENSBTAG00000007308	EDC3	100	69.216	Bos_taurus
ENSSDUG00000021844	edc3	100	69.412	ENSCJAG00000017681	EDC3	100	69.412	Callithrix_jacchus
ENSSDUG00000021844	edc3	100	69.155	ENSCAFG00000017935	EDC3	100	68.824	Canis_familiaris
ENSSDUG00000021844	edc3	100	69.155	ENSCAFG00020003909	EDC3	100	68.824	Canis_lupus_dingo
ENSSDUG00000021844	edc3	100	70.138	ENSCHIG00000023658	EDC3	100	69.412	Capra_hircus
ENSSDUG00000021844	edc3	100	69.412	ENSTSYG00000004822	EDC3	100	69.412	Carlito_syrichta
ENSSDUG00000021844	edc3	100	69.804	ENSCPOG00000015595	EDC3	100	69.804	Cavia_porcellus
ENSSDUG00000021844	edc3	100	69.216	ENSCCAG00000021663	EDC3	100	69.216	Cebus_capucinus
ENSSDUG00000021844	edc3	100	69.412	ENSCATG00000037511	EDC3	100	69.412	Cercocebus_atys
ENSSDUG00000021844	edc3	100	69.608	ENSCLAG00000005700	EDC3	100	69.608	Chinchilla_lanigera
ENSSDUG00000021844	edc3	100	69.412	ENSCSAG00000014239	EDC3	100	69.412	Chlorocebus_sabaeus
ENSSDUG00000021844	edc3	100	70.727	ENSCPBG00000024239	EDC3	100	70.588	Chrysemys_picta_bellii
ENSSDUG00000021844	edc3	100	39.489	ENSCING00000022142	-	99	39.412	Ciona_intestinalis
ENSSDUG00000021844	edc3	100	69.412	ENSCANG00000028699	EDC3	100	69.412	Colobus_angolensis_palliatus
ENSSDUG00000021844	edc3	100	69.412	ENSCGRG00001013874	Edc3	100	69.412	Cricetulus_griseus_chok1gshd
ENSSDUG00000021844	edc3	100	69.412	ENSCGRG00000011885	Edc3	100	69.412	Cricetulus_griseus_crigri
ENSSDUG00000021844	edc3	99	92.662	ENSCSEG00000012996	edc3	99	92.662	Cynoglossus_semilaevis
ENSSDUG00000021844	edc3	100	91.423	ENSCVAG00000008023	edc3	100	91.423	Cyprinodon_variegatus
ENSSDUG00000021844	edc3	99	78.020	ENSDARG00000051931	edc3	99	77.426	Danio_rerio
ENSSDUG00000021844	edc3	100	60.659	ENSDNOG00000030661	EDC3	100	60.659	Dasypus_novemcinctus
ENSSDUG00000021844	edc3	68	79.630	ENSETEG00000002398	-	64	79.630	Echinops_telfairi
ENSSDUG00000021844	edc3	100	69.608	ENSEASG00005005071	EDC3	100	69.020	Equus_asinus_asinus
ENSSDUG00000021844	edc3	100	69.608	ENSECAG00000017994	EDC3	100	69.020	Equus_caballus
ENSSDUG00000021844	edc3	100	83.058	ENSELUG00000005794	edc3	100	82.851	Esox_lucius
ENSSDUG00000021844	edc3	100	72.917	ENSELUG00000007607	EDC3	100	72.292	Esox_lucius
ENSSDUG00000021844	edc3	100	69.216	ENSFCAG00000002014	EDC3	100	69.216	Felis_catus
ENSSDUG00000021844	edc3	98	69.277	ENSFALG00000004543	EDC3	96	68.675	Ficedula_albicollis
ENSSDUG00000021844	edc3	100	69.608	ENSFDAG00000012582	EDC3	100	69.608	Fukomys_damarensis
ENSSDUG00000021844	edc3	100	92.678	ENSFHEG00000009375	edc3	100	92.678	Fundulus_heteroclitus
ENSSDUG00000021844	edc3	100	88.773	ENSGMOG00000002715	edc3	100	88.773	Gadus_morhua
ENSSDUG00000021844	edc3	100	70.414	ENSGALG00000040181	EDC3	100	70.020	Gallus_gallus
ENSSDUG00000021844	edc3	100	90.586	ENSGAFG00000014433	edc3	100	90.586	Gambusia_affinis
ENSSDUG00000021844	edc3	99	60.861	ENSGACG00000014671	EDC3	99	60.665	Gasterosteus_aculeatus
ENSSDUG00000021844	edc3	100	92.887	ENSGACG00000009783	edc3	100	92.887	Gasterosteus_aculeatus
ENSSDUG00000021844	edc3	100	71.006	ENSGAGG00000023477	EDC3	100	70.392	Gopherus_agassizii
ENSSDUG00000021844	edc3	100	69.216	ENSGGOG00000003552	EDC3	100	69.216	Gorilla_gorilla
ENSSDUG00000021844	edc3	100	92.887	ENSHBUG00000003635	edc3	100	92.887	Haplochromis_burtoni
ENSSDUG00000021844	edc3	99	66.528	ENSHBUG00000020817	EDC3	100	66.390	Haplochromis_burtoni
ENSSDUG00000021844	edc3	100	90.417	ENSHCOG00000016834	edc3	100	90.417	Hippocampus_comes
ENSSDUG00000021844	edc3	99	81.325	ENSIPUG00000005695	edc3	100	80.522	Ictalurus_punctatus
ENSSDUG00000021844	edc3	100	69.745	ENSSTOG00000013936	EDC3	100	69.412	Ictidomys_tridecemlineatus
ENSSDUG00000021844	edc3	100	69.745	ENSJJAG00000008074	Edc3	100	69.216	Jaculus_jaculus
ENSSDUG00000021844	edc3	100	92.067	ENSKMAG00000001243	edc3	100	92.276	Kryptolebias_marmoratus
ENSSDUG00000021844	edc3	100	64.523	ENSKMAG00000001987	EDC3	100	64.315	Kryptolebias_marmoratus
ENSSDUG00000021844	edc3	100	64.562	ENSLBEG00000017984	EDC3	100	63.951	Labrus_bergylta
ENSSDUG00000021844	edc3	100	94.770	ENSLBEG00000013435	edc3	99	94.770	Labrus_bergylta
ENSSDUG00000021844	edc3	100	72.179	ENSLACG00000014149	EDC3	100	71.595	Latimeria_chalumnae
ENSSDUG00000021844	edc3	99	74.696	ENSLOCG00000014625	edc3	99	74.696	Lepisosteus_oculatus
ENSSDUG00000021844	edc3	100	70.079	ENSLAFG00000002992	EDC3	100	69.488	Loxodonta_africana
ENSSDUG00000021844	edc3	100	69.608	ENSMFAG00000043074	EDC3	100	69.608	Macaca_fascicularis
ENSSDUG00000021844	edc3	100	69.608	ENSMMUG00000011071	EDC3	100	69.608	Macaca_mulatta
ENSSDUG00000021844	edc3	100	69.608	ENSMNEG00000035316	EDC3	100	69.608	Macaca_nemestrina
ENSSDUG00000021844	edc3	100	69.412	ENSMLEG00000030372	EDC3	100	69.412	Mandrillus_leucophaeus
ENSSDUG00000021844	edc3	99	65.904	ENSMAMG00000005423	-	99	65.904	Mastacembelus_armatus
ENSSDUG00000021844	edc3	100	94.561	ENSMAMG00000000505	edc3	100	94.561	Mastacembelus_armatus
ENSSDUG00000021844	edc3	100	65.714	ENSMZEG00005005654	EDC3	100	65.714	Maylandia_zebra
ENSSDUG00000021844	edc3	100	92.678	ENSMZEG00005004892	edc3	100	92.678	Maylandia_zebra
ENSSDUG00000021844	edc3	100	70.217	ENSMGAG00000002617	EDC3	100	69.822	Meleagris_gallopavo
ENSSDUG00000021844	edc3	100	69.412	ENSMICG00000043190	EDC3	100	69.412	Microcebus_murinus
ENSSDUG00000021844	edc3	100	69.020	ENSMOCG00000016205	Edc3	100	69.020	Microtus_ochrogaster
ENSSDUG00000021844	edc3	99	95.178	ENSMMOG00000012278	edc3	99	95.178	Mola_mola
ENSSDUG00000021844	edc3	100	69.216	ENSMODG00000009442	EDC3	100	69.216	Monodelphis_domestica
ENSSDUG00000021844	edc3	100	94.979	ENSMALG00000008658	edc3	100	94.979	Monopterus_albus
ENSSDUG00000021844	edc3	100	68.369	MGP_CAROLIEiJ_G0032280	Edc3	100	78.462	Mus_caroli
ENSSDUG00000021844	edc3	100	68.369	ENSMUSG00000038957	Edc3	100	78.462	Mus_musculus
ENSSDUG00000021844	edc3	100	68.369	MGP_PahariEiJ_G0015146	Edc3	100	78.462	Mus_pahari
ENSSDUG00000021844	edc3	100	68.369	MGP_SPRETEiJ_G0033420	Edc3	100	78.462	Mus_spretus
ENSSDUG00000021844	edc3	100	69.216	ENSMPUG00000017293	EDC3	100	69.216	Mustela_putorius_furo
ENSSDUG00000021844	edc3	100	69.727	ENSMLUG00000016382	EDC3	100	69.727	Myotis_lucifugus
ENSSDUG00000021844	edc3	100	69.941	ENSNGAG00000010923	Edc3	100	69.020	Nannospalax_galili
ENSSDUG00000021844	edc3	100	92.469	ENSNBRG00000002434	edc3	100	92.469	Neolamprologus_brichardi
ENSSDUG00000021844	edc3	99	66.598	ENSNBRG00000007881	EDC3	100	66.460	Neolamprologus_brichardi
ENSSDUG00000021844	edc3	100	60.000	ENSNLEG00000014577	EDC3	100	60.000	Nomascus_leucogenys
ENSSDUG00000021844	edc3	100	69.034	ENSMEUG00000009077	EDC3	100	69.034	Notamacropus_eugenii
ENSSDUG00000021844	edc3	84	79.630	ENSOPRG00000009540	-	79	79.630	Ochotona_princeps
ENSSDUG00000021844	edc3	100	93.096	ENSONIG00000008434	edc3	100	93.096	Oreochromis_niloticus
ENSSDUG00000021844	edc3	100	62.209	ENSONIG00000002932	-	100	62.209	Oreochromis_niloticus
ENSSDUG00000021844	edc3	77	67.254	ENSOCUG00000017740	EDC3	86	66.834	Oryctolagus_cuniculus
ENSSDUG00000021844	edc3	100	89.353	ENSORLG00000004883	edc3	100	89.353	Oryzias_latipes
ENSSDUG00000021844	edc3	100	64.108	ENSORLG00000014399	-	98	64.108	Oryzias_latipes
ENSSDUG00000021844	edc3	100	89.562	ENSORLG00020012262	edc3	100	89.562	Oryzias_latipes_hni
ENSSDUG00000021844	edc3	100	64.108	ENSORLG00020019446	-	100	64.108	Oryzias_latipes_hni
ENSSDUG00000021844	edc3	100	64.108	ENSORLG00015017635	-	96	64.108	Oryzias_latipes_hsok
ENSSDUG00000021844	edc3	100	89.353	ENSORLG00015005634	edc3	100	89.353	Oryzias_latipes_hsok
ENSSDUG00000021844	edc3	100	65.217	ENSOMEG00000017354	EDC3	100	65.217	Oryzias_melastigma
ENSSDUG00000021844	edc3	100	89.749	ENSOMEG00000014026	edc3	100	89.749	Oryzias_melastigma
ENSSDUG00000021844	edc3	100	68.369	ENSOGAG00000014441	EDC3	100	69.216	Otolemur_garnettii
ENSSDUG00000021844	edc3	100	69.412	ENSOARG00000003476	EDC3	100	69.080	Ovis_aries
ENSSDUG00000021844	edc3	100	69.216	ENSPPAG00000040143	EDC3	100	69.216	Pan_paniscus
ENSSDUG00000021844	edc3	100	69.216	ENSPPRG00000006257	EDC3	100	69.216	Panthera_pardus
ENSSDUG00000021844	edc3	100	69.216	ENSPTIG00000017424	EDC3	100	69.216	Panthera_tigris_altaica
ENSSDUG00000021844	edc3	100	69.216	ENSPTRG00000007279	EDC3	100	69.216	Pan_troglodytes
ENSSDUG00000021844	edc3	100	69.412	ENSPANG00000015997	EDC3	100	69.412	Papio_anubis
ENSSDUG00000021844	edc3	100	77.374	ENSPKIG00000019810	EDC3	100	77.419	Paramormyrops_kingsleyae
ENSSDUG00000021844	edc3	100	75.692	ENSPKIG00000004416	edc3	100	75.494	Paramormyrops_kingsleyae
ENSSDUG00000021844	edc3	100	66.601	ENSPSIG00000008474	EDC3	100	67.059	Pelodiscus_sinensis
ENSSDUG00000021844	edc3	100	90.625	ENSPMGG00000007223	edc3	100	90.208	Periophthalmus_magnuspinnatus
ENSSDUG00000021844	edc3	100	69.412	ENSPEMG00000015260	Edc3	100	69.412	Peromyscus_maniculatus_bairdii
ENSSDUG00000021844	edc3	100	68.959	ENSPCIG00000006276	EDC3	70	69.368	Phascolarctos_cinereus
ENSSDUG00000021844	edc3	100	92.050	ENSPFOG00000012204	edc3	100	92.050	Poecilia_formosa
ENSSDUG00000021844	edc3	100	92.050	ENSPLAG00000014420	edc3	100	92.050	Poecilia_latipinna
ENSSDUG00000021844	edc3	100	92.050	ENSPMEG00000023289	edc3	100	92.050	Poecilia_mexicana
ENSSDUG00000021844	edc3	100	91.841	ENSPREG00000016022	edc3	100	91.841	Poecilia_reticulata
ENSSDUG00000021844	edc3	100	68.431	ENSPPYG00000006642	EDC3	100	68.431	Pongo_abelii
ENSSDUG00000021844	edc3	93	79.630	ENSPCAG00000002802	EDC3	88	79.630	Procavia_capensis
ENSSDUG00000021844	edc3	100	69.608	ENSPCOG00000013364	EDC3	100	69.608	Propithecus_coquereli
ENSSDUG00000021844	edc3	100	70.000	ENSPVAG00000014733	EDC3	100	69.412	Pteropus_vampyrus
ENSSDUG00000021844	edc3	100	92.887	ENSPNYG00000021797	edc3	100	92.887	Pundamilia_nyererei
ENSSDUG00000021844	edc3	99	66.528	ENSPNYG00000009669	EDC3	100	66.390	Pundamilia_nyererei
ENSSDUG00000021844	edc3	100	81.349	ENSPNAG00000019657	edc3	100	80.952	Pygocentrus_nattereri
ENSSDUG00000021844	edc3	99	68.379	ENSRNOG00000019579	Edc3	99	69.231	Rattus_norvegicus
ENSSDUG00000021844	edc3	100	69.412	ENSRBIG00000019488	EDC3	100	69.412	Rhinopithecus_bieti
ENSSDUG00000021844	edc3	100	69.412	ENSRROG00000034959	EDC3	100	69.412	Rhinopithecus_roxellana
ENSSDUG00000021844	edc3	100	69.216	ENSSBOG00000004896	EDC3	100	69.216	Saimiri_boliviensis_boliviensis
ENSSDUG00000021844	edc3	96	68.852	ENSSHAG00000015075	EDC3	95	68.238	Sarcophilus_harrisii
ENSSDUG00000021844	edc3	100	74.741	ENSSFOG00015002439	edc3	100	75.155	Scleropages_formosus
ENSSDUG00000021844	edc3	100	80.517	ENSSFOG00015016939	edc3	100	79.722	Scleropages_formosus
ENSSDUG00000021844	edc3	100	96.025	ENSSMAG00000010695	edc3	100	96.025	Scophthalmus_maximus
ENSSDUG00000021844	edc3	99	66.183	ENSSMAG00000010176	-	99	66.183	Scophthalmus_maximus
ENSSDUG00000021844	edc3	100	99.791	ENSSLDG00000022046	edc3	100	99.791	Seriola_lalandi_dorsalis
ENSSDUG00000021844	edc3	79	79.435	ENSSARG00000003907	EDC3	80	79.435	Sorex_araneus
ENSSDUG00000021844	edc3	100	69.155	ENSSPUG00000008232	EDC3	100	68.762	Sphenodon_punctatus
ENSSDUG00000021844	edc3	100	96.234	ENSSPAG00000010009	edc3	100	96.234	Stegastes_partitus
ENSSDUG00000021844	edc3	100	66.046	ENSSPAG00000020327	EDC3	100	66.460	Stegastes_partitus
ENSSDUG00000021844	edc3	100	71.757	ENSSSCG00000001903	EDC3	100	71.757	Sus_scrofa
ENSSDUG00000021844	edc3	100	71.006	ENSTGUG00000004007	EDC3	100	70.217	Taeniopygia_guttata
ENSSDUG00000021844	edc3	100	91.841	ENSTRUG00000017078	edc3	100	91.632	Takifugu_rubripes
ENSSDUG00000021844	edc3	100	91.875	ENSTNIG00000016047	edc3	100	91.875	Tetraodon_nigroviridis
ENSSDUG00000021844	edc3	100	69.745	ENSTTRG00000007990	EDC3	100	69.745	Tursiops_truncatus
ENSSDUG00000021844	edc3	100	69.608	ENSUAMG00000026710	-	100	69.020	Ursus_americanus
ENSSDUG00000021844	edc3	100	69.608	ENSUMAG00000005006	EDC3	96	69.020	Ursus_maritimus
ENSSDUG00000021844	edc3	84	70.370	ENSVPAG00000003499	-	79	70.370	Vicugna_pacos
ENSSDUG00000021844	edc3	100	69.412	ENSVVUG00000018601	EDC3	100	68.824	Vulpes_vulpes
ENSSDUG00000021844	edc3	72	75.645	ENSXETG00000010622	edc3	99	77.077	Xenopus_tropicalis
ENSSDUG00000021844	edc3	100	91.841	ENSXMAG00000007377	edc3	100	91.841	Xiphophorus_maculatus