EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000021871 (Gene tree)
Gene ID: 111227497
Gene Symbol: zc3h3
Alias: fj68a07|wu:fj68a07
Full Name: zinc finger CCCH-type containing 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 70850 bases
Position: chrBDQW01000189.1:1991047-2061896
Accession: 111227497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030361	zf-CCCH	PF00642.24	1.3e-17	1	2
ENSSDUP00000030361	zf-CCCH	PF00642.24	1.3e-17	2	2
ENSSDUP00000030366	zf-CCCH	PF00642.24	1.3e-17	1	2
ENSSDUP00000030366	zf-CCCH	PF00642.24	1.3e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000030887	-	2928	-	ENSSDUP00000030361	935 (aa)	-	-
ENSSDUT00000030892	-	3087	XM_022753017	ENSSDUP00000030366	935 (aa)	XP_022608738	-

Gene Model

Click here to download ENSSDUG00000021871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000021871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000021871	zc3h3	62	46.429	ENSG00000014164	ZC3H3	62	46.429	Homo_sapiens
ENSSDUG00000021871	zc3h3	99	70.944	ENSAPOG00000011522	zc3h3	100	71.156	Acanthochromis_polyacanthus
ENSSDUG00000021871	zc3h3	97	62.854	ENSACIG00000005563	zc3h3	100	60.363	Amphilophus_citrinellus
ENSSDUG00000021871	zc3h3	99	66.631	ENSAOCG00000013763	zc3h3	99	71.396	Amphiprion_ocellaris
ENSSDUG00000021871	zc3h3	89	70.602	ENSAPEG00000020037	zc3h3	88	71.074	Amphiprion_percula
ENSSDUG00000021871	zc3h3	99	71.550	ENSATEG00000003718	zc3h3	100	71.338	Anabas_testudineus
ENSSDUG00000021871	zc3h3	61	46.341	ENSANAG00000018742	ZC3H3	61	46.429	Aotus_nancymaae
ENSSDUG00000021871	zc3h3	99	65.953	ENSACLG00000023035	zc3h3	100	66.310	Astatotilapia_calliptera
ENSSDUG00000021871	zc3h3	99	44.578	ENSAMXG00000041805	zc3h3	97	44.755	Astyanax_mexicanus
ENSSDUG00000021871	zc3h3	61	44.045	ENSBTAG00000021472	ZC3H3	70	43.345	Bos_taurus
ENSSDUG00000021871	zc3h3	61	46.914	ENSCJAG00000021439	ZC3H3	76	46.429	Callithrix_jacchus
ENSSDUG00000021871	zc3h3	53	44.340	ENSCAFG00000001299	ZC3H3	60	45.009	Canis_familiaris
ENSSDUG00000021871	zc3h3	62	44.340	ENSCAFG00020018654	ZC3H3	62	45.009	Canis_lupus_dingo
ENSSDUG00000021871	zc3h3	61	45.783	ENSCHIG00000018027	ZC3H3	61	45.783	Capra_hircus
ENSSDUG00000021871	zc3h3	64	43.902	ENSTSYG00000034906	ZC3H3	63	43.902	Carlito_syrichta
ENSSDUG00000021871	zc3h3	54	37.546	ENSCAPG00000013918	ZC3H3	54	37.729	Cavia_aperea
ENSSDUG00000021871	zc3h3	54	43.091	ENSCPOG00000006248	ZC3H3	53	43.273	Cavia_porcellus
ENSSDUG00000021871	zc3h3	61	46.341	ENSCCAG00000035267	ZC3H3	62	46.341	Cebus_capucinus
ENSSDUG00000021871	zc3h3	62	45.977	ENSCATG00000020900	ZC3H3	62	46.429	Cercocebus_atys
ENSSDUG00000021871	zc3h3	61	44.762	ENSCLAG00000009999	ZC3H3	76	44.578	Chinchilla_lanigera
ENSSDUG00000021871	zc3h3	62	45.455	ENSCSAG00000009074	ZC3H3	61	45.882	Chlorocebus_sabaeus
ENSSDUG00000021871	zc3h3	99	35.363	ENSCPBG00000019050	ZC3H3	100	35.294	Chrysemys_picta_bellii
ENSSDUG00000021871	zc3h3	62	45.455	ENSCANG00000032420	ZC3H3	62	45.455	Colobus_angolensis_palliatus
ENSSDUG00000021871	zc3h3	62	44.256	ENSCGRG00001016268	Zc3h3	62	44.444	Cricetulus_griseus_chok1gshd
ENSSDUG00000021871	zc3h3	62	44.256	ENSCGRG00000012889	Zc3h3	62	44.444	Cricetulus_griseus_crigri
ENSSDUG00000021871	zc3h3	84	69.003	ENSCSEG00000002583	zc3h3	98	69.315	Cynoglossus_semilaevis
ENSSDUG00000021871	zc3h3	99	44.581	ENSDARG00000090751	zc3h3	99	45.092	Danio_rerio
ENSSDUG00000021871	zc3h3	63	44.186	ENSDNOG00000031054	ZC3H3	76	44.186	Dasypus_novemcinctus
ENSSDUG00000021871	zc3h3	53	43.097	ENSDORG00000023832	Zc3h3	55	43.527	Dipodomys_ordii
ENSSDUG00000021871	zc3h3	65	42.697	ENSEASG00005009621	ZC3H3	63	42.697	Equus_asinus_asinus
ENSSDUG00000021871	zc3h3	58	42.697	ENSECAG00000012556	ZC3H3	62	42.697	Equus_caballus
ENSSDUG00000021871	zc3h3	88	54.884	ENSELUG00000024269	zc3h3	79	54.756	Esox_lucius
ENSSDUG00000021871	zc3h3	62	43.123	ENSFCAG00000013238	ZC3H3	62	43.866	Felis_catus
ENSSDUG00000021871	zc3h3	51	43.762	ENSFDAG00000017737	ZC3H3	62	43.954	Fukomys_damarensis
ENSSDUG00000021871	zc3h3	99	61.277	ENSFHEG00000017714	zc3h3	99	60.532	Fundulus_heteroclitus
ENSSDUG00000021871	zc3h3	99	59.529	ENSGAFG00000014360	zc3h3	99	59.101	Gambusia_affinis
ENSSDUG00000021871	zc3h3	53	43.704	ENSGGOG00000002833	ZC3H3	57	42.908	Gorilla_gorilla
ENSSDUG00000021871	zc3h3	99	65.739	ENSHBUG00000004627	zc3h3	100	65.989	Haplochromis_burtoni
ENSSDUG00000021871	zc3h3	63	45.094	ENSHGLG00000011234	ZC3H3	64	45.283	Heterocephalus_glaber_female
ENSSDUG00000021871	zc3h3	72	41.066	ENSHGLG00100006782	ZC3H3	79	41.270	Heterocephalus_glaber_male
ENSSDUG00000021871	zc3h3	97	51.150	ENSHCOG00000006579	zc3h3	98	51.479	Hippocampus_comes
ENSSDUG00000021871	zc3h3	99	45.184	ENSIPUG00000006438	zc3h3	77	50.941	Ictalurus_punctatus
ENSSDUG00000021871	zc3h3	64	44.000	ENSSTOG00000004358	ZC3H3	62	44.190	Ictidomys_tridecemlineatus
ENSSDUG00000021871	zc3h3	60	44.380	ENSJJAG00000023757	Zc3h3	69	43.902	Jaculus_jaculus
ENSSDUG00000021871	zc3h3	99	64.888	ENSKMAG00000017876	zc3h3	100	64.637	Kryptolebias_marmoratus
ENSSDUG00000021871	zc3h3	69	47.959	ENSLOCG00000008621	ZC3H3	66	47.813	Lepisosteus_oculatus
ENSSDUG00000021871	zc3h3	62	45.977	ENSMFAG00000036060	ZC3H3	62	46.429	Macaca_fascicularis
ENSSDUG00000021871	zc3h3	62	45.455	ENSMNEG00000029433	ZC3H3	61	45.882	Macaca_nemestrina
ENSSDUG00000021871	zc3h3	62	45.977	ENSMLEG00000038139	ZC3H3	62	45.977	Mandrillus_leucophaeus
ENSSDUG00000021871	zc3h3	99	71.732	ENSMAMG00000014787	zc3h3	100	72.264	Mastacembelus_armatus
ENSSDUG00000021871	zc3h3	99	65.953	ENSMZEG00005017290	zc3h3	100	66.310	Maylandia_zebra
ENSSDUG00000021871	zc3h3	61	44.742	ENSMAUG00000011009	Zc3h3	61	44.933	Mesocricetus_auratus
ENSSDUG00000021871	zc3h3	64	44.963	ENSMICG00000001100	ZC3H3	63	45.574	Microcebus_murinus
ENSSDUG00000021871	zc3h3	63	44.742	ENSMOCG00000000733	Zc3h3	62	44.933	Microtus_ochrogaster
ENSSDUG00000021871	zc3h3	99	61.619	ENSMMOG00000016823	zc3h3	100	62.040	Mola_mola
ENSSDUG00000021871	zc3h3	60	45.783	ENSMODG00000011385	ZC3H3	64	45.783	Monodelphis_domestica
ENSSDUG00000021871	zc3h3	99	72.264	ENSMALG00000014610	zc3h3	100	72.476	Monopterus_albus
ENSSDUG00000021871	zc3h3	62	44.886	MGP_CAROLIEiJ_G0019897	Zc3h3	62	45.076	Mus_caroli
ENSSDUG00000021871	zc3h3	62	45.076	ENSMUSG00000075600	Zc3h3	62	45.265	Mus_musculus
ENSSDUG00000021871	zc3h3	53	44.981	MGP_PahariEiJ_G0019905	Zc3h3	54	45.167	Mus_pahari
ENSSDUG00000021871	zc3h3	53	45.076	MGP_SPRETEiJ_G0020797	Zc3h3	53	45.265	Mus_spretus
ENSSDUG00000021871	zc3h3	62	45.455	ENSMPUG00000008357	ZC3H3	67	45.951	Mustela_putorius_furo
ENSSDUG00000021871	zc3h3	67	43.220	ENSNGAG00000008574	Zc3h3	70	42.904	Nannospalax_galili
ENSSDUG00000021871	zc3h3	98	63.283	ENSNBRG00000005454	zc3h3	94	62.688	Neolamprologus_brichardi
ENSSDUG00000021871	zc3h3	61	45.977	ENSNLEG00000001681	ZC3H3	76	46.429	Nomascus_leucogenys
ENSSDUG00000021871	zc3h3	51	43.984	ENSMEUG00000008554	ZC3H3	53	43.107	Notamacropus_eugenii
ENSSDUG00000021871	zc3h3	52	44.423	ENSODEG00000014239	ZC3H3	53	44.466	Octodon_degus
ENSSDUG00000021871	zc3h3	57	42.975	ENSOANG00000003534	-	67	42.810	Ornithorhynchus_anatinus
ENSSDUG00000021871	zc3h3	99	59.144	ENSORLG00000026930	zc3h3	99	59.786	Oryzias_latipes
ENSSDUG00000021871	zc3h3	99	59.529	ENSORLG00020002734	zc3h3	99	60.385	Oryzias_latipes_hni
ENSSDUG00000021871	zc3h3	99	59.398	ENSORLG00015001257	zc3h3	99	60.258	Oryzias_latipes_hsok
ENSSDUG00000021871	zc3h3	97	51.896	ENSOMEG00000015369	zc3h3	99	52.979	Oryzias_melastigma
ENSSDUG00000021871	zc3h3	61	43.321	ENSOGAG00000014907	ZC3H3	61	43.074	Otolemur_garnettii
ENSSDUG00000021871	zc3h3	61	42.322	ENSOARG00000000808	ZC3H3	62	42.214	Ovis_aries
ENSSDUG00000021871	zc3h3	63	45.455	ENSPPAG00000035455	ZC3H3	55	45.455	Pan_paniscus
ENSSDUG00000021871	zc3h3	62	43.123	ENSPPRG00000011707	ZC3H3	62	43.866	Panthera_pardus
ENSSDUG00000021871	zc3h3	63	45.977	ENSPTRG00000020655	ZC3H3	64	46.429	Pan_troglodytes
ENSSDUG00000021871	zc3h3	62	44.828	ENSPANG00000016578	ZC3H3	62	45.238	Papio_anubis
ENSSDUG00000021871	zc3h3	67	46.074	ENSPKIG00000002936	zc3h3	68	46.707	Paramormyrops_kingsleyae
ENSSDUG00000021871	zc3h3	53	44.508	ENSPEMG00000013893	Zc3h3	53	44.697	Peromyscus_maniculatus_bairdii
ENSSDUG00000021871	zc3h3	98	60.541	ENSPFOG00000023405	zc3h3	97	60.108	Poecilia_formosa
ENSSDUG00000021871	zc3h3	99	60.856	ENSPLAG00000001686	zc3h3	99	60.428	Poecilia_latipinna
ENSSDUG00000021871	zc3h3	99	60.749	ENSPMEG00000002341	zc3h3	99	60.321	Poecilia_mexicana
ENSSDUG00000021871	zc3h3	99	61.176	ENSPREG00000008923	zc3h3	99	60.856	Poecilia_reticulata
ENSSDUG00000021871	zc3h3	62	45.455	ENSPPYG00000018935	ZC3H3	61	45.882	Pongo_abelii
ENSSDUG00000021871	zc3h3	65	44.944	ENSPCOG00000028174	ZC3H3	67	44.265	Propithecus_coquereli
ENSSDUG00000021871	zc3h3	99	65.846	ENSPNYG00000023105	zc3h3	100	66.203	Pundamilia_nyererei
ENSSDUG00000021871	zc3h3	99	45.650	ENSPNAG00000009850	zc3h3	78	50.132	Pygocentrus_nattereri
ENSSDUG00000021871	zc3h3	62	44.828	ENSRBIG00000039855	ZC3H3	62	45.238	Rhinopithecus_bieti
ENSSDUG00000021871	zc3h3	62	44.828	ENSRROG00000040493	ZC3H3	62	45.238	Rhinopithecus_roxellana
ENSSDUG00000021871	zc3h3	61	46.341	ENSSBOG00000021819	ZC3H3	62	46.429	Saimiri_boliviensis_boliviensis
ENSSDUG00000021871	zc3h3	98	36.134	ENSSFOG00015001784	zc3h3	95	36.498	Scleropages_formosus
ENSSDUG00000021871	zc3h3	99	67.537	ENSSMAG00000016302	zc3h3	100	67.745	Scophthalmus_maximus
ENSSDUG00000021871	zc3h3	99	97.428	ENSSLDG00000016166	zc3h3	100	97.428	Seriola_lalandi_dorsalis
ENSSDUG00000021871	zc3h3	99	70.347	ENSSPAG00000008518	zc3h3	100	70.873	Stegastes_partitus
ENSSDUG00000021871	zc3h3	53	43.623	ENSSSCG00000006956	ZC3H3	75	41.667	Sus_scrofa
ENSSDUG00000021871	zc3h3	62	44.318	ENSUAMG00000012919	ZC3H3	67	44.318	Ursus_americanus
ENSSDUG00000021871	zc3h3	53	44.633	ENSVVUG00000022609	ZC3H3	54	45.009	Vulpes_vulpes
ENSSDUG00000021871	zc3h3	70	42.237	ENSXETG00000004937	zc3h3	69	42.237	Xenopus_tropicalis
ENSSDUG00000021871	zc3h3	78	79.352	ENSXCOG00000005025	zc3h3	92	79.352	Xiphophorus_couchianus
ENSSDUG00000021871	zc3h3	99	60.814	ENSXMAG00000006422	zc3h3	99	60.493	Xiphophorus_maculatus