EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000022008 (Gene tree)
Gene ID: 111238755
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 10389 bases
Position: chrBDQW01001588.1:119369-129757
Accession: 111238755
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030555	YTH	PF04146.15	4.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031083	-	2972	XM_022768427	ENSSDUP00000030555	686 (aa)	XP_022624148	UPI000BBE836A

Gene Model

Click here to download ENSSDUG00000022008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022008	ythdc1	59	67.277	ENSG00000083896	YTHDC1	55	61.017	Homo_sapiens
ENSSDUG00000022008	ythdc1	83	87.324	ENSAPOG00000013997	ythdc1	93	80.435	Acanthochromis_polyacanthus
ENSSDUG00000022008	ythdc1	81	86.897	ENSACIG00000019728	ythdc1	90	82.382	Amphilophus_citrinellus
ENSSDUG00000022008	ythdc1	94	92.391	ENSAOCG00000000239	ythdc1	94	92.391	Amphiprion_ocellaris
ENSSDUG00000022008	ythdc1	84	90.988	ENSAPEG00000000618	ythdc1	90	90.988	Amphiprion_percula
ENSSDUG00000022008	ythdc1	89	88.177	ENSATEG00000023007	ythdc1	92	88.328	Anabas_testudineus
ENSSDUG00000022008	ythdc1	92	56.012	ENSAPLG00000009921	YTHDC1	50	67.663	Anas_platyrhynchos
ENSSDUG00000022008	ythdc1	59	67.277	ENSANAG00000001522	YTHDC1	55	61.017	Aotus_nancymaae
ENSSDUG00000022008	ythdc1	94	91.615	ENSACLG00000019371	ythdc1	94	90.994	Astatotilapia_calliptera
ENSSDUG00000022008	ythdc1	94	64.795	ENSAMXG00000006978	ythdc1	57	71.007	Astyanax_mexicanus
ENSSDUG00000022008	ythdc1	59	66.133	ENSBTAG00000015572	YTHDC1	54	56.265	Bos_taurus
ENSSDUG00000022008	ythdc1	59	67.277	ENSCJAG00000009934	YTHDC1	55	61.017	Callithrix_jacchus
ENSSDUG00000022008	ythdc1	59	67.048	ENSCAFG00020027112	YTHDC1	57	57.727	Canis_lupus_dingo
ENSSDUG00000022008	ythdc1	70	55.703	ENSCHIG00000004810	YTHDC1	54	55.181	Capra_hircus
ENSSDUG00000022008	ythdc1	59	67.277	ENSTSYG00000011668	YTHDC1	55	61.017	Carlito_syrichta
ENSSDUG00000022008	ythdc1	91	42.835	ENSCAPG00000008722	YTHDC1	68	44.676	Cavia_aperea
ENSSDUG00000022008	ythdc1	59	59.954	ENSCPOG00000010929	YTHDC1	52	53.365	Cavia_porcellus
ENSSDUG00000022008	ythdc1	94	57.752	ENSCCAG00000035754	YTHDC1	56	61.017	Cebus_capucinus
ENSSDUG00000022008	ythdc1	59	67.225	ENSCATG00000036320	YTHDC1	55	61.017	Cercocebus_atys
ENSSDUG00000022008	ythdc1	92	57.249	ENSCLAG00000005482	YTHDC1	56	60.775	Chinchilla_lanigera
ENSSDUG00000022008	ythdc1	93	59.636	ENSCPBG00000021965	YTHDC1	55	67.076	Chrysemys_picta_bellii
ENSSDUG00000022008	ythdc1	59	67.277	ENSCANG00000004769	YTHDC1	55	61.017	Colobus_angolensis_palliatus
ENSSDUG00000022008	ythdc1	94	56.742	ENSCGRG00001000816	Ythdc1	56	60.775	Cricetulus_griseus_chok1gshd
ENSSDUG00000022008	ythdc1	92	56.805	ENSCGRG00000009807	Ythdc1	56	60.775	Cricetulus_griseus_crigri
ENSSDUG00000022008	ythdc1	94	84.520	ENSCSEG00000020404	ythdc1	94	84.056	Cynoglossus_semilaevis
ENSSDUG00000022008	ythdc1	94	81.056	ENSCVAG00000022349	ythdc1	94	81.085	Cyprinodon_variegatus
ENSSDUG00000022008	ythdc1	94	63.158	ENSDARG00000051953	ythdc1	58	70.025	Danio_rerio
ENSSDUG00000022008	ythdc1	59	67.277	ENSDORG00000013045	Ythdc1	56	61.017	Dipodomys_ordii
ENSSDUG00000022008	ythdc1	65	65.385	ENSETEG00000001878	YTHDC1	52	82.000	Echinops_telfairi
ENSSDUG00000022008	ythdc1	59	67.048	ENSEASG00005018383	YTHDC1	51	67.391	Equus_asinus_asinus
ENSSDUG00000022008	ythdc1	82	70.202	ENSECAG00000018303	YTHDC1	56	67.391	Equus_caballus
ENSSDUG00000022008	ythdc1	94	61.856	ENSELUG00000014029	ythdc1	57	67.703	Esox_lucius
ENSSDUG00000022008	ythdc1	59	67.048	ENSFCAG00000026791	YTHDC1	55	61.501	Felis_catus
ENSSDUG00000022008	ythdc1	75	66.667	ENSFALG00000006581	YTHDC1	81	67.663	Ficedula_albicollis
ENSSDUG00000022008	ythdc1	92	57.481	ENSFDAG00000018560	YTHDC1	56	61.017	Fukomys_damarensis
ENSSDUG00000022008	ythdc1	65	82.819	ENSGMOG00000018815	ythdc1	83	58.206	Gadus_morhua
ENSSDUG00000022008	ythdc1	92	56.024	ENSGALG00000035906	YTHDC1	54	62.228	Gallus_gallus
ENSSDUG00000022008	ythdc1	94	73.820	ENSGACG00000015486	ythdc1	94	73.104	Gasterosteus_aculeatus
ENSSDUG00000022008	ythdc1	93	58.824	ENSGAGG00000007108	YTHDC1	92	56.042	Gopherus_agassizii
ENSSDUG00000022008	ythdc1	59	67.225	ENSGGOG00000021958	YTHDC1	55	61.017	Gorilla_gorilla
ENSSDUG00000022008	ythdc1	94	91.770	ENSHBUG00000019288	ythdc1	94	91.149	Haplochromis_burtoni
ENSSDUG00000022008	ythdc1	94	57.247	ENSHGLG00000006319	-	56	61.017	Heterocephalus_glaber_female
ENSSDUG00000022008	ythdc1	94	56.799	ENSHGLG00100001556	-	56	59.712	Heterocephalus_glaber_male
ENSSDUG00000022008	ythdc1	69	82.143	ENSHCOG00000001520	ythdc1	91	78.286	Hippocampus_comes
ENSSDUG00000022008	ythdc1	94	63.623	ENSIPUG00000018136	ythdc1	58	69.287	Ictalurus_punctatus
ENSSDUG00000022008	ythdc1	59	66.067	ENSSTOG00000013652	YTHDC1	56	59.857	Ictidomys_tridecemlineatus
ENSSDUG00000022008	ythdc1	59	66.268	ENSJJAG00000010268	Ythdc1	57	61.017	Jaculus_jaculus
ENSSDUG00000022008	ythdc1	60	91.262	ENSKMAG00000006483	ythdc1	85	93.086	Kryptolebias_marmoratus
ENSSDUG00000022008	ythdc1	69	91.111	ENSLBEG00000020831	ythdc1	64	91.111	Labrus_bergylta
ENSSDUG00000022008	ythdc1	59	64.108	ENSLACG00000004893	YTHDC1	50	67.391	Latimeria_chalumnae
ENSSDUG00000022008	ythdc1	94	58.298	ENSLOCG00000003045	ythdc1	52	69.755	Lepisosteus_oculatus
ENSSDUG00000022008	ythdc1	94	56.399	ENSLAFG00000021592	YTHDC1	53	74.061	Loxodonta_africana
ENSSDUG00000022008	ythdc1	59	67.225	ENSMFAG00000031927	YTHDC1	55	61.017	Macaca_fascicularis
ENSSDUG00000022008	ythdc1	59	67.277	ENSMMUG00000002265	YTHDC1	56	61.017	Macaca_mulatta
ENSSDUG00000022008	ythdc1	59	67.277	ENSMNEG00000033751	YTHDC1	55	61.017	Macaca_nemestrina
ENSSDUG00000022008	ythdc1	59	67.277	ENSMLEG00000042147	YTHDC1	55	61.017	Mandrillus_leucophaeus
ENSSDUG00000022008	ythdc1	94	86.862	ENSMAMG00000013122	ythdc1	92	89.026	Mastacembelus_armatus
ENSSDUG00000022008	ythdc1	94	91.615	ENSMZEG00005023173	ythdc1	94	90.994	Maylandia_zebra
ENSSDUG00000022008	ythdc1	94	56.788	ENSMAUG00000001286	Ythdc1	56	60.775	Mesocricetus_auratus
ENSSDUG00000022008	ythdc1	94	56.742	ENSMICG00000034640	YTHDC1	92	53.582	Microcebus_murinus
ENSSDUG00000022008	ythdc1	94	57.394	ENSMOCG00000020201	Ythdc1	92	53.577	Microtus_ochrogaster
ENSSDUG00000022008	ythdc1	94	76.577	ENSMMOG00000021200	ythdc1	93	75.526	Mola_mola
ENSSDUG00000022008	ythdc1	64	45.417	ENSMODG00000009173	-	74	50.802	Monodelphis_domestica
ENSSDUG00000022008	ythdc1	97	41.935	ENSMODG00000014337	-	73	60.751	Monodelphis_domestica
ENSSDUG00000022008	ythdc1	95	38.356	ENSMODG00000010076	-	50	51.070	Monodelphis_domestica
ENSSDUG00000022008	ythdc1	84	89.721	ENSMALG00000013412	ythdc1	93	87.852	Monopterus_albus
ENSSDUG00000022008	ythdc1	94	56.799	MGP_CAROLIEiJ_G0027347	Ythdc1	55	60.775	Mus_caroli
ENSSDUG00000022008	ythdc1	94	57.001	ENSMUSG00000035851	Ythdc1	55	60.775	Mus_musculus
ENSSDUG00000022008	ythdc1	94	57.143	MGP_PahariEiJ_G0017126	Ythdc1	55	60.775	Mus_pahari
ENSSDUG00000022008	ythdc1	94	57.143	MGP_SPRETEiJ_G0028339	Ythdc1	55	60.775	Mus_spretus
ENSSDUG00000022008	ythdc1	70	68.949	ENSMPUG00000001743	YTHDC1	60	67.391	Mustela_putorius_furo
ENSSDUG00000022008	ythdc1	73	79.604	ENSNBRG00000007663	ythdc1	87	86.936	Neolamprologus_brichardi
ENSSDUG00000022008	ythdc1	71	70.405	ENSOPRG00000008986	YTHDC1	52	64.151	Ochotona_princeps
ENSSDUG00000022008	ythdc1	94	57.265	ENSODEG00000001715	YTHDC1	56	60.775	Octodon_degus
ENSSDUG00000022008	ythdc1	94	93.182	ENSONIG00000012651	ythdc1	94	91.460	Oreochromis_niloticus
ENSSDUG00000022008	ythdc1	94	53.276	ENSOCUG00000015886	YTHDC1	64	67.391	Oryctolagus_cuniculus
ENSSDUG00000022008	ythdc1	94	82.609	ENSORLG00000030544	ythdc1	95	80.745	Oryzias_latipes
ENSSDUG00000022008	ythdc1	94	83.851	ENSORLG00020019316	ythdc1	95	81.677	Oryzias_latipes_hni
ENSSDUG00000022008	ythdc1	94	78.000	ENSOMEG00000000551	ythdc1	95	77.692	Oryzias_melastigma
ENSSDUG00000022008	ythdc1	59	67.225	ENSPPAG00000041315	YTHDC1	55	61.017	Pan_paniscus
ENSSDUG00000022008	ythdc1	59	66.986	ENSPPRG00000011979	YTHDC1	55	61.501	Panthera_pardus
ENSSDUG00000022008	ythdc1	59	66.507	ENSPTIG00000015527	YTHDC1	56	61.017	Panthera_tigris_altaica
ENSSDUG00000022008	ythdc1	59	67.225	ENSPTRG00000016105	YTHDC1	55	61.017	Pan_troglodytes
ENSSDUG00000022008	ythdc1	59	67.225	ENSPANG00000021590	YTHDC1	55	61.017	Papio_anubis
ENSSDUG00000022008	ythdc1	94	62.170	ENSPKIG00000018497	ythdc1	58	66.744	Paramormyrops_kingsleyae
ENSSDUG00000022008	ythdc1	92	55.233	ENSPSIG00000002782	YTHDC1	50	67.120	Pelodiscus_sinensis
ENSSDUG00000022008	ythdc1	58	73.952	ENSPMGG00000000970	-	77	73.231	Periophthalmus_magnuspinnatus
ENSSDUG00000022008	ythdc1	59	67.048	ENSPEMG00000013850	Ythdc1	56	60.775	Peromyscus_maniculatus_bairdii
ENSSDUG00000022008	ythdc1	94	57.496	ENSPCIG00000006870	YTHDC1	58	61.501	Phascolarctos_cinereus
ENSSDUG00000022008	ythdc1	59	89.163	ENSPFOG00000013404	ythdc1	94	81.832	Poecilia_formosa
ENSSDUG00000022008	ythdc1	59	89.163	ENSPLAG00000011079	ythdc1	85	89.826	Poecilia_latipinna
ENSSDUG00000022008	ythdc1	59	89.163	ENSPMEG00000009238	ythdc1	94	82.143	Poecilia_mexicana
ENSSDUG00000022008	ythdc1	94	69.907	ENSPREG00000016973	ythdc1	90	81.172	Poecilia_reticulata
ENSSDUG00000022008	ythdc1	59	66.819	ENSPPYG00000014726	YTHDC1	55	66.848	Pongo_abelii
ENSSDUG00000022008	ythdc1	94	91.615	ENSPNYG00000011687	ythdc1	94	90.994	Pundamilia_nyererei
ENSSDUG00000022008	ythdc1	94	65.402	ENSPNAG00000028365	ythdc1	92	62.085	Pygocentrus_nattereri
ENSSDUG00000022008	ythdc1	59	66.366	ENSRBIG00000028279	YTHDC1	54	56.020	Rhinopithecus_bieti
ENSSDUG00000022008	ythdc1	59	67.277	ENSRROG00000035028	YTHDC1	55	61.017	Rhinopithecus_roxellana
ENSSDUG00000022008	ythdc1	59	67.225	ENSSBOG00000022353	YTHDC1	55	61.017	Saimiri_boliviensis_boliviensis
ENSSDUG00000022008	ythdc1	94	56.769	ENSSHAG00000002538	YTHDC1	55	67.391	Sarcophilus_harrisii
ENSSDUG00000022008	ythdc1	94	61.890	ENSSFOG00015003298	ythdc1	58	71.182	Scleropages_formosus
ENSSDUG00000022008	ythdc1	94	86.244	ENSSMAG00000009086	ythdc1	94	86.244	Scophthalmus_maximus
ENSSDUG00000022008	ythdc1	100	99.563	ENSSLDG00000007926	ythdc1	100	99.563	Seriola_lalandi_dorsalis
ENSSDUG00000022008	ythdc1	59	65.904	ENSSARG00000010960	YTHDC1	76	60.823	Sorex_araneus
ENSSDUG00000022008	ythdc1	94	55.687	ENSSPUG00000009357	YTHDC1	57	61.259	Sphenodon_punctatus
ENSSDUG00000022008	ythdc1	94	93.333	ENSSPAG00000011449	ythdc1	94	93.643	Stegastes_partitus
ENSSDUG00000022008	ythdc1	59	67.048	ENSSSCG00000035505	YTHDC1	51	65.957	Sus_scrofa
ENSSDUG00000022008	ythdc1	74	79.883	ENSTRUG00000010142	ythdc1	78	79.879	Takifugu_rubripes
ENSSDUG00000022008	ythdc1	97	75.000	ENSTNIG00000013243	ythdc1	61	86.104	Tetraodon_nigroviridis
ENSSDUG00000022008	ythdc1	59	67.048	ENSUAMG00000010388	YTHDC1	60	61.501	Ursus_americanus
ENSSDUG00000022008	ythdc1	92	51.560	ENSUMAG00000013668	YTHDC1	50	57.487	Ursus_maritimus
ENSSDUG00000022008	ythdc1	94	55.848	ENSVPAG00000009040	YTHDC1	92	53.471	Vicugna_pacos
ENSSDUG00000022008	ythdc1	59	67.048	ENSVVUG00000005387	YTHDC1	51	67.391	Vulpes_vulpes
ENSSDUG00000022008	ythdc1	94	57.658	ENSXETG00000017960	ythdc1	57	66.502	Xenopus_tropicalis
ENSSDUG00000022008	ythdc1	52	74.312	ENSXCOG00000000530	ythdc1	82	71.552	Xiphophorus_couchianus
ENSSDUG00000022008	ythdc1	94	81.522	ENSXMAG00000005196	ythdc1	94	81.832	Xiphophorus_maculatus