EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022012 (Gene tree)
Gene ID: 111219614
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 13827 bases
Position: chrBDQW01000068.1:9760832-9774658
Accession: 111219614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030589	TUDOR	PF00567.24	4.4e-112	1	4
ENSSDUP00000030589	TUDOR	PF00567.24	4.4e-112	2	4
ENSSDUP00000030589	TUDOR	PF00567.24	4.4e-112	3	4
ENSSDUP00000030589	TUDOR	PF00567.24	4.4e-112	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031122	-	3306	XM_022742329	ENSSDUP00000030589	1101 (aa)	XP_022598050	-

Gene Model

Click here to download ENSSDUG00000022012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022012's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022012	tdrd1	55	31.683	ENSSDUG00000010811	tdrd7a	50	31.683

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022012	tdrd1	89	33.664	ENSG00000095627	TDRD1	82	34.627	Homo_sapiens
ENSSDUG00000022012	tdrd1	97	70.891	ENSAPOG00000023199	tdrd1	94	71.389	Acanthochromis_polyacanthus
ENSSDUG00000022012	tdrd1	92	32.331	ENSAMEG00000015182	TDRD1	86	32.640	Ailuropoda_melanoleuca
ENSSDUG00000022012	tdrd1	98	68.830	ENSACIG00000010576	tdrd1	92	70.094	Amphilophus_citrinellus
ENSSDUG00000022012	tdrd1	97	74.784	ENSAOCG00000007059	tdrd1	92	69.326	Amphiprion_ocellaris
ENSSDUG00000022012	tdrd1	97	71.019	ENSAPEG00000017049	tdrd1	92	71.469	Amphiprion_percula
ENSSDUG00000022012	tdrd1	97	75.395	ENSATEG00000021627	tdrd1	93	75.539	Anabas_testudineus
ENSSDUG00000022012	tdrd1	88	32.598	ENSAPLG00000012609	TDRD1	91	32.535	Anas_platyrhynchos
ENSSDUG00000022012	tdrd1	85	32.905	ENSACAG00000009854	TDRD1	81	32.905	Anolis_carolinensis
ENSSDUG00000022012	tdrd1	88	34.200	ENSANAG00000035710	TDRD1	80	35.282	Aotus_nancymaae
ENSSDUG00000022012	tdrd1	97	69.273	ENSACLG00000014107	tdrd1	90	69.581	Astatotilapia_calliptera
ENSSDUG00000022012	tdrd1	94	49.261	ENSAMXG00000015146	tdrd1	91	49.261	Astyanax_mexicanus
ENSSDUG00000022012	tdrd1	92	32.167	ENSBTAG00000006855	TDRD1	85	33.166	Bos_taurus
ENSSDUG00000022012	tdrd1	89	34.394	ENSCJAG00000019270	TDRD1	81	35.375	Callithrix_jacchus
ENSSDUG00000022012	tdrd1	93	32.322	ENSCAFG00000011266	TDRD1	86	32.322	Canis_familiaris
ENSSDUG00000022012	tdrd1	92	32.167	ENSCAFG00020012373	TDRD1	86	33.033	Canis_lupus_dingo
ENSSDUG00000022012	tdrd1	92	33.396	ENSCHIG00000012766	TDRD1	85	33.396	Capra_hircus
ENSSDUG00000022012	tdrd1	88	34.292	ENSTSYG00000004935	TDRD1	80	34.292	Carlito_syrichta
ENSSDUG00000022012	tdrd1	88	33.266	ENSCPOG00000004190	TDRD1	84	33.266	Cavia_porcellus
ENSSDUG00000022012	tdrd1	89	33.860	ENSCCAG00000027375	TDRD1	82	33.860	Cebus_capucinus
ENSSDUG00000022012	tdrd1	89	34.263	ENSCATG00000035999	TDRD1	85	34.493	Cercocebus_atys
ENSSDUG00000022012	tdrd1	94	33.333	ENSCLAG00000003935	TDRD1	85	33.333	Chinchilla_lanigera
ENSSDUG00000022012	tdrd1	89	34.356	ENSCSAG00000005071	TDRD1	81	34.356	Chlorocebus_sabaeus
ENSSDUG00000022012	tdrd1	93	43.077	ENSCHOG00000001690	TDRD1	72	43.077	Choloepus_hoffmanni
ENSSDUG00000022012	tdrd1	86	36.479	ENSCPBG00000003780	TDRD1	81	36.479	Chrysemys_picta_bellii
ENSSDUG00000022012	tdrd1	89	34.158	ENSCANG00000035172	TDRD1	86	34.493	Colobus_angolensis_palliatus
ENSSDUG00000022012	tdrd1	90	33.792	ENSCGRG00001004632	Tdrd1	90	33.792	Cricetulus_griseus_chok1gshd
ENSSDUG00000022012	tdrd1	92	33.588	ENSCGRG00000004981	Tdrd1	85	33.588	Cricetulus_griseus_crigri
ENSSDUG00000022012	tdrd1	95	56.645	ENSCSEG00000006983	tdrd1	90	59.211	Cynoglossus_semilaevis
ENSSDUG00000022012	tdrd1	90	58.871	ENSCVAG00000020980	tdrd1	94	59.815	Cyprinodon_variegatus
ENSSDUG00000022012	tdrd1	94	49.067	ENSDARG00000007465	tdrd1	90	49.067	Danio_rerio
ENSSDUG00000022012	tdrd1	92	32.878	ENSDNOG00000012114	TDRD1	83	32.976	Dasypus_novemcinctus
ENSSDUG00000022012	tdrd1	89	33.168	ENSDORG00000009986	Tdrd1	83	33.168	Dipodomys_ordii
ENSSDUG00000022012	tdrd1	85	51.020	ENSETEG00000020143	TDRD1	72	51.020	Echinops_telfairi
ENSSDUG00000022012	tdrd1	93	32.106	ENSEASG00005014802	TDRD1	87	32.106	Equus_asinus_asinus
ENSSDUG00000022012	tdrd1	89	36.082	ENSECAG00000009748	TDRD1	79	36.082	Equus_caballus
ENSSDUG00000022012	tdrd1	88	31.443	ENSEEUG00000010076	TDRD1	80	31.443	Erinaceus_europaeus
ENSSDUG00000022012	tdrd1	95	52.007	ENSELUG00000024364	tdrd1	91	52.007	Esox_lucius
ENSSDUG00000022012	tdrd1	94	33.239	ENSFCAG00000000632	TDRD1	85	33.996	Felis_catus
ENSSDUG00000022012	tdrd1	82	34.118	ENSFALG00000002237	TDRD1	92	34.118	Ficedula_albicollis
ENSSDUG00000022012	tdrd1	93	32.731	ENSFDAG00000013225	TDRD1	87	32.731	Fukomys_damarensis
ENSSDUG00000022012	tdrd1	97	45.981	ENSFHEG00000009203	tdrd1	98	45.981	Fundulus_heteroclitus
ENSSDUG00000022012	tdrd1	80	59.184	ENSGMOG00000016797	-	69	59.184	Gadus_morhua
ENSSDUG00000022012	tdrd1	95	31.356	ENSGALG00000046180	TDRD1	94	31.356	Gallus_gallus
ENSSDUG00000022012	tdrd1	95	59.357	ENSGAFG00000002668	tdrd1	90	59.245	Gambusia_affinis
ENSSDUG00000022012	tdrd1	82	68.810	ENSGACG00000006590	tdrd1	100	68.810	Gasterosteus_aculeatus
ENSSDUG00000022012	tdrd1	89	33.998	ENSGGOG00000004250	TDRD1	81	34.732	Gorilla_gorilla
ENSSDUG00000022012	tdrd1	99	68.440	ENSHBUG00000005216	tdrd1	91	68.386	Haplochromis_burtoni
ENSSDUG00000022012	tdrd1	89	31.485	ENSHGLG00000010877	TDRD1	83	31.485	Heterocephalus_glaber_female
ENSSDUG00000022012	tdrd1	85	34.457	ENSHGLG00100013857	TDRD1	85	34.457	Heterocephalus_glaber_male
ENSSDUG00000022012	tdrd1	98	47.811	ENSHCOG00000002840	tdrd1	93	48.157	Hippocampus_comes
ENSSDUG00000022012	tdrd1	97	51.437	ENSIPUG00000017232	tdrd1	96	52.034	Ictalurus_punctatus
ENSSDUG00000022012	tdrd1	94	34.205	ENSSTOG00000003221	TDRD1	86	34.205	Ictidomys_tridecemlineatus
ENSSDUG00000022012	tdrd1	94	33.676	ENSJJAG00000014720	Tdrd1	86	33.645	Jaculus_jaculus
ENSSDUG00000022012	tdrd1	90	67.341	ENSKMAG00000018558	tdrd1	93	67.341	Kryptolebias_marmoratus
ENSSDUG00000022012	tdrd1	97	73.699	ENSLBEG00000004161	tdrd1	92	71.904	Labrus_bergylta
ENSSDUG00000022012	tdrd1	94	34.547	ENSLACG00000011559	TDRD1	89	34.547	Latimeria_chalumnae
ENSSDUG00000022012	tdrd1	94	40.280	ENSLOCG00000012030	tdrd1	100	42.920	Lepisosteus_oculatus
ENSSDUG00000022012	tdrd1	80	33.775	ENSLAFG00000011575	TDRD1	92	33.775	Loxodonta_africana
ENSSDUG00000022012	tdrd1	89	34.356	ENSMFAG00000043487	TDRD1	85	34.592	Macaca_fascicularis
ENSSDUG00000022012	tdrd1	89	34.356	ENSMMUG00000022517	TDRD1	86	34.653	Macaca_mulatta
ENSSDUG00000022012	tdrd1	89	34.257	ENSMNEG00000031108	TDRD1	82	34.257	Macaca_nemestrina
ENSSDUG00000022012	tdrd1	89	34.257	ENSMLEG00000032281	TDRD1	81	35.251	Mandrillus_leucophaeus
ENSSDUG00000022012	tdrd1	98	74.839	ENSMAMG00000015287	tdrd1	97	74.839	Mastacembelus_armatus
ENSSDUG00000022012	tdrd1	97	69.273	ENSMZEG00005025315	tdrd1	90	69.581	Maylandia_zebra
ENSSDUG00000022012	tdrd1	88	32.759	ENSMGAG00000011067	TDRD1	99	32.759	Meleagris_gallopavo
ENSSDUG00000022012	tdrd1	78	36.321	ENSMAUG00000012164	Tdrd1	78	36.321	Mesocricetus_auratus
ENSSDUG00000022012	tdrd1	92	34.869	ENSMICG00000016190	TDRD1	83	33.592	Microcebus_murinus
ENSSDUG00000022012	tdrd1	92	33.620	ENSMOCG00000022360	Tdrd1	83	34.459	Microtus_ochrogaster
ENSSDUG00000022012	tdrd1	98	66.577	ENSMMOG00000014068	tdrd1	92	68.382	Mola_mola
ENSSDUG00000022012	tdrd1	92	33.081	ENSMODG00000009788	TDRD1	87	33.081	Monodelphis_domestica
ENSSDUG00000022012	tdrd1	97	72.644	ENSMALG00000022115	tdrd1	91	74.437	Monopterus_albus
ENSSDUG00000022012	tdrd1	96	33.454	MGP_CAROLIEiJ_G0023095	Tdrd1	89	33.731	Mus_caroli
ENSSDUG00000022012	tdrd1	92	34.248	ENSMUSG00000025081	Tdrd1	86	34.342	Mus_musculus
ENSSDUG00000022012	tdrd1	97	33.034	MGP_PahariEiJ_G0014583	Tdrd1	90	32.714	Mus_pahari
ENSSDUG00000022012	tdrd1	93	34.011	MGP_SPRETEiJ_G0024016	Tdrd1	88	34.104	Mus_spretus
ENSSDUG00000022012	tdrd1	92	31.238	ENSMPUG00000001987	TDRD1	86	31.238	Mustela_putorius_furo
ENSSDUG00000022012	tdrd1	93	33.022	ENSNGAG00000015231	Tdrd1	87	33.022	Nannospalax_galili
ENSSDUG00000022012	tdrd1	97	68.519	ENSNBRG00000017920	tdrd1	93	68.820	Neolamprologus_brichardi
ENSSDUG00000022012	tdrd1	89	32.735	ENSNLEG00000016228	TDRD1	85	32.735	Nomascus_leucogenys
ENSSDUG00000022012	tdrd1	87	31.976	ENSMEUG00000007717	TDRD1	81	31.976	Notamacropus_eugenii
ENSSDUG00000022012	tdrd1	93	33.428	ENSOPRG00000009180	TDRD1	86	33.428	Ochotona_princeps
ENSSDUG00000022012	tdrd1	96	32.873	ENSODEG00000011965	TDRD1	86	33.113	Octodon_degus
ENSSDUG00000022012	tdrd1	97	69.720	ENSONIG00000016382	tdrd1	92	69.943	Oreochromis_niloticus
ENSSDUG00000022012	tdrd1	88	35.065	ENSOANG00000001562	TDRD1	83	35.065	Ornithorhynchus_anatinus
ENSSDUG00000022012	tdrd1	93	33.175	ENSOCUG00000025327	TDRD1	87	33.175	Oryctolagus_cuniculus
ENSSDUG00000022012	tdrd1	98	57.938	ENSORLG00000004833	tdrd1	93	58.912	Oryzias_latipes
ENSSDUG00000022012	tdrd1	97	58.073	ENSORLG00020019231	tdrd1	93	60.747	Oryzias_latipes_hni
ENSSDUG00000022012	tdrd1	97	58.073	ENSORLG00015017184	tdrd1	92	59.006	Oryzias_latipes_hsok
ENSSDUG00000022012	tdrd1	99	58.100	ENSOMEG00000023637	tdrd1	90	58.922	Oryzias_melastigma
ENSSDUG00000022012	tdrd1	89	33.960	ENSOGAG00000001370	TDRD1	82	33.960	Otolemur_garnettii
ENSSDUG00000022012	tdrd1	92	33.365	ENSOARG00000014200	-	84	33.365	Ovis_aries
ENSSDUG00000022012	tdrd1	89	33.764	ENSPPAG00000041621	TDRD1	81	34.732	Pan_paniscus
ENSSDUG00000022012	tdrd1	94	33.021	ENSPPRG00000000191	TDRD1	85	33.433	Panthera_pardus
ENSSDUG00000022012	tdrd1	93	33.079	ENSPTIG00000010264	TDRD1	86	33.939	Panthera_tigris_altaica
ENSSDUG00000022012	tdrd1	89	33.764	ENSPTRG00000002958	TDRD1	81	34.732	Pan_troglodytes
ENSSDUG00000022012	tdrd1	89	34.158	ENSPANG00000020752	TDRD1	84	34.158	Papio_anubis
ENSSDUG00000022012	tdrd1	89	45.390	ENSPKIG00000010586	tdrd1	86	45.390	Paramormyrops_kingsleyae
ENSSDUG00000022012	tdrd1	90	34.165	ENSPSIG00000014655	TDRD1	83	34.165	Pelodiscus_sinensis
ENSSDUG00000022012	tdrd1	86	53.109	ENSPMGG00000018890	tdrd1	100	53.109	Periophthalmus_magnuspinnatus
ENSSDUG00000022012	tdrd1	92	34.278	ENSPEMG00000004582	Tdrd1	86	34.278	Peromyscus_maniculatus_bairdii
ENSSDUG00000022012	tdrd1	94	32.799	ENSPCIG00000009739	TDRD1	86	34.306	Phascolarctos_cinereus
ENSSDUG00000022012	tdrd1	89	59.658	ENSPFOG00000002145	tdrd1	89	60.327	Poecilia_formosa
ENSSDUG00000022012	tdrd1	96	59.239	ENSPLAG00000010241	tdrd1	89	59.849	Poecilia_latipinna
ENSSDUG00000022012	tdrd1	91	60.767	ENSPMEG00000021893	tdrd1	88	60.767	Poecilia_mexicana
ENSSDUG00000022012	tdrd1	96	60.130	ENSPREG00000022663	tdrd1	89	60.755	Poecilia_reticulata
ENSSDUG00000022012	tdrd1	92	33.101	ENSPPYG00000002671	TDRD1	80	33.101	Pongo_abelii
ENSSDUG00000022012	tdrd1	95	32.481	ENSPCAG00000006692	TDRD1	75	32.481	Procavia_capensis
ENSSDUG00000022012	tdrd1	94	33.211	ENSPCOG00000026619	TDRD1	86	34.415	Propithecus_coquereli
ENSSDUG00000022012	tdrd1	94	33.083	ENSPVAG00000003055	TDRD1	85	33.083	Pteropus_vampyrus
ENSSDUG00000022012	tdrd1	97	68.275	ENSPNYG00000001706	tdrd1	91	68.574	Pundamilia_nyererei
ENSSDUG00000022012	tdrd1	97	50.362	ENSPNAG00000005831	tdrd1	92	50.954	Pygocentrus_nattereri
ENSSDUG00000022012	tdrd1	96	33.945	ENSRNOG00000017064	Tdrd1	85	34.381	Rattus_norvegicus
ENSSDUG00000022012	tdrd1	89	35.183	ENSRBIG00000029668	TDRD1	83	35.183	Rhinopithecus_bieti
ENSSDUG00000022012	tdrd1	89	35.146	ENSRROG00000043379	TDRD1	81	35.146	Rhinopithecus_roxellana
ENSSDUG00000022012	tdrd1	89	34.024	ENSSBOG00000023561	TDRD1	81	34.974	Saimiri_boliviensis_boliviensis
ENSSDUG00000022012	tdrd1	88	33.936	ENSSHAG00000014311	TDRD1	85	33.238	Sarcophilus_harrisii
ENSSDUG00000022012	tdrd1	88	44.467	ENSSFOG00015022020	tdrd1	92	44.467	Scleropages_formosus
ENSSDUG00000022012	tdrd1	98	75.542	ENSSMAG00000019271	tdrd1	97	75.451	Scophthalmus_maximus
ENSSDUG00000022012	tdrd1	99	97.243	ENSSLDG00000006423	tdrd1	100	97.243	Seriola_lalandi_dorsalis
ENSSDUG00000022012	tdrd1	89	34.802	ENSSARG00000008828	TDRD1	65	34.802	Sorex_araneus
ENSSDUG00000022012	tdrd1	86	33.711	ENSSPUG00000005015	TDRD1	84	33.711	Sphenodon_punctatus
ENSSDUG00000022012	tdrd1	97	69.658	ENSSPAG00000018805	tdrd1	93	69.878	Stegastes_partitus
ENSSDUG00000022012	tdrd1	95	31.985	ENSSSCG00000021075	TDRD1	86	32.394	Sus_scrofa
ENSSDUG00000022012	tdrd1	80	34.146	ENSTGUG00000010905	TDRD1	94	34.146	Taeniopygia_guttata
ENSSDUG00000022012	tdrd1	95	60.038	ENSTRUG00000012142	tdrd1	100	59.842	Takifugu_rubripes
ENSSDUG00000022012	tdrd1	87	50.615	ENSTNIG00000018898	tdrd1	100	61.675	Tetraodon_nigroviridis
ENSSDUG00000022012	tdrd1	88	34.859	ENSTBEG00000014978	-	50	34.859	Tupaia_belangeri
ENSSDUG00000022012	tdrd1	94	35.294	ENSTBEG00000014417	-	80	34.152	Tupaia_belangeri
ENSSDUG00000022012	tdrd1	89	31.768	ENSTTRG00000010147	TDRD1	81	31.768	Tursiops_truncatus
ENSSDUG00000022012	tdrd1	92	32.194	ENSUAMG00000009025	TDRD1	86	33.434	Ursus_americanus
ENSSDUG00000022012	tdrd1	92	32.519	ENSUMAG00000000705	TDRD1	86	33.333	Ursus_maritimus
ENSSDUG00000022012	tdrd1	87	33.233	ENSVPAG00000004000	TDRD1	79	33.199	Vicugna_pacos
ENSSDUG00000022012	tdrd1	89	33.464	ENSVVUG00000009750	TDRD1	82	33.464	Vulpes_vulpes
ENSSDUG00000022012	tdrd1	83	61.158	ENSXCOG00000006412	tdrd1	94	60.890	Xiphophorus_couchianus
ENSSDUG00000022012	tdrd1	95	60.902	ENSXMAG00000008104	tdrd1	94	61.148	Xiphophorus_maculatus