EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022035 (Gene tree)
Gene ID: 111221624
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 2-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2816 bases
Position: chrBDQW01000003.1:3987831-3990646
Accession: 111221624
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030592	zf-C2H2	PF00096.26	3.9e-35	1	6
ENSSDUP00000030592	zf-C2H2	PF00096.26	3.9e-35	2	6
ENSSDUP00000030592	zf-C2H2	PF00096.26	3.9e-35	3	6
ENSSDUP00000030592	zf-C2H2	PF00096.26	3.9e-35	4	6
ENSSDUP00000030592	zf-C2H2	PF00096.26	3.9e-35	5	6
ENSSDUP00000030592	zf-C2H2	PF00096.26	3.9e-35	6	6
ENSSDUP00000030592	zf-met	PF12874.7	5.4e-12	1	3
ENSSDUP00000030592	zf-met	PF12874.7	5.4e-12	2	3
ENSSDUP00000030592	zf-met	PF12874.7	5.4e-12	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031125	-	1634	XM_022745081	ENSSDUP00000030592	370 (aa)	XP_022600802	UPI000BBEDB07

Gene Model

Click here to download ENSSDUG00000022035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022035	-	53	43.787	ENSSDUG00000020595	-	87	43.787
ENSSDUG00000022035	-	57	38.983	ENSSDUG00000002675	znf646	63	38.983
ENSSDUG00000022035	-	98	43.956	ENSSDUG00000000786	-	93	50.000
ENSSDUG00000022035	-	81	46.626	ENSSDUG00000020783	-	72	46.626
ENSSDUG00000022035	-	73	54.545	ENSSDUG00000000705	-	89	36.744
ENSSDUG00000022035	-	77	49.708	ENSSDUG00000008943	-	99	49.708
ENSSDUG00000022035	-	85	45.378	ENSSDUG00000004867	-	94	56.923
ENSSDUG00000022035	-	99	55.385	ENSSDUG00000009577	-	99	55.385
ENSSDUG00000022035	-	83	37.126	ENSSDUG00000020788	-	89	37.126
ENSSDUG00000022035	-	62	37.725	ENSSDUG00000019932	ZNF319	93	42.446
ENSSDUG00000022035	-	58	42.775	ENSSDUG00000000496	-	56	42.045
ENSSDUG00000022035	-	53	37.037	ENSSDUG00000010305	-	58	35.000
ENSSDUG00000022035	-	50	46.154	ENSSDUG00000002488	-	86	46.154
ENSSDUG00000022035	-	67	50.847	ENSSDUG00000016450	-	74	48.214
ENSSDUG00000022035	-	50	41.818	ENSSDUG00000019933	snai1a	64	41.818
ENSSDUG00000022035	-	77	47.368	ENSSDUG00000006426	-	99	47.368
ENSSDUG00000022035	-	81	47.273	ENSSDUG00000020810	-	97	47.953
ENSSDUG00000022035	-	78	49.708	ENSSDUG00000015191	-	98	49.708
ENSSDUG00000022035	-	99	44.318	ENSSDUG00000006740	-	100	44.318
ENSSDUG00000022035	-	55	46.377	ENSSDUG00000013904	-	61	46.377
ENSSDUG00000022035	-	77	50.345	ENSSDUG00000009439	-	96	50.345
ENSSDUG00000022035	-	50	49.265	ENSSDUG00000002195	-	93	49.265
ENSSDUG00000022035	-	78	47.727	ENSSDUG00000009563	-	93	47.727
ENSSDUG00000022035	-	51	49.701	ENSSDUG00000015254	-	93	49.701
ENSSDUG00000022035	-	53	44.910	ENSSDUG00000023764	-	95	44.910
ENSSDUG00000022035	-	59	38.971	ENSSDUG00000014574	znf526	50	38.776
ENSSDUG00000022035	-	98	51.724	ENSSDUG00000000838	-	93	49.153
ENSSDUG00000022035	-	83	52.632	ENSSDUG00000005401	-	99	52.632
ENSSDUG00000022035	-	81	42.553	ENSSDUG00000020774	-	81	42.553
ENSSDUG00000022035	-	50	52.695	ENSSDUG00000015204	-	94	52.695
ENSSDUG00000022035	-	84	48.936	ENSSDUG00000000946	-	100	46.286
ENSSDUG00000022035	-	99	46.231	ENSSDUG00000000799	-	85	46.231
ENSSDUG00000022035	-	99	49.286	ENSSDUG00000009553	-	99	49.286
ENSSDUG00000022035	-	99	50.769	ENSSDUG00000015182	-	99	50.769
ENSSDUG00000022035	-	55	40.361	ENSSDUG00000011604	gfi1b	53	40.361
ENSSDUG00000022035	-	62	39.698	ENSSDUG00000012926	-	81	40.230
ENSSDUG00000022035	-	63	44.444	ENSSDUG00000000695	-	78	44.444
ENSSDUG00000022035	-	80	39.568	ENSSDUG00000022701	znf652	68	39.568
ENSSDUG00000022035	-	51	42.012	ENSSDUG00000020397	prdm5	74	42.012
ENSSDUG00000022035	-	55	42.262	ENSSDUG00000016734	-	66	42.262
ENSSDUG00000022035	-	50	49.457	ENSSDUG00000004650	-	97	49.457
ENSSDUG00000022035	-	66	39.157	ENSSDUG00000012745	zbtb16b	53	39.157
ENSSDUG00000022035	-	99	44.915	ENSSDUG00000009425	-	99	44.915
ENSSDUG00000022035	-	50	47.368	ENSSDUG00000009421	-	79	47.368
ENSSDUG00000022035	-	65	49.123	ENSSDUG00000015159	-	89	49.123
ENSSDUG00000022035	-	62	43.810	ENSSDUG00000011170	znf236	50	43.810
ENSSDUG00000022035	-	62	42.593	ENSSDUG00000000871	-	63	42.593
ENSSDUG00000022035	-	50	42.553	ENSSDUG00000006463	-	88	42.553
ENSSDUG00000022035	-	78	50.888	ENSSDUG00000007336	-	98	50.888
ENSSDUG00000022035	-	99	46.939	ENSSDUG00000000905	-	92	46.939
ENSSDUG00000022035	-	76	48.837	ENSSDUG00000015622	-	86	48.837
ENSSDUG00000022035	-	99	38.481	ENSSDUG00000019911	-	98	35.484
ENSSDUG00000022035	-	92	50.877	ENSSDUG00000009534	-	90	50.877
ENSSDUG00000022035	-	59	48.235	ENSSDUG00000020805	-	89	48.235
ENSSDUG00000022035	-	52	35.862	ENSSDUG00000017250	-	52	36.000
ENSSDUG00000022035	-	78	52.795	ENSSDUG00000009601	-	99	52.795

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022035	-	67	44.444	ENSAPOG00000023008	-	76	44.444	Acanthochromis_polyacanthus
ENSSDUG00000022035	-	99	77.151	ENSAPOG00000021966	-	99	77.151	Acanthochromis_polyacanthus
ENSSDUG00000022035	-	56	72.000	ENSACIG00000007096	-	89	72.000	Amphilophus_citrinellus
ENSSDUG00000022035	-	53	47.682	ENSACIG00000022738	-	92	47.682	Amphilophus_citrinellus
ENSSDUG00000022035	-	67	44.444	ENSAOCG00000016409	-	76	44.444	Amphiprion_ocellaris
ENSSDUG00000022035	-	99	79.301	ENSAOCG00000022529	-	100	79.301	Amphiprion_ocellaris
ENSSDUG00000022035	-	99	41.667	ENSAOCG00000001971	-	99	30.241	Amphiprion_ocellaris
ENSSDUG00000022035	-	99	43.750	ENSAOCG00000020652	-	100	43.750	Amphiprion_ocellaris
ENSSDUG00000022035	-	86	32.704	ENSAPEG00000009553	-	85	32.704	Amphiprion_percula
ENSSDUG00000022035	-	58	43.860	ENSAPEG00000008746	-	96	43.860	Amphiprion_percula
ENSSDUG00000022035	-	72	69.189	ENSAPEG00000006572	-	79	69.355	Amphiprion_percula
ENSSDUG00000022035	-	60	43.713	ENSATEG00000022064	-	98	43.353	Anabas_testudineus
ENSSDUG00000022035	-	52	39.167	ENSATEG00000014684	-	89	44.444	Anabas_testudineus
ENSSDUG00000022035	-	63	71.121	ENSATEG00000021602	-	85	71.121	Anabas_testudineus
ENSSDUG00000022035	-	75	46.429	ENSACLG00000006718	-	95	46.429	Astatotilapia_calliptera
ENSSDUG00000022035	-	72	43.624	ENSACLG00000005795	-	86	43.624	Astatotilapia_calliptera
ENSSDUG00000022035	-	54	38.579	ENSACLG00000014365	-	97	38.579	Astatotilapia_calliptera
ENSSDUG00000022035	-	51	47.692	ENSACLG00000001368	-	88	47.692	Astatotilapia_calliptera
ENSSDUG00000022035	-	62	41.250	ENSACLG00000019349	-	69	41.250	Astatotilapia_calliptera
ENSSDUG00000022035	-	62	40.000	ENSACLG00000022482	-	78	40.000	Astatotilapia_calliptera
ENSSDUG00000022035	-	75	46.429	ENSACLG00000020333	-	95	46.429	Astatotilapia_calliptera
ENSSDUG00000022035	-	54	46.018	ENSACLG00000011239	-	69	46.018	Astatotilapia_calliptera
ENSSDUG00000022035	-	56	43.448	ENSACLG00000019482	-	74	43.448	Astatotilapia_calliptera
ENSSDUG00000022035	-	99	68.633	ENSACLG00000008374	-	99	68.633	Astatotilapia_calliptera
ENSSDUG00000022035	-	55	47.143	ENSAMXG00000007973	-	90	42.012	Astyanax_mexicanus
ENSSDUG00000022035	-	54	44.348	ENSCSEG00000019848	-	62	44.348	Cynoglossus_semilaevis
ENSSDUG00000022035	-	78	38.889	ENSCVAG00000020968	-	90	38.889	Cyprinodon_variegatus
ENSSDUG00000022035	-	99	40.909	ENSCVAG00000000161	-	98	40.909	Cyprinodon_variegatus
ENSSDUG00000022035	-	96	39.773	ENSFHEG00000013228	-	97	39.773	Fundulus_heteroclitus
ENSSDUG00000022035	-	100	39.773	ENSFHEG00000003856	-	98	32.095	Fundulus_heteroclitus
ENSSDUG00000022035	-	71	43.275	ENSGAFG00000001481	-	84	43.871	Gambusia_affinis
ENSSDUG00000022035	-	100	39.773	ENSGAFG00000000549	-	98	39.773	Gambusia_affinis
ENSSDUG00000022035	-	55	34.000	ENSGAFG00000007532	-	89	34.000	Gambusia_affinis
ENSSDUG00000022035	-	99	68.097	ENSHBUG00000017924	-	99	68.097	Haplochromis_burtoni
ENSSDUG00000022035	-	55	45.238	ENSHBUG00000020527	-	84	45.238	Haplochromis_burtoni
ENSSDUG00000022035	-	76	44.295	ENSHBUG00000013065	-	84	44.295	Haplochromis_burtoni
ENSSDUG00000022035	-	51	45.143	ENSHBUG00000011944	-	89	36.649	Haplochromis_burtoni
ENSSDUG00000022035	-	50	45.614	ENSHBUG00000009274	-	92	45.614	Haplochromis_burtoni
ENSSDUG00000022035	-	98	46.250	ENSHCOG00000020309	-	97	46.250	Hippocampus_comes
ENSSDUG00000022035	-	54	49.704	ENSIPUG00000022266	ZNF135	77	49.704	Ictalurus_punctatus
ENSSDUG00000022035	-	69	43.077	ENSKMAG00000000802	-	92	43.077	Kryptolebias_marmoratus
ENSSDUG00000022035	-	99	48.780	ENSKMAG00000017903	-	98	48.780	Kryptolebias_marmoratus
ENSSDUG00000022035	-	99	67.385	ENSLBEG00000008850	-	99	67.385	Labrus_bergylta
ENSSDUG00000022035	-	52	40.884	ENSLBEG00000026457	-	99	37.500	Labrus_bergylta
ENSSDUG00000022035	-	53	44.330	ENSLBEG00000008909	-	89	44.330	Labrus_bergylta
ENSSDUG00000022035	-	51	47.692	ENSLOCG00000017422	-	68	47.692	Lepisosteus_oculatus
ENSSDUG00000022035	-	50	37.302	ENSMAMG00000002083	-	92	40.212	Mastacembelus_armatus
ENSSDUG00000022035	-	52	35.714	ENSMZEG00005003951	-	77	35.714	Maylandia_zebra
ENSSDUG00000022035	-	81	43.624	ENSMZEG00005011812	-	86	43.624	Maylandia_zebra
ENSSDUG00000022035	-	50	49.007	ENSMZEG00005025125	-	94	49.007	Maylandia_zebra
ENSSDUG00000022035	-	50	45.882	ENSMZEG00005028563	-	85	45.882	Maylandia_zebra
ENSSDUG00000022035	-	54	45.600	ENSMZEG00005012676	-	89	45.600	Maylandia_zebra
ENSSDUG00000022035	-	82	34.076	ENSMZEG00005025965	-	89	35.350	Maylandia_zebra
ENSSDUG00000022035	-	65	41.667	ENSMZEG00005022884	-	92	42.105	Maylandia_zebra
ENSSDUG00000022035	-	99	68.633	ENSMZEG00005011431	-	99	68.633	Maylandia_zebra
ENSSDUG00000022035	-	54	45.833	ENSMZEG00005020568	-	78	45.833	Maylandia_zebra
ENSSDUG00000022035	-	50	48.361	ENSMZEG00005025725	-	94	48.361	Maylandia_zebra
ENSSDUG00000022035	-	99	40.698	ENSMALG00000012840	-	98	33.775	Monopterus_albus
ENSSDUG00000022035	-	56	39.796	ENSMALG00000010959	-	86	44.509	Monopterus_albus
ENSSDUG00000022035	-	99	75.134	ENSMALG00000005696	-	100	75.775	Monopterus_albus
ENSSDUG00000022035	-	51	46.591	ENSNBRG00000019004	-	80	43.056	Neolamprologus_brichardi
ENSSDUG00000022035	-	50	42.105	ENSNBRG00000024179	-	65	44.048	Neolamprologus_brichardi
ENSSDUG00000022035	-	99	66.398	ENSNBRG00000004792	-	99	66.398	Neolamprologus_brichardi
ENSSDUG00000022035	-	53	45.270	ENSONIG00000020667	-	96	45.270	Oreochromis_niloticus
ENSSDUG00000022035	-	55	43.478	ENSONIG00000001986	-	96	43.478	Oreochromis_niloticus
ENSSDUG00000022035	-	50	40.884	ENSONIG00000012374	-	98	40.884	Oreochromis_niloticus
ENSSDUG00000022035	-	50	44.737	ENSONIG00000014012	-	92	44.737	Oreochromis_niloticus
ENSSDUG00000022035	-	55	44.720	ENSPMGG00000020606	-	88	44.720	Periophthalmus_magnuspinnatus
ENSSDUG00000022035	-	99	35.052	ENSPMGG00000011591	-	99	35.052	Periophthalmus_magnuspinnatus
ENSSDUG00000022035	-	99	47.297	ENSPMGG00000001672	-	93	47.297	Periophthalmus_magnuspinnatus
ENSSDUG00000022035	-	61	42.105	ENSPLAG00000013745	-	83	47.458	Poecilia_latipinna
ENSSDUG00000022035	-	77	50.000	ENSPLAG00000005106	-	92	50.000	Poecilia_latipinna
ENSSDUG00000022035	-	82	46.809	ENSPMEG00000022651	-	95	42.105	Poecilia_mexicana
ENSSDUG00000022035	-	100	40.909	ENSPMEG00000004752	-	98	40.909	Poecilia_mexicana
ENSSDUG00000022035	-	99	68.097	ENSPNYG00000016157	-	99	68.097	Pundamilia_nyererei
ENSSDUG00000022035	-	54	45.506	ENSPNYG00000020737	-	82	45.506	Pundamilia_nyererei
ENSSDUG00000022035	-	72	44.295	ENSPNYG00000011024	-	86	44.295	Pundamilia_nyererei
ENSSDUG00000022035	-	52	44.767	ENSPNYG00000003834	-	83	44.767	Pundamilia_nyererei
ENSSDUG00000022035	-	99	45.763	ENSPNAG00000011705	-	92	45.763	Pygocentrus_nattereri
ENSSDUG00000022035	-	83	42.222	ENSPNAG00000011660	-	70	42.222	Pygocentrus_nattereri
ENSSDUG00000022035	-	71	47.097	ENSSFOG00015006083	-	68	47.097	Scleropages_formosus
ENSSDUG00000022035	-	99	46.591	ENSSMAG00000006902	-	99	46.591	Scophthalmus_maximus
ENSSDUG00000022035	-	99	42.373	ENSSMAG00000006155	-	97	35.602	Scophthalmus_maximus
ENSSDUG00000022035	-	52	59.091	ENSSMAG00000004429	-	95	67.010	Scophthalmus_maximus
ENSSDUG00000022035	-	63	44.516	ENSSMAG00000013663	-	91	44.516	Scophthalmus_maximus
ENSSDUG00000022035	-	100	97.027	ENSSLDG00000025676	-	100	97.027	Seriola_lalandi_dorsalis
ENSSDUG00000022035	-	84	90.286	ENSSPAG00000007691	-	78	90.286	Stegastes_partitus
ENSSDUG00000022035	-	60	46.622	ENSSPAG00000007403	-	93	46.622	Stegastes_partitus
ENSSDUG00000022035	-	55	44.643	ENSSPAG00000008950	-	82	44.643	Stegastes_partitus
ENSSDUG00000022035	-	99	41.071	ENSTRUG00000024009	-	100	41.071	Takifugu_rubripes
ENSSDUG00000022035	-	76	63.345	ENSTRUG00000023491	-	99	63.345	Takifugu_rubripes
ENSSDUG00000022035	-	60	38.938	ENSXCOG00000020769	-	94	38.938	Xiphophorus_couchianus
ENSSDUG00000022035	-	100	39.773	ENSXMAG00000028660	-	98	39.773	Xiphophorus_maculatus
ENSSDUG00000022035	-	59	42.105	ENSXMAG00000022894	-	64	42.105	Xiphophorus_maculatus
ENSSDUG00000022035	-	82	43.275	ENSXMAG00000024973	-	98	43.275	Xiphophorus_maculatus