EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000022162 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF48.2-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3596 bases
Position: chrBDQW01000088.1:9790957-9794552
Accession: 111221445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000030764	zf-C2H2	PF00096.26	1.3e-22	1	4
ENSSDUP00000030764	zf-C2H2	PF00096.26	1.3e-22	2	4
ENSSDUP00000030764	zf-C2H2	PF00096.26	1.3e-22	3	4
ENSSDUP00000030764	zf-C2H2	PF00096.26	1.3e-22	4	4
ENSSDUP00000030764	zf-met	PF12874.7	3.7e-07	1	2
ENSSDUP00000030764	zf-met	PF12874.7	3.7e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000031300	-	3071	XM_022744799	ENSSDUP00000030764	324 (aa)	XP_022600520	-

Gene Model

Click here to download ENSSDUG00000022162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000022162's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000022162	-	50	43.750	ENSSDUG00000020397	prdm5	58	43.750
ENSSDUG00000022162	-	86	44.961	ENSSDUG00000005401	-	97	45.985
ENSSDUG00000022162	-	58	47.126	ENSSDUG00000003003	znf319b	78	47.126
ENSSDUG00000022162	-	73	46.032	ENSSDUG00000015159	-	94	46.032
ENSSDUG00000022162	-	85	52.174	ENSSDUG00000009577	-	85	52.174
ENSSDUG00000022162	-	89	30.104	ENSSDUG00000019911	-	79	30.104
ENSSDUG00000022162	-	51	31.061	ENSSDUG00000001637	scrt2	61	31.061
ENSSDUG00000022162	-	53	41.860	ENSSDUG00000006808	-	83	41.860
ENSSDUG00000022162	-	78	49.296	ENSSDUG00000009439	-	94	49.296
ENSSDUG00000022162	-	52	46.087	ENSSDUG00000000786	-	92	52.308
ENSSDUG00000022162	-	86	51.724	ENSSDUG00000015182	-	87	51.724
ENSSDUG00000022162	-	85	51.111	ENSSDUG00000009534	-	81	51.111
ENSSDUG00000022162	-	81	42.857	ENSSDUG00000020788	-	94	42.857
ENSSDUG00000022162	-	87	44.737	ENSSDUG00000020783	-	70	44.737
ENSSDUG00000022162	-	79	47.414	ENSSDUG00000009563	-	95	47.414
ENSSDUG00000022162	-	50	44.186	ENSSDUG00000015254	-	89	44.186
ENSSDUG00000022162	-	84	47.414	ENSSDUG00000007336	-	99	47.414
ENSSDUG00000022162	-	81	49.138	ENSSDUG00000020810	-	96	49.138
ENSSDUG00000022162	-	78	48.361	ENSSDUG00000000946	-	99	48.361
ENSSDUG00000022162	-	50	36.527	ENSSDUG00000004089	-	95	38.182
ENSSDUG00000022162	-	78	50.394	ENSSDUG00000008943	-	99	50.394
ENSSDUG00000022162	-	78	47.297	ENSSDUG00000006426	-	99	47.297
ENSSDUG00000022162	-	81	39.450	ENSSDUG00000000838	-	78	39.450
ENSSDUG00000022162	-	50	48.624	ENSSDUG00000011244	-	91	48.624
ENSSDUG00000022162	-	85	50.000	ENSSDUG00000009553	-	84	50.000
ENSSDUG00000022162	-	85	44.086	ENSSDUG00000009425	-	81	44.086

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000022162	-	53	46.789	ENSAPOG00000000601	-	79	46.789	Acanthochromis_polyacanthus
ENSSDUG00000022162	-	97	65.287	ENSATEG00000023508	-	66	65.287	Anabas_testudineus
ENSSDUG00000022162	-	85	45.349	ENSATEG00000007658	-	71	42.373	Anabas_testudineus
ENSSDUG00000022162	-	52	49.550	ENSEBUG00000001308	-	67	49.550	Eptatretus_burgeri
ENSSDUG00000022162	-	87	54.545	ENSELUG00000022942	-	89	54.545	Esox_lucius
ENSSDUG00000022162	-	98	32.231	ENSELUG00000000281	-	85	32.514	Esox_lucius
ENSSDUG00000022162	-	85	44.545	ENSELUG00000000423	-	89	44.545	Esox_lucius
ENSSDUG00000022162	-	89	42.336	ENSELUG00000007694	-	91	42.336	Esox_lucius
ENSSDUG00000022162	-	91	46.552	ENSHCOG00000020924	-	92	46.552	Hippocampus_comes
ENSSDUG00000022162	-	91	41.600	ENSHCOG00000019388	-	81	41.600	Hippocampus_comes
ENSSDUG00000022162	-	50	43.590	ENSHCOG00000001318	-	94	46.552	Hippocampus_comes
ENSSDUG00000022162	-	52	43.529	ENSHCOG00000009103	-	54	50.588	Hippocampus_comes
ENSSDUG00000022162	-	81	45.745	ENSHCOG00000015355	-	88	52.941	Hippocampus_comes
ENSSDUG00000022162	-	54	48.246	ENSHCOG00000014781	-	68	48.246	Hippocampus_comes
ENSSDUG00000022162	-	51	45.000	ENSHCOG00000020976	-	57	45.000	Hippocampus_comes
ENSSDUG00000022162	-	50	44.954	ENSORLG00000023809	-	71	44.954	Oryzias_latipes
ENSSDUG00000022162	-	56	50.000	ENSORLG00000023806	-	89	51.020	Oryzias_latipes
ENSSDUG00000022162	-	78	46.552	ENSORLG00000025540	-	64	46.552	Oryzias_latipes
ENSSDUG00000022162	-	81	45.690	ENSORLG00000028456	-	75	45.690	Oryzias_latipes
ENSSDUG00000022162	-	82	48.837	ENSORLG00000029172	-	94	48.837	Oryzias_latipes
ENSSDUG00000022162	-	51	51.064	ENSORLG00000028391	-	88	51.064	Oryzias_latipes
ENSSDUG00000022162	-	78	46.552	ENSORLG00000027053	-	64	46.552	Oryzias_latipes
ENSSDUG00000022162	-	83	47.788	ENSORLG00000026432	-	87	47.788	Oryzias_latipes
ENSSDUG00000022162	-	77	51.136	ENSORLG00000029896	-	95	48.276	Oryzias_latipes
ENSSDUG00000022162	-	78	46.552	ENSORLG00000000557	-	93	46.552	Oryzias_latipes
ENSSDUG00000022162	-	77	53.226	ENSORLG00000027366	-	86	53.226	Oryzias_latipes
ENSSDUG00000022162	-	77	47.126	ENSORLG00000021951	-	96	47.126	Oryzias_latipes
ENSSDUG00000022162	-	50	45.045	ENSORLG00000028381	-	86	46.154	Oryzias_latipes
ENSSDUG00000022162	-	50	49.138	ENSORLG00000013863	-	89	50.000	Oryzias_latipes
ENSSDUG00000022162	-	79	46.552	ENSORLG00000027303	-	98	50.000	Oryzias_latipes
ENSSDUG00000022162	-	52	50.000	ENSORLG00000028433	-	77	50.000	Oryzias_latipes
ENSSDUG00000022162	-	79	47.475	ENSORLG00020009419	-	88	50.000	Oryzias_latipes_hni
ENSSDUG00000022162	-	52	46.610	ENSORLG00020008346	-	81	46.610	Oryzias_latipes_hni
ENSSDUG00000022162	-	78	30.620	ENSORLG00020008424	-	96	39.130	Oryzias_latipes_hni
ENSSDUG00000022162	-	56	45.370	ENSORLG00020011234	-	72	45.370	Oryzias_latipes_hni
ENSSDUG00000022162	-	80	46.667	ENSORLG00015011496	-	96	46.667	Oryzias_latipes_hsok
ENSSDUG00000022162	-	79	48.276	ENSORLG00015012158	-	94	48.276	Oryzias_latipes_hsok
ENSSDUG00000022162	-	83	50.000	ENSORLG00015007986	-	95	50.000	Oryzias_latipes_hsok
ENSSDUG00000022162	-	50	48.598	ENSORLG00015011236	-	65	48.598	Oryzias_latipes_hsok
ENSSDUG00000022162	-	50	42.241	ENSORLG00015012800	-	68	42.241	Oryzias_latipes_hsok
ENSSDUG00000022162	-	57	45.082	ENSORLG00015017097	-	85	45.082	Oryzias_latipes_hsok
ENSSDUG00000022162	-	79	45.833	ENSORLG00015022006	-	99	45.833	Oryzias_latipes_hsok
ENSSDUG00000022162	-	56	49.138	ENSOMEG00000012245	-	58	49.138	Oryzias_melastigma
ENSSDUG00000022162	-	51	46.094	ENSOMEG00000021840	-	88	46.094	Oryzias_melastigma
ENSSDUG00000022162	-	79	43.662	ENSOMEG00000014676	-	94	50.847	Oryzias_melastigma
ENSSDUG00000022162	-	86	50.000	ENSOMEG00000019437	-	93	50.000	Oryzias_melastigma
ENSSDUG00000022162	-	83	53.968	ENSOMEG00000012614	-	78	53.968	Oryzias_melastigma
ENSSDUG00000022162	-	51	47.619	ENSOMEG00000010398	-	85	47.619	Oryzias_melastigma
ENSSDUG00000022162	-	85	54.545	ENSOMEG00000013842	-	90	54.545	Oryzias_melastigma
ENSSDUG00000022162	-	50	49.580	ENSOMEG00000004087	-	65	49.580	Oryzias_melastigma
ENSSDUG00000022162	-	57	49.505	ENSOMEG00000011664	-	62	49.505	Oryzias_melastigma
ENSSDUG00000022162	-	56	45.614	ENSOMEG00000012366	-	85	45.614	Oryzias_melastigma
ENSSDUG00000022162	-	57	45.098	ENSOMEG00000019346	-	99	45.098	Oryzias_melastigma
ENSSDUG00000022162	-	81	45.133	ENSOMEG00000016853	-	96	45.133	Oryzias_melastigma
ENSSDUG00000022162	-	57	45.082	ENSOMEG00000019840	-	68	47.009	Oryzias_melastigma
ENSSDUG00000022162	-	77	45.614	ENSOMEG00000021399	-	81	45.614	Oryzias_melastigma
ENSSDUG00000022162	-	52	47.788	ENSOMEG00000007699	-	93	47.788	Oryzias_melastigma
ENSSDUG00000022162	-	80	41.406	ENSOMEG00000018508	-	91	41.406	Oryzias_melastigma
ENSSDUG00000022162	-	80	47.170	ENSOMEG00000021676	-	96	47.170	Oryzias_melastigma
ENSSDUG00000022162	-	50	46.018	ENSPMGG00000009574	-	76	46.018	Periophthalmus_magnuspinnatus
ENSSDUG00000022162	-	51	48.214	ENSPMGG00000000466	-	97	48.214	Periophthalmus_magnuspinnatus
ENSSDUG00000022162	-	50	44.828	ENSPFOG00000008666	-	98	44.828	Poecilia_formosa
ENSSDUG00000022162	-	85	45.455	ENSPREG00000002615	-	72	45.455	Poecilia_reticulata
ENSSDUG00000022162	-	96	96.154	ENSSLDG00000016879	-	79	96.154	Seriola_lalandi_dorsalis